Mangifera indica (mango): 123222870
Help
Entry
123222870 CDS
T07684
Name
(RefSeq) transcription factor PIF4-like isoform X1
KO
K16189
phytochrome-interacting factor 4
Organism
minc
Mangifera indica (mango)
Pathway
minc04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
minc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
123222870
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
minc03000
]
123222870
Transcription factors [BR:
minc03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
123222870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HLH
bHLH_SAC51
Motif
Other DBs
NCBI-GeneID:
123222870
NCBI-ProteinID:
XP_044501801
LinkDB
All DBs
Position
8:complement(4605094..4609438)
Genome browser
AA seq
546 aa
AA seq
DB search
MNPCIPGWNFEGDLPVTTNQKKPIWPEHDLVELLWENGQVVFNSQTQRKPSLNPNQSRHV
QKQNSRESASYGNSSNLIQDDETISWVQYPLEDSFEKDFYSNFFSELPAGPMETDKHTRQ
FGEEKLVTVAASGLATNSQPSNVTNPVVPGINKNAMPPPRFECHDSVQQDKNLGGLGEAV
NFCQTAAPLMAELGSSNGQFVHRGTRNMTNGEVRECSMMTVGSSHCGSNQVAYDLDMSRG
SSNGAVTTSISPGNCNSDIQKVICQSERAKTETLEATVTSSSGGSGSSFNRTSKQSTGEI
SHKRKSRDARESDCQSDAAELDSAGGNKSSQRSGSCRRSRSAEVHNLSERRRRDRINEKM
RALQELIPHCNKTDKASMLDEAIEYLKSLQLQLQMFQVMWMGSGMTPMMFPGVQHFMSRM
GMGIGPTPLPSINNPMHLSGVSLVDQSMSIAQAHNQAVMCQNSMLNSVNYQNQMQNPNFS
DQYARYMGFHPMQTTSQPINMFRFGPQTVQSPIMSLPSTSCGPFTGGAATDNASQVARQE
SYCYFL
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atgaatccatgtatccctggttggaattttgaaggtgatcttcctgtcaccaccaatcag
aaaaaacccatctggccagaacatgacctagtagagctcttatgggaaaatgggcaggta
gttttcaacagccaaacgcagagaaaaccaagtctgaatcctaatcagtctagacatgtc
caaaaacaaaattcaagggaaagtgcttcatatgggaattcaagtaatttgattcaggat
gatgaaacaatctcatgggttcaatacccgcttgaagattccttcgagaaagacttctat
tcgaattttttctctgaactgccggctggtccgatggagactgataagcacacaagacaa
tttggagaagaaaagttggttacagttgctgcttcaggtttggcaacaaattcacaacct
tcaaatgttaccaatccggttgtccctggaataaacaagaacgcaatgcctcctccaaga
tttgagtgtcatgattcagtccaacaagataaaaatttaggcggtttaggggaagctgtt
aatttttgtcaaaccgcagctcccttgatggccgagctaggatcttctaatggacagttt
gttcacagagggactagaaatatgacaaatggggaggtcagggagtgttcaatgatgaca
gttgggtcaagccattgcggtagcaatcaggttgcatatgatcttgatatgagtcgaggt
tccagcaatggtgcggtgactactagtatatctcctggaaattgcaacagtgacattcag
aaagtaatttgtcagagtgagagagctaaaactgagacacttgaagctactgttacgtcc
tcttctggtggatctggaagtagttttaatagaacaagcaaacaatctactggggagatt
agccacaagaggaagagtagagatgcaagggaatctgattgccaaagtgatgcagctgaa
cttgattcagcaggggggaacaaatcatcccaaagatctggctcttgccgcaggagccgt
tctgctgaagtgcacaatctctcagaaaggagacgaagggataggataaatgagaagatg
agggcattgcaagagctcataccccactgcaacaagacagataaagcatcaatgctagac
gaagcaattgaatacttgaagtctctccagttacaacttcagatgtttcaggtcatgtgg
atgggaagtggcatgacccccatgatgtttccaggagttcagcattttatgtctcgtatg
ggaatgggaatcggtccgacaccgttgccatctataaacaatcctatgcatttgtctggg
gtctctctagttgatcaatccatgtctatagcccaagcgcacaatcaggctgtaatgtgt
caaaattcaatgttgaattcggttaattaccaaaatcagatgcagaatccaaacttctct
gatcaatatgcacgttatatggggtttcaccctatgcaaacgacctctcagcctatcaac
atgttcagatttggtcctcagacagtgcagagtccaataatgtctctgcctagcactagt
tgtggacccttcactggaggagctgcaacagataatgcctcccaagtggccagacaggaa
tcatactgttactttctgtaa
DBGET
integrated database retrieval system
