Macadamia integrifolia (macadamia nut): 122062952
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Entry
122062952 CDS
T07436
Name
(RefSeq) 5'-3' exoribonuclease 4-like isoform X1
KO
K20553
5'-3' exoribonuclease 4 [EC:3.1.13.-]
Organism
ming
Macadamia integrifolia (macadamia nut)
Pathway
ming04016
MAPK signaling pathway - plant
Brite
KEGG Orthology (KO) [BR:
ming00001
]
09130 Environmental Information Processing
09132 Signal transduction
04016 MAPK signaling pathway - plant
122062952
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ming03019
]
122062952
Messenger RNA biogenesis [BR:
ming03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
5' exonucleases
122062952
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XRN_M
XRN_N
zf-CCHC
TonB_N
Motif
Other DBs
NCBI-GeneID:
122062952
NCBI-ProteinID:
XP_042482544
LinkDB
All DBs
Position
Unknown
AA seq
949 aa
AA seq
DB search
MGVPAFYRWLADRYPLSISDVIEEEPSEDANGILLPIDASKPNPNNMEFDNLYLDMNGII
HPCFHPEGKPAPATYDDVFKSIFEYIDHLFSLVRPRRLLYMAIDGVAPRAKMNQQRSRRF
RAAKDAAEAEAEEEGLRKEFEAEGRILSPKEKAETSDSNVITPGTQFMAVLSVALQYYIQ
CRMNHKLGWSFIKVILSDSNVPGEGEHKIMSYIRLQRNLPGFNPNTRHCLYGLDADLIML
SLATHEVHFSILREVISLPGQQEKCFICGQVGHLAAECRGQNADLNEKAIDDTPIHKKKY
QFLNIWVLREYLQYDLEIPNPPFEISFERLVDDFVFLCFFVGNDFLPHMPTLEIREGAIN
LLMYVYKKEFVAMGGYLTDAGEVLLERVEHFVQSVAVYEDQIFQKRARIQKAQENNEEMK
LKMKRENSKVPQMLAVDKVKLGERGYKERYYVEKFEISDPSKIDEVKKDVVLKYVEGLCW
VMRYYYQGVCSWLWYYPYHYAPFASDLKDMEDLEITFFLGEPFKPFDQLMGTLPAASSNA
LPEHYRALMAEPSSPISSFYPADFEIDMNGKRFAWQGVAKLPFIDERKLLAETKKLEDTL
TEEEKARNRMMCDLLYVYDSHPLAKQIISYYLFCYQSAPSVIFPYQIDTDQSGEMNGYIW
LCERNGIKRVVPSPVKGLPYIENNRVLNATYLNPHSHKHIPEPPEGVKIPKKIIKPHDVK
PSPMLWHEDNSGRRSQPRERPLVPRAISGALLGEAAHRLLKNTLQIKANTVNSSGLLYPP
LHRNFHNQTAIRPCPAGPSVYERRFPQDLNNYIGCYNPPQDDITSSRTAPNFHEVQGNRQ
NFRTQDGQPYQEQYDLQTRLAALTMEEGVRSWPHDGVPNTEYPRNLQQPTAWNVGAPPLP
PTNWIDKQRTRNSGMYSRQQETVSNGEKQLKKVYQVKTASTQGDARYWG
NT seq
2850 nt
NT seq
+upstream
nt +downstream
nt
atgggggtgccggcgttttatagatggcttgctgatcgataccctctgtcaatatctgat
gttatcgaagaagaaccttcggaggacgcgaacggcatccttttacccatcgacgcctct
aagccaaatccgaacaacatggaattcgataacctctatttggacatgaatgggattatt
catccttgttttcaccctgaaggcaagcctgctcctgccacctatgatgatgtattcaaa
tcaatattcgagtacattgatcatctcttttcattggtccgcccaagaaggcttctttac
atggcaattgatggagttgcaccaagagctaaaatgaatcagcagcgttcacggcgcttc
agagctgcaaaagatgctgctgaggcagaagctgaagaggaaggactgaggaaggagttt
gaagctgaggggagaattctgagtccgaaggagaaggctgaaacatcagactcaaatgtc
attactccaggcactcaatttatggctgtgttgtctgtagctcttcaatattacattcag
tgtaggatgaaccacaaacttggttggagttttattaaggttattctctctgattcaaat
gttcctggtgagggtgaacacaaaatcatgtcctacatccggttacaacgtaaccttcct
ggttttaatccaaacacgcggcactgtctatatggtttggatgcagatctgatcatgctg
tctttagctactcatgaggttcacttctcaattttgagagaggtgatctccctgccaggg
caacaggagaaatgttttatatgtggtcaagtcggtcatctggctgctgagtgccgtgga
caaaatgccgatttaaatgagaaggcaatagatgacactccaattcacaaaaagaaatat
cagtttctcaatatctgggtgttgcgagagtatttacaatatgatttagagattcccaac
cctccatttgagataagctttgaacgtctagtggatgattttgtttttctctgtttcttt
gttggcaatgactttcttccacacatgccaacattggaaatccgtgagggcgccattaat
ctattgatgtatgtctacaagaaagagtttgttgctatgggtggctatcttacagatgcg
ggtgaggtcttattggaaagagtggaacattttgttcagtcagttgcagtatatgaggac
caaatctttcagaagcgagctcgtattcaaaaggcacaagagaataatgaagagatgaag
cttaaaatgaaaagagagaattccaaggtgcctcagatgttggctgtggataaggtgaaa
ctaggggagcgaggttacaaagagagatactatgttgagaaatttgaaatatcagaccca
agtaaaattgatgaagttaaaaaagatgttgtcttgaagtatgtggagggtctatgctgg
gtcatgcggtattactaccaaggtgtctgctcttggctatggtactatccatatcattat
gctccttttgcttccgatcttaaagatatggaagatctagagatcacatttttcctggga
gaaccatttaaaccctttgatcagcttatgggaacattaccagctgccagttccaatgct
ctgccggaacattacagggcattgatggctgaaccatcatcgccaattagttccttctat
cctgcggattttgagattgacatgaatggtaaacgctttgcatggcagggagttgcaaag
ttgcctttcattgatgagagaaagttgcttgctgaaacaaagaagcttgaggacactttg
acggaagaagaaaaggctcgaaatagaatgatgtgtgatttgctctatgtctatgacagc
catcctttagctaagcaaatcatttcatactatttattctgttatcagtcagctccttcg
gtaatattcccctatcaaattgacacagatcaaagtggtgaaatgaatggctacatttgg
ttatgtgaaagaaatgggattaagcgagtagttccttccccagtcaaggggttgccatac
attgaaaacaatcgtgtcctcaatgctacttatcttaatcctcattcccataagcacatt
ccagaaccgccggaaggtgtaaaaatccccaaaaagattataaaacctcatgacgtaaaa
ccgtcccccatgttatggcatgaagacaacagtggacggcgttcacaacccagagagagg
ccactggtaccacgggctatatctggtgctctcttgggagaagcagctcatcggcttctt
aaaaacacacttcaaatcaaggctaacacagtgaactcctctggattgttgtatccccca
ctccacaggaatttccataaccagacggccattaggccttgtccagctggaccttccgta
tatgaaagaagatttcctcaggacctgaataattacattgggtgttacaaccctcctcaa
gatgacattactagctcaagaacagctcctaatttccatgaggtgcaaggcaacagacag
aattttaggacacaggatgggcaaccgtatcaagaacaatatgacttgcaaaccaggctg
gctgccttgacgatggaggaaggtgtgagatcttggccacatgatggagtgccaaatact
gaatacccacgaaacctacagcagccaactgcttggaatgtgggcgccccacctttgcca
ccgaccaattggattgacaagcaacgaactagaaattctggcatgtattctagacaacag
gaaactgtctccaatggtgagaagcagctgaagaaggtttatcaagttaagacagcgagc
acccaaggagatgccagatactggggatga
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