Macadamia integrifolia (macadamia nut): 122068770
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Entry
122068770 CDS
T07436
Name
(RefSeq) ABC transporter I family member 20
KO
K12608
CCR4-NOT complex subunit CAF16
Organism
ming
Macadamia integrifolia (macadamia nut)
Pathway
ming03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ming00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
122068770
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ming03019
]
122068770
Messenger RNA biogenesis [BR:
ming03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
122068770
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
AAA_29
AAA
AAA_15
Arf
ORC-CDC6-like
Zeta_toxin
AAA_22
nSTAND3
AAA_30
AAA_23
AAA_25
AAA_7
AAA_16
AAA_28
Motif
Other DBs
NCBI-GeneID:
122068770
NCBI-ProteinID:
XP_042488588
LinkDB
All DBs
Position
Unknown
AA seq
330 aa
AA seq
DB search
MSEEGEEKRPMVEINNLKFTYPGIDGHPPPGSTPLIEGFSLSLNSGERCLLVGSNGAGKT
TILRILGGKHMVERHMVRVLGRSAFHDTALTSSGDLCYLGGEWKRDVAFAGFEVSIQMDI
SAEKMIFGVSCVDPQRRAELIKVLDIDLSWRMHKSSDGQRRRVQICMGLLKPFKVLLLDE
ITVDLDVLGRADLLKFLRKECEERGATIIYATHIFDGLEDWPSHIVYVAHGKLQLAMPMQ
KVKEMSSLSLMRTVESWLRKERDEERKRRKERKASGLLEFEKQVEGSRVIGDPARSGVRA
MNNGWAAGRLHSTIAGEENFFYSSNSILRQ
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaggaaggggaggagaagagaccaatggtggaaatcaacaatctcaagttcaca
tatcccggcatcgatggccatcctccacctggatcaacccctttgatcgaaggcttctct
ctgtctctcaattccggcgaacgttgccttctcgtcggttctaatggagctggaaaaaca
acaattctgagaatacttggagggaaacacatggtggagcgtcacatggttcgtgttctc
ggcagatctgccttccacgataccgccttgacgtcgtccggcgatctctgttatctcggc
ggagagtggaagcgagatgttgcatttgctggctttgaggtttccattcaaatggatatt
tctgctgagaaaatgatatttggggtttcatgtgtcgatcctcaaaggagagccgaactc
attaaggtgttagatattgacctgtcatggagaatgcacaaatcatctgatggtcagaga
agacgagttcaaatttgtatgggtctcctcaaaccattcaaggttcttctccttgatgag
ataacagttgaccttgatgtgctaggaagagctgaccttttgaaattcctcagaaaggaa
tgcgaagagcgaggtgctacaattatatatgcaacccatatattcgatggccttgaggat
tggccatcacatattgtttatgttgctcatgggaagttacaattagcaatgccaatgcag
aaggttaaggagatgagcagtttgtcgcttatgagaaccgtggagagttggctgaggaag
gagagggatgaagagagaaagagaaggaaagaaaggaaagcgagtggtcttttggagttt
gaaaagcaagtagagggaagtcgagtgattggggaccctgctcgtagtggtgttcgtgca
atgaataatggttgggccgcagggaggcttcactctactatagcaggtgaggagaatttc
ttctacagctcaaacagcattctgaggcagtag
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integrated database retrieval system
