Macadamia integrifolia (macadamia nut): 122091826
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Entry
122091826 CDS
T07436
Name
(RefSeq) 5'-3' exoribonuclease 4-like
KO
K20553
5'-3' exoribonuclease 4 [EC:3.1.13.-]
Organism
ming
Macadamia integrifolia (macadamia nut)
Pathway
ming04016
MAPK signaling pathway - plant
Brite
KEGG Orthology (KO) [BR:
ming00001
]
09130 Environmental Information Processing
09132 Signal transduction
04016 MAPK signaling pathway - plant
122091826
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ming03019
]
122091826
Messenger RNA biogenesis [BR:
ming03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
5' exonucleases
122091826
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
XRN_M
XRN_N
zf-CCHC
Motif
Other DBs
NCBI-GeneID:
122091826
NCBI-ProteinID:
XP_042517924
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All DBs
Position
10:19522119..19537669
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AA seq
941 aa
AA seq
DB search
MGVPAFYRWLADRYPLSISDVIEEEPSEDANGFLLPIDVSKPNPNNIEFDNLYLDMNGII
HPCFHPEGKPAPVTYDEVYKSIFEYIDHIFSLVRPRKLLYLAIDGVAPRAKMNQQRSRRF
RAAKDASEAEAEEKRLKKEFEAEGRILTPKESAETSDSNVITPGTQFMAVLSVALQYYIQ
CRLNHNSGWRCIKVLLSDANVPGEGEHKIMSYIRLQRNLPGFNPNMRHCLYGLDADLIML
SLATHEVHFSILREVISLPGQQEKCFICGQVGHLAAECRGTEQDTDSNNKAIDDTPIHKK
KYQFLNIWVLREYLQFDLEIPDPPFEINFERIVDDFVFLCFFVGNDFLPHMPTLEIREGA
INLLMFVYKKEFTAMGGYLTDAGEVLLERVEYFIQKVAVYEDQIFRKRARIQQAFENNEA
MKLKMRRENSEEPQTLAVDKVKLGEPGYKERYYVEKFEISDPEKIDEVKKDIVLMYVEGL
CWVMRYYYKGVCSWLWYYPYHYAPFASDLKGLADLEITFFPGQPFKPFDQLMGTLPAASS
NALPEHYGALMTGTSSPISSFYPADFEIDMNGKRFAWQGIAKLPFIDERKLLAETKKLED
TLTDEEKARNRMMYDLLYVYEKHPLARQIFSYYSCCCQSPSKIFASEIDTDKSGGMNGYI
WLCERNGFKQIVPSPVKGLPNIQNNHVLNVTYLYPQPHNHIPEPPEGVKMPKKVIKPYDI
KPFPMLWHEDNSGRRSQPRERPQVPRAISGPLLGEAAHRLLKNTLQITANTTTSSAILEP
PHYRNFPNHRVNRPRPRPAGPSGYENGCTQNLNYYNGHYNHPQGAMTSSRSAPSFHELQG
NRQNLRAQDTLPHQEQYNLHTGLATMTIEERARSRPHQGMPPGMLNVGYSPNQQYSTGWN
VSFPPLPPNNWIDKQPIGNEAMYFRQQETVSHGEAGDGLSN
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
atgggagttccagctttctatagatggcttgccgatcgataccctttgtcaatttctgat
gtaattgaagaagagccttcggaggatgcaaatggcttccttttacctatcgatgtctct
aagccaaatccgaacaacatcgaatttgacaatctttacttggatatgaacgggatcatt
catccttgttttcaccctgaaggcaaacctgcgcctgtcacctatgatgaagtatataaa
tcaatatttgagtatatcgatcatattttttcactggtccgcccaagaaagctcctttac
ctggcgattgatggagttgcaccaagagctaaaatgaatcagcagcgttcacggcgcttc
agagcagcaaaagatgcttctgaagcagaagcggaagagaaaagactgaagaaggaattt
gaagcagaggggagaattctgactcctaaggagagtgctgaaacatcggattcaaatgtc
atcactccaggcactcaatttatggctgtgttgtctgtagctcttcagtattacatacag
tgtaggctgaaccacaactctggttggaggtgtattaaggttttgctctctgatgcaaat
gttcctggagagggtgaacacaaaatcatgtcctacatccggttacaacgcaaccttcca
ggttttaatccaaacatgcggcactgtctatatggtttggatgcagatctgatcatgctg
tctttagctactcatgaggttcacttctcaattttaagagaggtgatctccctgccaggg
caacaggagaaatgttttatttgtggtcaagttggtcatctggctgctgagtgccgtgga
acggaacaagatacagattcaaataataaggcaatagatgacaccccaattcacaaaaag
aaatatcagtttctcaatatctgggtattgcgagagtatttacagtttgatttagagatt
cccgacccgccgtttgagataaactttgaacgaatagttgatgattttgtttttctttgc
ttctttgttggcaatgactttcttccacacatgccaacgttggaaatccgggagggtgcc
attaatctactgatgtttgtctacaagaaggagtttactgctatgggtggttatcttaca
gatgcgggtgaggtcttattggaaagggtagaatattttattcagaaagttgcagtatat
gaggaccaaatatttcggaagcgggctcgtattcaacaggcgtttgagaataacgaagca
atgaagcttaaaatgagaagagagaattctgaggagcctcagactttggctgtggataag
gtgaaactaggggagccaggttacaaagagagatactatgttgagaaatttgaaatatca
gatccagagaaaattgatgaagttaaaaaggatattgtcttgatgtatgtggagggtcta
tgctgggtcatgcggtattactacaaaggtgtctgctcttggctatggtactatccatat
cactatgctccttttgcttccgatcttaaaggtttggcagatctggagatcacatttttc
ccaggacaaccatttaaaccctttgatcaacttatgggaaccttaccagctgcaagttcc
aatgctcttcctgaacattatggggcattgatgactggcacatcatcaccaattagttcc
ttttaccctgcagattttgagattgacatgaatggtaaacgctttgcatggcagggtata
gcaaagttgccattcattgatgagagaaagttgcttgctgaaacaaagaagcttgaggac
actttgacggatgaagaaaaggctcgtaatagaatgatgtatgatttgctatatgtctat
gagaaacatcctttggcaagacaaattttttcatactatagctgctgttgtcagtcacct
tcgaaaatattcgcctccgaaattgacacagataaaagtggtggaatgaatggctatatt
tggctatgcgaaagaaatgggtttaagcaaatagttccttccccagttaaggggttgcca
aacattcaaaacaatcacgtcctcaatgttacttatctttatccgcagcctcataatcac
attccagaacctccggaaggtgttaaaatgcccaaaaaggttataaaaccttatgacata
aaacccttccccatgttatggcatgaagacaacagtggacggcgttcacaacccagagag
aggccacaggtaccacgggcaatatctggtcctctcttgggagaagcagctcatcgactg
cttaaaaacacacttcaaatcacagctaacaccaccacttcctcggcaatattagaaccc
ccacattacaggaatttccctaaccacagagtcaataggcctaggcctaggccggctgga
ccttctgggtatgaaaatggatgtactcagaaccttaattattataatgggcattacaac
catcctcaaggtgccatgactagctcaagatcagccccctctttccatgagctgcaaggt
aacagacaaaatttaagggcacaggatacgctaccgcatcaagaacaatataacttgcac
acagggctggctaccatgacgattgaagaaagggcgagatctcggccacaccaggggatg
ccaccagggatgctgaatgttggatactcgccaaatcaacagtattcgaccggctggaat
gtgagcttccctcctttgccgcccaacaattggattgacaagcaaccaattggaaatgaa
gccatgtattttagacaacaggaaactgtgtcccatggtgaagcaggcgacggtttatca
aattaa
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