Micromonas commoda: MICPUN_109515
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Entry
MICPUN_109515 CDS
T02695
Name
(RefSeq) predicted protein
KO
K12608
CCR4-NOT complex subunit CAF16
Organism
mis
Micromonas commoda
Pathway
mis03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mis00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MICPUN_109515
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mis03019
]
MICPUN_109515
Messenger RNA biogenesis [BR:
mis03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
MICPUN_109515
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
TsaE
AAA_25
AAA_29
AAA_28
AAA_23
RsgA_GTPase
NACHT
nSTAND3
Zeta_toxin
AAA
AAA_30
Arf
AAA_16
AAA_15
PduV-EutP
ATP-synt_ab
Motif
Other DBs
NCBI-GeneID:
8249191
NCBI-ProteinID:
XP_002506054
JGI:
MicpuN3_109515
UniProt:
C1EHK2
LinkDB
All DBs
Position
14:788553..789443
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AA seq
296 aa
AA seq
DB search
MNAPAGVKAEAAAATDAAPSLVISNLNYAYPMGEKIIKDFSLTLPPGSRCLLSGANGAGK
TTLLQVLAGKTMVPTEDVRVIGRPPFHDTELTCSGDLAYLGAQWRRNVGSAGSVPLAGDI
SAGKMIFGVEGIDKNRRADLIDILDIDVDWNMMRVSDGQRRRVQICMGLLKPFKVLLCDE
ITVDLDILGRLDLLNFLKQECEQRGATVVYATHIFDGMEPWMTHIAFTSDGKLVHGGKKE
DVGDLKGVRHLLSTVYDWLVVDRNDRKEREKLEKANPKPKSSLESRFGSRHMAYYR
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcacctgcaggtgtcaaggctgaggccgccgctgccacagacgcggcgcccagc
ctggtcatctccaacctgaactacgcgtacccgatgggcgaaaagatcatcaaggacttc
tcactcaccctccctcccggttcgcgatgcctgctgtcgggcgcgaacggcgcgggcaag
accacgctgctccaggtcctcgccggcaagaccatggtgcccaccgaggacgtccgcgtc
atcgggcgtccccccttccacgacaccgaactgacctgctccggcgacctcgcgtacctc
ggagcgcagtggcgtcgcaacgtgggcagcgccgggtccgttcctctggcgggtgacatc
agcgcgggtaagatgatcttcggcgtggagggcatcgacaagaaccgcagggctgacctc
atcgatatcctcgacatagacgtcgactggaacatgatgcgggtcagcgacggccaaaga
cggcgggtccagatctgcatgggcctcctcaagcctttcaaggtgttgctgtgcgacgag
atcaccgttgaccttgacatcctgggccggttggacctcctgaactttttgaagcaagag
tgcgagcaacggggtgcgactgtggtgtacgccacgcacatcttcgacggcatggaaccg
tggatgacccacatcgcgttcaccagcgacggcaagctggtgcacggcgggaagaaggag
gacgtcggcgatctgaagggggtcaggcacctcttatcgacggtgtacgactggctggtg
gtggacaggaacgacaggaaggaacgcgagaagctggagaaagcgaaccccaagcccaaa
tccagcctggagagcaggttcgggtccagacacatggcgtattaccgatga
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