Micromonas commoda: MICPUN_113936
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Entry
MICPUN_113936 CDS
T02695
Symbol
RBX1
Name
(RefSeq) E3 ubiquitin ligase Rbx1
KO
K03868
E3 ubiquitin-protein ligase RBX1 [EC:
2.3.2.32
]
Organism
mis
Micromonas commoda
Pathway
mis03420
Nucleotide excision repair
mis04120
Ubiquitin mediated proteolysis
mis04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
mis00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
MICPUN_113936 (RBX1)
04120 Ubiquitin mediated proteolysis
MICPUN_113936 (RBX1)
09124 Replication and repair
03420 Nucleotide excision repair
MICPUN_113936 (RBX1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mis04121
]
MICPUN_113936 (RBX1)
03400 DNA repair and recombination proteins [BR:
mis03400
]
MICPUN_113936 (RBX1)
Enzymes [BR:
mis01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.32 cullin-RING-type E3 NEDD8 transferase
MICPUN_113936 (RBX1)
Ubiquitin system [BR:
mis04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
MICPUN_113936 (RBX1)
Multi subunit type E3
SCF complex
Ring finger protein
MICPUN_113936 (RBX1)
Cul2 complex
MICPUN_113936 (RBX1)
Cul3 complex
MICPUN_113936 (RBX1)
Cul4 complex
MICPUN_113936 (RBX1)
Cul7 complex
MICPUN_113936 (RBX1)
Cul8 complex
MICPUN_113936 (RBX1)
Cul9 complex
MICPUN_113936 (RBX1)
DNA repair and recombination proteins [BR:
mis03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
MICPUN_113936 (RBX1)
TCR (transcription coupled repair) factors
Cul4-CSA complex
MICPUN_113936 (RBX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-rbx1
zf-RING_2
zf-ANAPC11
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-RING_5
zf-C3HC4_3
zf-RING_16
zf-C3HC4_4
zf-RING-like
zf-Nse
zf-RING_11
PHD_NSD
Prok-RING_4
zf-RING_10
zf-RING_6
zf-RING_Vps41
Rtf2
zinc_ribbon_16
Motif
Other DBs
NCBI-GeneID:
8250418
NCBI-ProteinID:
XP_002507100
JGI:
MicpuN3_113936
UniProt:
C1FDA6
LinkDB
All DBs
Position
1:join(419248..419283,419342..419554,419611..419973)
Genome browser
AA seq
203 aa
AA seq
DB search
MATHKKNFEVKRWNAVAVWSWSICTDTCAICRNSLHEPSIEYQANPSSASEEGLSIAWGN
CGHVFHLDCISKWLRTRSNCPLCNKEWEFAKIEKVRMHDIYLLAEGLACIHRSIIPHMTL
NTDTTPCHGGRWMIIFFNLKPAVFAEESYKTNSSKACPAYFFLERVISCSRRCHPTGRDN
FPRASVECYWHGTKNGKSGFPHD
NT seq
612 nt
NT seq
+upstream
nt +downstream
nt
atggcgacacataagaaaaactttgaagtaaaaaggtggaacgcagttgccgtgtggtct
tggtcaatttgcaccgatacttgcgctatttgccgtaacagtttgcatgaaccaagcatc
gaatatcaggcaaatccatcttcagcgtcagaagaaggtctgagcattgcctggggtaac
tgtgggcatgttttccacctcgattgcatatcgaaatggctgcgtacccgaagcaactgt
cctctttgtaacaaagagtgggaatttgcgaagatcgaaaaggtacgaatgcatgacata
tatttgttggcggaaggcctcgcttgtattcaccgatcaattattccgcatatgacccta
aacacggatacaactccctgtcatggggggagatggatgataatttttttcaacctgaaa
ccagcagtgtttgccgaagaatcatataaaaccaactcttcaaaagcttgccctgcgtac
tttttcttggagcgtgtaatttcctgttctcgtcgctgccacccaaccggtcgagataac
ttcccacgagcaagtgtagaatgttattggcacgggacaaaaaatggaaagagtgggttc
ccacatgattga
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integrated database retrieval system
