KEGG   Micromonas commoda: MICPUN_79954
Entry
MICPUN_79954      CDS       T02695                                 
Name
(RefSeq) predicted protein
  KO
K10260  F-box and WD-40 domain protein 7
Organism
mis  Micromonas commoda
Pathway
mis04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:mis00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    MICPUN_79954
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:mis04131]
    MICPUN_79954
   04121 Ubiquitin system [BR:mis04121]
    MICPUN_79954
Membrane trafficking [BR:mis04131]
 Autophagy
  Mitophagy
   Other mitophagy associated  proteins
    MICPUN_79954
Ubiquitin system [BR:mis04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Target recognizing subunit (F-box)
     MICPUN_79954
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz Beta-prop_TEP1_C WD40_WDHD1_1st WDR55 Beta-prop_TEP1_2nd Beta-prop_WDR75_1st Beta-prop_SCAP EIF3I Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 Beta-prop_WDR90_POC16_2nd Beta-prop_EML Beta-prop_SPT8 WD40_MABP1-WDR62_2nd Beta-prop_DCAF4 NBCH_WD40 Beta-prop_Nup120_160 PQQ_3 U-box Beta-prop_IP5PC_F Beta-prop_IFT122_1st WD_LRWD1 WD40_MABP1-WDR62_1st Beta-prop_LRRK2 WDR90_beta-prop_4th zf-Nse PQQ_2 Cytochrom_D1 KNTC1_N zf-rbx1
Other DBs
NCBI-GeneID: 8242242
NCBI-ProteinID: XP_002500626
JGI: MicpuN3_79954
UniProt: C1E2A9
LinkDB
Position
3:1151457..1152719
AA seq 420 aa
MVATGHTYDRPSIKRWLEQGHKTCPVTGSRLRNLDLLPNFALRSAISEWAAANNVKLNDR
QLTSVTEKAVGGTDGESDAQTSPHCVLEGHEEIVWAVEATDGHLFSASADKSIRAWDTKT
RRCVHVLEEHTRPVLSLVVSQLHGKLFSGSYDCSICVWDLVTFRRIKSLHGHTDAVRSLA
VAGDTLFSASYDSTLRAYDINTLKPLKVLEGHTGPVRTLTVLGAHLFSGSYDYTVRVWHT
ETLEPVHVLEGHTDAVRALAASPVPELKYIFSGSDDNSVRVWDANTFKCVSVFQGHEDNV
RVLTADSRYLYSGSWDKTIRVWDTQSLECVRVLEGHMEAVLALTVMRGHLISGSYDTTVR
FWNTETFQCVGKFEGHDDAVRVLTSTGEDAESVYSGSYDGSIGFWSLPAPTSNTRAPATR
NT seq 1263 nt   +upstreamnt  +downstreamnt
atggttgccaccggccacacgtacgataggcctagtatcaagcgctggttggagcagggg
cacaagacgtgtccggtcacgggcagtcgcctcagaaacttggaccttctgcccaacttc
gcgcttcgtagcgctatttcggagtgggcggccgcgaataacgtcaagctcaacgacagg
cagctcacgagcgtgactgagaaggcggttgggggcaccgacggcgagtccgacgcgcag
accagccctcactgcgtgctcgaggggcacgaggagatcgtatgggcggtggaggcgacg
gatgggcacctgtttagcgcctccgcggacaagtcgatccgcgcttgggacaccaagacg
cgccggtgcgtgcacgtgctggaggagcacaccaggccagtgctctcgctggtggtgagt
caactgcacggcaagctcttctctggatcctacgactgcagcatatgcgtgtgggacctc
gtcacattcaggcgcataaagtccctgcacggacacacggacgccgtacgttcgttggcg
gtggctggggacacgctcttcagtgcctcgtacgattcaaccctacgggcgtacgacatc
aacacgctgaagcccctcaaggtgctggagggtcacaccggcccggtgcgtacactcacc
gtccttggcgcgcacctgttctcgggttcgtacgattacaccgtgagggtgtggcacacg
gagactttggagcccgtgcacgtgctcgagggtcacaccgatgcggtcagggcactcgcg
gcatcgccagtgcctgagctcaagtacatcttctcaggatcggacgacaactccgtccgg
gtatgggacgcgaacacgttcaagtgcgtgagcgttttccagggccacgaggataacgtg
agagtactgacagcggacagccgctacctttacagcggctcatgggacaagactatccgt
gtttgggacactcagtcgcttgagtgtgttcgcgtgctggagggccacatggaggctgtg
ttggcgctcacggtgatgcgaggccacctgattagtgggtcctacgacaccactgtcagg
ttttggaacacggaaacgttccagtgtgtggggaagttcgaaggtcacgacgacgcggtt
cgagtgctcacctccacgggggaggatgccgagagcgtgtacagcgggtcctacgacggg
agcatcgggttctggtcgctgcccgcaccgacctccaacacgcgagcacctgcaacacgc
tga

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