Micromonas commoda: MICPUN_79954
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Entry
MICPUN_79954 CDS
T02695
Name
(RefSeq) predicted protein
KO
K10260
F-box and WD-40 domain protein 7
Organism
mis
Micromonas commoda
Pathway
mis04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
mis00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
MICPUN_79954
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mis04131
]
MICPUN_79954
04121 Ubiquitin system [BR:
mis04121
]
MICPUN_79954
Membrane trafficking [BR:
mis04131
]
Autophagy
Mitophagy
Other mitophagy associated proteins
MICPUN_79954
Ubiquitin system [BR:
mis04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
MICPUN_79954
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_TEP1_C
WD40_WDHD1_1st
WDR55
Beta-prop_TEP1_2nd
Beta-prop_WDR75_1st
Beta-prop_SCAP
EIF3I
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_SPT8
WD40_MABP1-WDR62_2nd
Beta-prop_DCAF4
NBCH_WD40
Beta-prop_Nup120_160
PQQ_3
U-box
Beta-prop_IP5PC_F
Beta-prop_IFT122_1st
WD_LRWD1
WD40_MABP1-WDR62_1st
Beta-prop_LRRK2
WDR90_beta-prop_4th
zf-Nse
PQQ_2
Cytochrom_D1
KNTC1_N
zf-rbx1
Motif
Other DBs
NCBI-GeneID:
8242242
NCBI-ProteinID:
XP_002500626
JGI:
MicpuN3_79954
UniProt:
C1E2A9
LinkDB
All DBs
Position
3:1151457..1152719
Genome browser
AA seq
420 aa
AA seq
DB search
MVATGHTYDRPSIKRWLEQGHKTCPVTGSRLRNLDLLPNFALRSAISEWAAANNVKLNDR
QLTSVTEKAVGGTDGESDAQTSPHCVLEGHEEIVWAVEATDGHLFSASADKSIRAWDTKT
RRCVHVLEEHTRPVLSLVVSQLHGKLFSGSYDCSICVWDLVTFRRIKSLHGHTDAVRSLA
VAGDTLFSASYDSTLRAYDINTLKPLKVLEGHTGPVRTLTVLGAHLFSGSYDYTVRVWHT
ETLEPVHVLEGHTDAVRALAASPVPELKYIFSGSDDNSVRVWDANTFKCVSVFQGHEDNV
RVLTADSRYLYSGSWDKTIRVWDTQSLECVRVLEGHMEAVLALTVMRGHLISGSYDTTVR
FWNTETFQCVGKFEGHDDAVRVLTSTGEDAESVYSGSYDGSIGFWSLPAPTSNTRAPATR
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atggttgccaccggccacacgtacgataggcctagtatcaagcgctggttggagcagggg
cacaagacgtgtccggtcacgggcagtcgcctcagaaacttggaccttctgcccaacttc
gcgcttcgtagcgctatttcggagtgggcggccgcgaataacgtcaagctcaacgacagg
cagctcacgagcgtgactgagaaggcggttgggggcaccgacggcgagtccgacgcgcag
accagccctcactgcgtgctcgaggggcacgaggagatcgtatgggcggtggaggcgacg
gatgggcacctgtttagcgcctccgcggacaagtcgatccgcgcttgggacaccaagacg
cgccggtgcgtgcacgtgctggaggagcacaccaggccagtgctctcgctggtggtgagt
caactgcacggcaagctcttctctggatcctacgactgcagcatatgcgtgtgggacctc
gtcacattcaggcgcataaagtccctgcacggacacacggacgccgtacgttcgttggcg
gtggctggggacacgctcttcagtgcctcgtacgattcaaccctacgggcgtacgacatc
aacacgctgaagcccctcaaggtgctggagggtcacaccggcccggtgcgtacactcacc
gtccttggcgcgcacctgttctcgggttcgtacgattacaccgtgagggtgtggcacacg
gagactttggagcccgtgcacgtgctcgagggtcacaccgatgcggtcagggcactcgcg
gcatcgccagtgcctgagctcaagtacatcttctcaggatcggacgacaactccgtccgg
gtatgggacgcgaacacgttcaagtgcgtgagcgttttccagggccacgaggataacgtg
agagtactgacagcggacagccgctacctttacagcggctcatgggacaagactatccgt
gtttgggacactcagtcgcttgagtgtgttcgcgtgctggagggccacatggaggctgtg
ttggcgctcacggtgatgcgaggccacctgattagtgggtcctacgacaccactgtcagg
ttttggaacacggaaacgttccagtgtgtggggaagttcgaaggtcacgacgacgcggtt
cgagtgctcacctccacgggggaggatgccgagagcgtgtacagcgggtcctacgacggg
agcatcgggttctggtcgctgcccgcaccgacctccaacacgcgagcacctgcaacacgc
tga
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