KEGG   Micromonas commoda: MICPUN_85209
Entry
MICPUN_85209      CDS       T02695                                 
Name
(RefSeq) predicted protein
  KO
K12608  CCR4-NOT complex subunit CAF16
Organism
mis  Micromonas commoda
Pathway
mis03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:mis00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    MICPUN_85209
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mis03019]
    MICPUN_85209
Messenger RNA biogenesis [BR:mis03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Ccr4-NOT complex
     MICPUN_85209
SSDB
Motif
Pfam: ABC_tran AAA_21 AAA_29 AAA_25 nSTAND3 AAA_23 AAA_28 AAA_22 SRP54 TsaE AAA_16 ORC-CDC6-like
Other DBs
NCBI-GeneID: 8246602
NCBI-ProteinID: XP_002504411
JGI: MicpuN3_85209
UniProt: C1ED01
LinkDB
Position
9:join(1137797..1138236,1138299..1138512,1138581..1139030)
AA seq 367 aa
METAGPFAALAKRKAEEASGGAAPAADTQAVPAPTDAATTAAVRETSSDTTQVWGVNVNN
LDWSYPNIDGTPIDGQEPLIKGMDLKLAPGSCCLLLGANGAGKTTLLKILGGKHMVPKDK
VLIHGREAFYDTGLTTSGQLSYIGGNWQRDVAFAGYGVTLAGDFPARQMLDSIPNVDPER
KARIIDVLDIDPEWRMHQVSDGQRRRVQLAYGLMIPYSVLLLDEITVDLDVLGRADLMSF
LRRECEERNVTIVYATHIFDGLEQFATHVAFVAGGRLRFCEPLDAIDGLKSREPGSLLDT
VQVWLRQEAEAKRKERESAGFVKKKVFEYVRNSGWGEGRMASTVSFGPELGQKHVGMKGS
SNAVMRN
NT seq 1104 nt   +upstreamnt  +downstreamnt
atggagaccgccggtccgttcgcggcactcgccaagcgaaaggcggaggaggcatcggga
ggcgcggctcccgccgctgatacccaggccgttcccgccccgacagacgcggcgacgacc
gcggcggttcgcgagacatcctccgacaccacgcaggtgtggggcgtcaacgtcaacaac
ctggactggtcctacccgaacatcgacggcacccccatcgacggtcaggagcccctcatc
aagggcatggacctcaagctcgcgcccggatcgtgctgcctcctgctcggcgcgaacggc
gcggggaagacgacgctgctcaagatactcgggggtaagcacatggtccccaaggacaag
gtgctcatccacggccgcgaggctttctacgacaccggactcaccacctccggacagctg
tcgtacatcggcggcaactggcaacgcgacgtcgccttcgccggctacggcgtcaccctc
gccggggacttccccgcgaggcagatgctcgactccatcccgaacgtggaccccgaacgc
aaggcgcggatcatcgacgtcctggacatcgacccggagtggcgcatgcaccaggtgtcc
gacggccagcgcagacgcgtgcagctcgcgtacgggctcatgattccctactcggtttta
ctcttggacgagatcaccgtggacctcgacgtgctgggcagggcggacttgatgtcgttt
ttaaggcgggagtgcgaggaacggaacgtgacgatcgtgtacgccacgcacatcttcgac
gggctggagcagttcgcgacgcacgtcgcgttcgtcgcgggggggcggctgcgtttttgc
gaacccctcgacgccatcgacgggctcaagtcgcgcgagcccggaagtcttctggacacc
gtccaggtgtggctgcgtcaggaggccgaggcgaagcgaaaagaacgcgaatccgcgggg
ttcgtgaagaagaaggtgttcgagtacgtccgcaacagcgggtggggcgagggacgcatg
gcgagcacggtgtcgtttggaccggagctcggccagaagcacgtcggaatgaaagggagc
tccaacgccgtcatgcgcaactaa

DBGET integrated database retrieval system