Micromonas commoda: MICPUN_97033
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Entry
MICPUN_97033 CDS
T02695
Symbol
EF-TU
Name
(RefSeq) elongation factor tu gtp-binding domain protein 2
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
mis
Micromonas commoda
Pathway
mis03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mis00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
MICPUN_97033 (EF-TU)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mis03041
]
MICPUN_97033 (EF-TU)
Spliceosome [BR:
mis03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
MICPUN_97033 (EF-TU)
Complex C
U5 SnRNP specific factors
MICPUN_97033 (EF-TU)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
EFG_III
MMR_HSR1
EF-G_D2
WHD_NrtR
Septin
EFL1
Motif
Other DBs
NCBI-GeneID:
8241211
NCBI-ProteinID:
XP_002499530
JGI:
MicpuN3_97033
UniProt:
C1E0B7
LinkDB
All DBs
Position
2:join(625508..625613,625769..628623)
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AA seq
986 aa
AA seq
DB search
MDSHYDEFGNYIGPELSDDSDSDGGADANDQQVRSRDVDNGTAGMDVDGDDAEENFETAI
VLAEDKKYYPTAEEVYGPGTETLIMDEDAQPLEEPIIAPVKKKQIEADRGKNALELKVSE
EYLRGLMGNANLVRNVAVAGHLHHGKTTVFDMLVEQTHHVDDAIVHADDRALRYTDTRLD
EQDREVSIKAVPMSLVMPNGAGKHLLFNMMDTPGHVNFSDEVTASYRLSDGVMLVVDAVE
GVMCGTERLIKHAAKERLPICVFVNKVDRLILELKLPPADAYHKIRHTLEEINAIIEATY
GGDENAPFADPVKGSVCFGSAKYGWSFTLNSFARLYADIRGVDMDTQAFARRLWGDMYFN
EETRTFRRKPPPGGGDRSFVQFILEPLYKIYSQAVGEHQASFARVLAELGVTLKPKEYRM
NTKPLIKLACTKIFGDASGLVDMLCAHVPTARGGAPAKVENAYAGPLAGADGQSCVNTMR
ACDPNGPLQVMVAKLYPKDDCSSFDALARVMSGTLKKGQNVRVLGEAYSPDDEEDCAVKQ
VTNLWVYQARYRIPVEEVAAGAWVLVEGIDGSISKTATLVAEYGEEDAYVFRPLAFDNQS
VVKIATEPLNPSDLPKMVEGLRKINKSYPLAVTKVEESGEHTIMGTGEIFLDSIMKDLRE
LYSEVEVKVADPVVTFCETVVETSSLKCFAETPNKKNKITMIAEPLDKGLAADIENGTVS
LKWPKKKLGDFFQNKYDWDILAARSVWAFGPDEKGANALLDDTLPGEIDKSLLNAVKESI
VQGFQWGTREGPLCDEPIRNVKFKILDAIVADQPLHRGGGQVIPTARRVAYSSFLMASPR
LMEPVFACEIQTPADCMSAIYTVLSKRRGHVIADNPKPGTPVYTVKALIPAIESFGFETD
LRYHTQGQAFGQSYFDHWAVVPGDPLDRGIVLRPLEPSPVQALAREFMVKTRRRKGMSED
VSVQKFFDDTLLAELAKADAGIEGIM
NT seq
2961 nt
NT seq
+upstream
nt +downstream
nt
atggactcgcactacgacgagttcggcaactacatcggacccgagctgagcgacgatagc
gacagcgacggtggggcggatgccaacgaccagcaggtgagatcccgggatgtcgacaac
ggcaccgcgggcatggacgtcgacggcgacgacgccgaggagaacttcgaaaccgcgatc
gtcctcgccgaggacaagaagtactacccaaccgcggaggaggtgtacggccccgggact
gagacgctgatcatggacgaggacgcgcagccgctcgaggagcccatcatcgcgccggtg
aaaaagaagcagatcgaggcggatcggggtaagaacgcgctcgagttgaaggtgagcgag
gagtacctgcggggcctcatgggcaacgccaacctcgtgcggaacgtagccgtcgccggg
cacctgcaccacggcaagacgacggtgttcgacatgctggtggagcagacgcaccacgtg
gacgacgcgatcgtgcacgcggacgatagggcgctgcgatacacggacaccaggttggac
gagcaggaccgggaggttagcatcaaggcggtgcccatgtcgctggtgatgccaaacggc
gcgggcaagcacctgctcttcaacatgatggacaccccgggccacgtcaacttcagcgac
gaggtcaccgcgagctaccgtttgagcgacggcgttatgctcgtggtggacgcggtggag
ggcgtgatgtgcggcacggagcggctcatcaagcacgccgcgaaggagcgtctgccaatc
tgcgtatttgtcaacaaggtggacaggctcatcctcgagctcaagcttccccccgcggac
gcgtaccacaagatcaggcacacgctcgaggagatcaatgccatcatcgaggccacctac
gggggcgacgagaacgcgccgttcgcggatccagtcaaggggagcgtgtgctttggatcc
gcaaagtacggctggtccttcaccctcaactcattcgcgaggctctacgcggatattcgc
ggcgtagacatggatacccaggcgttcgcgcgcaggctctggggcgacatgtacttcaac
gaggagacgcgcacgttcagacgcaagcccccaccgggcggcggcgaccgctccttcgtg
cagtttatcctcgagccgctgtataagatttactcgcaagccgtgggcgagcaccaggcg
tccttcgcccgcgtcctcgccgagctcggcgtgacgctcaaacccaaggagtacaggatg
aacaccaagcccctcatcaaactcgcgtgcaccaagatcttcggcgacgcgtccggtctg
gtcgacatgctctgcgcgcacgtgcccaccgcgaggggcggagcgccagccaaggttgaa
aacgcgtacgcgggccccctcgccggcgccgacggccaaagctgcgtgaacaccatgcgc
gcgtgcgacccgaacggcccgttgcaggtgatggtcgcgaagctctacccgaaggacgat
tgctcatccttcgacgcgctcgcgagggtcatgagcggcacgctgaagaagggtcagaac
gtgcgggtgttgggcgaggcgtactcgccggatgacgaggaggactgcgcggtgaagcag
gtgacgaacctgtgggtgtaccaggcgaggtaccgcatccccgtggaggaggtcgccgcg
ggcgcctgggttctcgtcgagggcatcgacgggagcatcagcaagacggcgacgctcgtg
gcggagtacggggaggaggatgcgtacgtgttcaggcctctcgcgtttgataaccagtcg
gtggtgaagatcgcgacggagccgctgaaccccagcgacctgccgaagatggtcgagggt
ctgcgtaagatcaacaagtcctacccgctcgcggtgacgaaggttgaggagagcggcgag
cacaccatcatgggcacgggtgagattttcctggactccatcatgaaggaccttcgcgag
ctgtactcggaggttgaggtcaaggttgccgacccggtcgtcaccttctgcgagaccgtg
gtcgagacgtccagcctgaagtgcttcgcagagaccccgaacaagaaaaacaagatcacc
atgatcgccgagccgctggataaaggattggcggcggacatcgagaacgggacggtgtca
ctcaagtggccaaaaaagaagctcggggatttcttccagaacaagtacgattgggatatc
ctcgccgcgcggagcgtgtgggcgttcggcccggacgagaagggtgccaacgcgctgctc
gatgacaccctgcccggtgagatcgacaaatccctgctcaacgcggtcaaggagagcatc
gtgcagggtttccagtggggcacgagggaaggaccgttgtgcgacgagcccatccgcaac
gttaagtttaagatcctggacgcgatcgtcgcggatcagccgctgcacaggggcggcggg
caggtgatccccactgcgcgcagggtggcgtattcatcgttcctgatggcgtcgccgagg
ctgatggagcccgtgttcgcttgcgagattcagacccccgcggattgcatgagtgcaatt
tacacggtgctctccaagcgccgcgggcacgtcatcgccgacaaccccaagcccggcact
ccggtgtacacggtcaaggcgctcatccccgcgatcgaatcgttcggcttcgaaacagat
cttcgctatcacacgcagggccaggcgttcgggcagagctacttcgatcattgggcggtt
gtgcccggcgacccgctggaccgcggcatcgtcctgaggccgctggagccgagcccggtg
caggcgctcgcgagggagttcatggtgaagacgaggcgacggaaggggatgagcgaggac
gtgagcgtgcagaagttcttcgacgacacgctcctcgcggagctggccaaggcggacgcg
ggcatcgaggggatcatgtga
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