Methylomagnum ishizawai: MishRS11D_13830
Help
Entry
MishRS11D_13830 CDS
T07434
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
misz
Methylomagnum ishizawai
Pathway
misz03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
misz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MishRS11D_13830 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
misz03400
]
MishRS11D_13830 (nth)
Enzymes [BR:
misz01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
MishRS11D_13830 (nth)
DNA repair and recombination proteins [BR:
misz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
MishRS11D_13830 (nth)
Prokaryotic type
MishRS11D_13830 (nth)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_5
Motif
Other DBs
NCBI-ProteinID:
BBL74285
LinkDB
All DBs
Position
complement(1508969..1509613)
Genome browser
AA seq
214 aa
AA seq
DB search
MNAEQRLEIFQRLAAAIPEPTTELRYSTPFELLIAVVLSAQATDKGVNKATAQLFPVANT
PAAILALGEEGLREYIKTIGLYNSKGRNIIALCRLLLEQHGGAVPRTREALEALPGVGRK
TANVILNTAFGAHTIAVDTHIFRVANRTGLAPGKNVLLVERGLEQTTPTAFLKDAHHLLI
LHGRYTCVARKPKCPRCPIADLCEYPDKTPAAPD
NT seq
645 nt
NT seq
+upstream
nt +downstream
nt
atgaacgccgaacaacgcctagaaatcttccagcgcctcgccgccgccatccccgaaccc
accacggaactgcgatattccacgccgttcgagctattgatcgcggtggtgctgtcggcc
caggccaccgacaaaggcgtcaacaaggccacggcccagttgttcccggtcgccaatacg
cccgcggccatcctggcattgggggaagaaggtctgcgcgaatacatcaagaccatcggc
ctttacaacagcaagggcaggaatatcatcgccctctgccgcctcctgctggaacagcac
ggcggcgcggtgccgcgcacccgcgaagcgctggaagccctccccggcgtgggacgcaag
accgccaatgtgatcctcaacaccgccttcggtgcccataccatcgcggtcgatacccat
atcttccgggtcgccaaccgcaccgggctggcccccggcaagaacgtcctgctagtggag
cgcggtttggaacaaaccacgcccacggccttcctcaaggacgcccaccatcttttgatc
ctgcacgggcgctatacctgcgtggcccgcaagccgaaatgcccgcgatgccccatcgcc
gacctgtgcgaataccccgataaaacccccgccgccccggattag
DBGET
integrated database retrieval system
