Mycobacterium intracellulare MOTT-02: OCO_36870 Help Entry OCO_36870         CDS       T01754                                  Name (GenBank) NAD-dependent DNA ligase LigA   KO K01972   DNA ligase (NAD+) [EC:6.5.1.2] Organism mit  Mycobacterium intracellulare MOTT-02 Pathway mit03030   DNA replication mit03410   Base excision repair mit03420   Nucleotide excision repair mit03430   Mismatch repair Brite KEGG Orthology (KO) [BR:mit00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     OCO_36870    03410 Base excision repair     OCO_36870    03420 Nucleotide excision repair     OCO_36870    03430 Mismatch repair     OCO_36870  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:mit03032]     OCO_36870    03400 DNA repair and recombination proteins [BR:mit03400]     OCO_36870 Enzymes [BR:mit01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.2  DNA ligase (NAD+)      OCO_36870 DNA replication proteins [BR:mit03032]  Prokaryotic type   DNA Replication Elongation Factors    Elongation factors (bacterial)     Other elongation factors      OCO_36870 DNA repair and recombination proteins [BR:mit03400]  Prokaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     DNA ligase      OCO_36870    NER (nucleotide excision repair)     GGR (global genome repair) factors      OCO_36870    MMR (mismatch excision repair)     DNA ligase      OCO_36870   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      RecET pathway       OCO_36870 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_aden DNA_ligase_OB HHH_2 BRCT DNA_ligase_ZBD HHH_5 Nlig-Ia PTCB-BRCT HHH BRCT_2 Auto_anti-p27 Motif Other DBs NCBI-ProteinID:  AFC50050 LinkDB All DBs Position complement(3921545..3923626) Genome browser AA seq 693 aa AA seqDB search MSSAEADSVAPEVRRQWQDLAEAVREHQFRYYIKDAPIISDAEFDTMFNELLALEERHPE LRVADSPTQLVGGAGFATDFAEAQHLERMLSLDDVFDRDELVAWSNRVENEVGKEPHYLC ELKIDGVALSLVYRDGRLERAATRGDGRVGEDVTLNARTIDDVPERLSAGKDFPTPSLLE VRGEVFFLLADFEALNASLVEDGKAPFANPRNSAAGSLRQKNPAVTARRKLRMICHGIGR TEGFAPKTQHEAYAALKAWGLPVAEQTARVRGLAAVEERIGYWGEHRYDLEHEIDGVVVK VDDVALQRRLGTTSRAPRWAVAYKYPPQEAQTKLLDIRVNVGRTGRVTPFAFMTPVKVAG STVGLATLHNAAEVKRKGVLIGDTVMIRKAGDVIPEVLGPVVDLRDGSEREFVMPTTCPE CDTPLAPAKEGDADIRCPNARSCPAQLRERVFHVAGRGAFDIEGLGYEAAIALLKAEVIA DEGDLFTLTEDDLLRTELFRTKAGTLSANGRRLLDNLDKAKKVALWRVLVALSIRHVGPT AARALATEFGDLDAIMSASTERLAAVEGVGPTIAAALTEWFTVDWHRAIVDKWRAAGVRM ADERDTSVPRTLEGLTVVVTGSLAGFSRDDAKEAILARGGKAAGSVSKKTDYVVAGDSPG SKYDKAVELGVPVLDEDGFRRLLADGPQKTPAE NT seq 2082 nt NT seq  +upstreamnt  +downstreamnt gtgagctcagcagaagctgattcggtagcgcccgaggtccggcggcagtggcaggacctg gccgaagcggtccgggaacaccagttccgctactacatcaaggacgcgccgatcatctcg gacgccgaattcgacacgatgttcaacgagctcctcgcgctggaggagcgccacccggag ctgcgggtcgccgattcgccgacccagctggtcggcggcgcgggcttcgccaccgacttc gccgaggcgcagcacctggaacgcatgctgagcctcgacgacgtcttcgaccgcgacgag ctggtggcctggagcaaccgcgtcgagaacgaggtcggcaaggaaccgcattacctgtgc gaactcaagatcgacggggtcgcgctctcactggtgtaccgcgacggccggctggaacgc gccgcgacccgcggcgacggccgcgtcggtgaggacgtgacgctcaacgcgcgcaccatc gacgacgtgcccgagcggctgtccgccggcaaggacttcccgacgccgtccctgctggag gtgcgcggcgaggtgttcttcctgctcgccgatttcgaggcgctcaacgccagcctggtc gaggacggcaaggcccccttcgccaacccgcgcaacagcgccgccgggtcgctgcgccag aagaacccggccgtcaccgcccggcgcaagctgcggatgatctgccacggcatcggccgc accgaagggttcgccccgaagacccagcacgaggcctacgccgcgctgaaggcctggggg ctgccggtggccgaacagacggcacgcgtgcgcggcctcgccgcggtcgaggagcggatc ggctactggggagagcatcgctacgacctcgagcacgagatcgacggcgtggtggtcaaa gtcgacgacgtcgcgttgcagcgcaggctcggcaccacgtcgcgcgcgccgcgctgggcc gtcgcctacaagtacccgccccaggaggcgcagaccaagctgctcgacatccgcgtcaac gtcgggcgcaccgggcgcgtaacgccctttgccttcatgacgccggtgaaggtggccggg tccaccgtcggcctggccaccctgcacaacgccgccgaggtcaagcgcaagggcgtgctg atcggcgacaccgtgatgatccgtaaagccggcgacgtcatcccggaggtgctgggcccg gtcgtcgacctgcgcgacggctccgaacgcgaattcgtcatgcccacaacgtgtcccgag tgcgataccccgctggcaccggccaaggagggcgacgccgacatccgctgccccaatgcc cggtcctgtccggcgcaactgcgggagcgggtgttccacgtcgccggtcgcggggcgttc gacatcgaggggctcggctacgaggccgccatcgcgctgctcaaggccgaagtgatcgcc gacgagggcgacctgttcacgctgaccgaggacgacctgttgcgcaccgagctcttccgg accaaggcgggcaccttgtccgccaacggcagacggctgctcgacaacctggacaaggcc aaaaaggttgcgctgtggcgggttttggtggcgttgtccatccgccacgtcgggccgacg gcggcgcgcgccctggcgaccgagttcggcgacctggacgccatcatgtcggcctcgacc gagcggctcgcggcggtcgagggtgtgggcccgacgatcgccgccgcgctcaccgaatgg ttcaccgtcgactggcaccgcgcgatcgtcgacaagtggcgcgccgccggcgtgcggatg gccgacgagcgcgataccagcgtgccgcgcaccctggagggcctgacggtggtggtcacc gggtccctcgccggcttttcgcgcgacgacgccaaggaggcgatcctggcgcgcgggggc aaggccgccgggtcggtgtcgaagaagaccgactacgtcgtggccggggattcgccgggg tcgaagtacgacaaggccgtcgagctgggggtgcccgtcctcgacgaggacggcttccgg cggctgctggccgacggtccgcaaaaaacaccggcggaataa

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