Microvirga sp. 17 mud 1-3: C4E04_02105
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Entry
C4E04_02105 CDS
T05470
Symbol
sucA
Name
(GenBank) 2-oxoglutarate dehydrogenase E1 component
KO
K00164
2-oxoglutarate dehydrogenase E1 component [EC:
1.2.4.2
]
Organism
miv
Microvirga sp. 17 mud 1-3
Pathway
miv00020
Citrate cycle (TCA cycle)
miv00785
Lipoic acid metabolism
miv01100
Metabolic pathways
miv01110
Biosynthesis of secondary metabolites
miv01120
Microbial metabolism in diverse environments
miv01200
Carbon metabolism
miv01210
2-Oxocarboxylic acid metabolism
Module
miv_M00009
Citrate cycle (TCA cycle, Krebs cycle)
miv_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
miv00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
C4E04_02105 (sucA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
C4E04_02105 (sucA)
Enzymes [BR:
miv01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
C4E04_02105 (sucA)
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Gene cluster
GFIT
Motif
Pfam:
E1_dh
OxoGdeHyase_C
Transket_pyr
2-oxogl_dehyd_N
PFOR_II
Motif
Other DBs
NCBI-ProteinID:
AWM85656
UniProt:
A0A2Z3I4P3
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All DBs
Position
454417..457377
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AA seq
986 aa
AA seq
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MSRQDANEAFLNTAFLYGANAPYIEELYARYQNDPSSVDAEWQAFFGALKDDKQSVVENA
RGASWKKPNWPVAANGELISALDGNWAQVEKAVGDKIKAKATEKGSEISQEQVLQATRDS
VRAIMLIRAYRVRGHLHAKLDPLGINPRPNDQELHPSHYGFTDADWDRRIFLDNVLGLEF
ATIREIVTILERTYCQTLGVEFMHISDPAEKAWIQERIEGPDKEITFTREGKRAILNKLV
EAEGFEKFLDLKYTGTKRFGLDGGESLIPALEQIIKRGGNLGVQEIVLGMAHRGRLNVLT
QVMGKPHRALFHEFKGGSFAPDDVEGSGDVKYHLGASSDRTFDGNNVHLSLTANPSHLEI
VDPVVLGKVRAKQDQHGCSPDNRTAVMPLLIHGDAAFAGQGVVAECLGLSGLRGHRTGGS
IHFIINNQIGFTTDPRFSRSSPYPSDVAKMVEAPIFHVNGDDPEAVVFAAKVATEYRQKF
QKPVVVDMFCYRRFGHNEGDEPSFTQPLMYRKIRSHPTILELYSKKLLAEGAVTEADIDE
MRSAWRSKLEAEFDIAQNYKPNKADWLDGRWAGLKAVREDQDDPRRGQTGVPVETLKNIA
KALTTVPEGFHVHRTIQRFLDNRKKMIETGEGIDWAMGEALAFGSLLLEGHRVRLSGQDV
ERGTFSQRHSVLVDQENEERYTPLNHIREEQARYEVINSMLSEEAVLGFEYGYTLSEPNA
LTLWEAQFGDFANGAQVVFDQFISSGERKWLRMSGLVCLLPHGYEGQGPEHSSARLERWL
QMCAEDNMQVAYCSTPSNYFHILRRQLKREFRKPLILMTPKSLLRHKRAVSPLSAISEGT
YFHRVLADDAQRLSDGIKLVKDDKIRRVVICTGKVYYDLYEEREKRGIDDVYLMRVEQLY
PFPAKSLAAELARFKKADVVWCQEEPKNMGSWTFVEPYLEWVLKTAGSKVDRPRYVGRAA
SAATATGLMSKHLAQLQAFLDEAFAA
NT seq
2961 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgccaggacgccaacgaagctttcctcaacaccgctttcctctacggggcgaat
gcgccctatatcgaggagctctatgcccgctaccagaacgacccgtcctcggtcgatgcg
gagtggcaggccttcttcggggcgctcaaggacgacaagcaatccgtcgtcgagaacgcc
cgcggcgcctcctggaagaagccgaactggcccgttgcggccaacggggagctgatctcg
gccctcgacggcaactgggcccaggtcgagaaggcggtcggcgacaagatcaaggcgaag
gcgaccgagaagggttccgagatcagccaggagcaggtgctccaggcgacccgggattcg
gtgcgggccatcatgctgatccgcgcctaccgggtgcgcggccacctccatgccaagctc
gacccgctcggcatcaatccgcgcccgaacgaccaggaactgcatccctcccattacggc
ttcacggatgccgattgggaccgccggatcttcctcgacaacgtgctcgggctcgaattc
gcgaccatccgcgagatcgtcacgatcctggagcgcacctactgccagaccctcggcgtg
gaattcatgcacatctccgatccggccgagaaggcctggatccaggagcgcatcgaaggc
cccgacaaggagatcaccttcacgcgcgagggcaagcgggcgatcctcaacaagctcgtc
gaggcggaaggcttcgagaagttcctcgacctgaaatacaccggcaccaagcgcttcggt
ctcgacggcggcgagtcgctgatcccggcccttgagcagatcatcaagcgcggcggcaat
ctcggcgtgcaggagatcgttctcggcatggcccatcgtggccgcctgaacgtgctcacc
caggtcatgggcaagccgcaccgggcgctcttccatgagttcaagggcggctccttcgcg
cccgacgacgtggagggctcgggcgacgtgaagtaccatctcggcgcttcctcggaccgc
accttcgacggcaacaacgtccacctgtcgctgaccgcgaacccctcgcacctggagatc
gtcgatccggtggtgctcggcaaggtccgcgccaagcaggaccagcacggctgctcgccg
gacaaccgcacggccgtaatgccgctcctcatccacggcgacgcggccttcgcgggccag
ggcgtggtggcggagtgcctgggcctgtcgggcctgcgcggccaccgcaccggcggctcg
atccatttcatcatcaacaaccagatcggcttcacgaccgatccgcgcttctcgcgctcg
tctccctatccgtcggatgtggcgaagatggtggaggcgccgatcttccacgtgaacggg
gacgacccggaggccgtggtcttcgccgcgaaggtcgcgaccgagtaccgccagaagttc
cagaagccggtcgtggtcgacatgttctgctaccgtcgcttcggtcacaacgagggcgac
gagccgtccttcacccagccgctgatgtaccgcaagatccggtcgcacccgacgatcctg
gagctctattccaagaagctcctggctgaaggcgccgtgacggaggcggatatcgacgag
atgcggagcgcctggcgctcgaagctcgaggccgagttcgacatcgcccagaactacaag
cccaacaaggccgactggctcgacgggcgctgggccggcctcaaggccgtccgcgaggac
caggacgatccgcgccgcggccagacgggcgttccggtcgagaccctgaagaacatcgcc
aaggcgctgaccacggttccggagggcttccacgtccaccgcacgatccagcgcttcctc
gacaaccgcaagaagatgatcgagaccggcgagggcatcgactgggccatgggcgaggcg
ctcgccttcggctcgctcctgctcgaaggccatcgcgtgcgcctgtccggccaggacgtg
gagcgcggcaccttctcgcagcgtcactcggtgctggtcgaccaggagaacgaggagcgc
tacacgcccctcaaccacatccgcgaggaacaggcccgctacgaggtcatcaactcgatg
ctctcggaggaggcggtcctcggcttcgagtacggctataccctctcggagccgaacgcc
ctgaccctgtgggaggcccagttcggcgacttcgccaacggcgcccaggtggtgttcgac
cagttcatctcgtcgggcgagcgcaagtggctgcgcatgtcgggcctcgtctgcctgctg
ccgcacggctatgagggccagggccccgagcactcctcggcccgcctcgagcgctggctg
cagatgtgcgccgaggacaacatgcaggtggcgtattgctcgaccccgtcgaactacttc
cacatcctgcggcgccagctgaagcgggagttccgcaagcccctgatcctgatgacgccg
aagtcgctgctgcgccacaagcgcgccgtgtcgcccttgagcgcgatctcggagggcacg
tacttccatcgtgtcctggcggatgatgcgcagcggctctccgacggcatcaagctcgtc
aaggacgacaagatccgtcgcgtggtgatctgcaccggcaaggtctattacgacctctac
gaggagcgggagaagcgcgggatcgacgacgtctacctgatgcgcgtcgagcagctctat
ccgttcccggccaagtcgctcgcggcggagctcgcccggttcaagaaggccgacgtggtg
tggtgccaggaggagcccaagaacatgggatcctggaccttcgtcgagccctatctggaa
tgggtgctcaagaccgccggctcgaaggtggaccgtccccgctatgtgggccgcgcagcc
tccgcggccacggccacgggtctgatgtccaagcacctggcgcagctgcaggctttcctc
gacgaggctttcgcggcttaa
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