Microvirga sp. 17 mud 1-3: C4E04_17065
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Entry
C4E04_17065 CDS
T05470
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
miv
Microvirga sp. 17 mud 1-3
Pathway
miv01501
beta-Lactam resistance
miv01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
miv00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
C4E04_17065
01503 Cationic antimicrobial peptide (CAMP) resistance
C4E04_17065
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
miv03036
]
C4E04_17065
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
miv02000
]
C4E04_17065
01504 Antimicrobial resistance genes [BR:
miv01504
]
C4E04_17065
Chromosome and associated proteins [BR:
miv03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
C4E04_17065
Transporters [BR:
miv02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
C4E04_17065
Antimicrobial resistance genes [BR:
miv01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
C4E04_17065
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl_2
Biotin_lipoyl
HlyD_2
CusB_dom_1
PTS_EIIA_1
VIT
Motif
Other DBs
NCBI-ProteinID:
AWM88283
UniProt:
A0A2Z3IBU8
LinkDB
All DBs
Position
3629780..3631051
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AA seq
423 aa
AA seq
DB search
MRVSRQLAVIAVLGAAGYGGWYAYQGGHLAKAPVIGGYFAKAGEPAGPAGRGRRGPSGPP
TVDVGTVQTGRIVETRESVGTVRAYESITVTAKIAGVISEIGFEEGQKVKAGDMLVQLDA
AERKAEIEQAVAEANRAVALRNEIAIKLERAQALNRTGAGTTAQVEDLTAQSKSLEGSIA
SAQAQRKAAEARLEDLTIRAPFAGRVGTRAVSLGAYISPGTRITSLDDLSRIRLDFAVPE
NLLGRLKPGQTVNATSAAYRDRVFKGTVSTIDTRIDQTTRTVRLTAEFDNPDEALKPGMF
LAVALEVTVKDDAVVVPEEAIVSEGLRQIVYPVKDGKVERRVIKLGQRQNGKAEILEGLQ
AGETIVVLGVQRVRPGLEVIARPLGSAPQQPADQAPAANREQPSRSSLNLPTAISSASAA
ERN
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgtgtcacgtcagctcgccgtcatcgccgtgctgggggcagcgggttatggcggc
tggtacgcctatcagggcggccacctcgcgaaggcgccggtcatcggcggctatttcgcg
aaagccggagagccggcggggccggccgggcgtggcaggcgcggtccctcgggcccgccg
acggtcgatgtgggcacggtgcaaaccggccggatcgtcgagactcgcgagtcggtcggc
acggtgcgtgcctatgaatccatcacggtcacggccaagatcgccggcgtgatcagcgag
atcggcttcgaggaaggccagaaggtcaaggccggcgacatgctggtccagctggatgcg
gccgagcgcaaggccgagatcgagcaggccgtcgccgaggcaaaccgggccgtggcgctc
cgcaacgagatcgcgatcaagctcgagcgtgctcaggcgctcaaccgcaccggcgccggc
accacggcccaggtggaggacctgacggcccagtccaaatccctggaaggctccatcgcc
tccgcccaggcccagcggaaggctgcggaagcccggctcgaggatctgacgatccgcgcc
cccttcgcgggccgcgtcggcacccgcgccgtgtcgctcggggcctatatctcgcccggc
acccgcatcacgtccctggacgacctgtcccgcatccggctggatttcgcggttccggag
aacctcctcgggcgcctcaagcccggccagaccgtgaacgccacctcggccgcttatagg
gaccgggtcttcaagggcaccgtctcgaccatcgacacgaggatcgaccagaccacccgc
acggtgcggctgacggccgagttcgacaatcccgacgaggcgctcaagcccggcatgttc
ctggccgtcgcgctggaagtcaccgtcaaggacgacgccgtcgtcgtgcccgaggaagcc
atcgtcagcgagggcctgcgccagatcgtctatccggtgaaggacggcaaggtggagcgt
cgggtcatcaagctcggccagcgccagaacggcaaggccgaaatcctggagggcctgcag
gccggcgagaccatcgtggtcctcggcgtccagcgcgtgcgcccgggcctcgaggtgatc
gcccgccctctcggttcggcgccccagcagccggccgaccaggcgccggcggcgaaccgt
gaacagccgtcgcgcagctcgctcaacctgccgaccgccatcagcagcgcgtcagccgcc
gagcggaactga
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