Malacoplasma iowae: EER00_01720
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Entry
EER00_01720 CDS
T06673
Symbol
ligA
Name
(GenBank) NAD-dependent DNA ligase LigA
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
miw
Malacoplasma iowae
Pathway
miw03030
DNA replication
miw03410
Base excision repair
miw03420
Nucleotide excision repair
miw03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
miw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
EER00_01720 (ligA)
03410 Base excision repair
EER00_01720 (ligA)
03420 Nucleotide excision repair
EER00_01720 (ligA)
03430 Mismatch repair
EER00_01720 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
miw03032
]
EER00_01720 (ligA)
03400 DNA repair and recombination proteins [BR:
miw03400
]
EER00_01720 (ligA)
Enzymes [BR:
miw01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
EER00_01720 (ligA)
DNA replication proteins [BR:
miw03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
EER00_01720 (ligA)
DNA repair and recombination proteins [BR:
miw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
EER00_01720 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
EER00_01720 (ligA)
MMR (mismatch excision repair)
DNA ligase
EER00_01720 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
EER00_01720 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
OB_DNA_ligase
HHH_2
BRCT
DNA_ligase_ZBD
HHH_5
HHH
PTCB-BRCT
RNA_ligase
Nlig-Ia
5_3_exonuc
Motif
Other DBs
NCBI-ProteinID:
QHG89616
UniProt:
A0A6P1LB14
LinkDB
All DBs
Position
complement(889622..891628)
Genome browser
AA seq
668 aa
AA seq
DB search
MNKENIKKEIEILKQNLKQWEYEYYGLENPTVSDYEYDQALKKLISLEIAYPEFKTDDSP
SNRVGGYISEKFSKVKHKYPMLSLSNAFDKNDLIKFDADIKKELNVKEVEYVVEPKIDGL
SISLIYKNGKLLQAITRGDGVIGEDVTANVKTIKTIPLTIDYQDEIEIRGEIFLTKADFL
KINNDKNLIKKFANARNAASGSLRNLDTSITASRNLTGYFYYVPNSRQLNINKQYDVLKW
LSDHKILTSKDIIKAKNIDEVIQRVEELTKLRDSFKYDIDGIVIKVNNIDWYEEIGYTSK
FPKWATAYKFPANIKTSTLNSIDVTVGRTGRINFIANITPIELDGSIISKATLHNAEYII
EKDIRINDVVEIYKAGDIIPKIIKPIKEERNKNSVEWKPPLHCPCCNSVLVKFENEVDQY
CINTNCEDKIIQQISHFCSRDAMNVDGLSEAIIEKFYKNNLINNVADLYEIKNKKEAILN
LDILIKEKAFNNIVNAIEKTKENSLEKLIFGLGIRHVGFNVAKLVAKRFKSINGIINASV
DDILSIGEVGEKIAISITNWFNDIDNIKTIKRLKEYGVNFNYINEYADFVVSPENEKYKN
KSFVITGSFEKNRNEIKNILESVYHAKVTSSVTKNTDYLIIGNSPTQNKIEKAKSLNIPI
IEKPFWNN
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atgaataaagaaaatatcaaaaaagaaatcgaaatcttaaagcaaaatttaaaacaatga
gagtatgaatattatggattagagaatccaacagtaagcgattatgaatatgatcaagct
ttaaaaaaattaatttcacttgaaatagcatacccagaatttaaaactgatgattcacca
tcaaatcgtgttggtggttatatatcagaaaagtttagcaaagttaaacacaaatatcct
atgttatcattatcaaatgcttttgataaaaatgatcttattaaatttgatgctgatata
aaaaaagaacttaatgttaaagaagttgaatatgttgttgaaccaaaaattgatggttta
agtatttctttaatttataaaaatggaaaacttttacaagcgataacaagaggtgatggt
gttattggtgaagatgttacagcaaatgttaaaacaattaaaacaataccattaacaata
gactatcaagatgaaattgaaattaggggtgaaatatttttaactaaagcagatttttta
aaaataaataatgataaaaatttgattaaaaaatttgctaatgctagaaatgctgcaagt
ggttctttaagaaatctagatacatcaattacagcttcaagaaatttaactggatatttt
tattatgttccaaattcaagacaactaaacattaacaaacaatatgatgttctaaaatga
ttatcagatcacaaaatcttaacatcaaaagatattattaaagcaaaaaatattgatgaa
gtaattcaacgtgttgaagagttaacaaaactaagagatagctttaaatatgatattgat
ggaatagttattaaagttaataatatagattgatatgaagaaattggttatacatctaaa
ttccctaaatgggcaacagcttataagtttcctgcaaacattaaaacatcgacacttaat
tcaattgatgtaacagttggtagaactggaagaattaattttatagctaatattacacca
attgaacttgatggttcaatcatttctaaagcaacacttcataatgcagaatacattata
gaaaaagacattagaattaatgatgttgtagaaatatataaagctggcgatattattcct
aagataattaaaccaataaaagaagaaagaaataaaaatagtgtagaatgaaaaccacct
cttcactgtccttgttgtaatagtgttttagtaaaatttgaaaatgaagttgatcaatat
tgtataaataccaattgtgaagataaaataatacaacaaatatcacacttttgtagtcgt
gatgctatgaatgttgatggtttatcagaagctattattgaaaagttttataaaaataat
ttaataaataatgtagctgatttatatgaaataaaaaataaaaaagaagcaatattaaat
ttggacattttaattaaagaaaaagcatttaataacattgttaatgcaatagaaaaaaca
aaagaaaattcactagagaaactaatctttggattaggaataagacatgttggttttaat
gttgcaaaacttgttgcaaaacgttttaaaagtatcaatggaatcattaatgcatctgtt
gatgatatattatcaattggtgaagttggagaaaaaattgctatatcaataactaattga
tttaatgatatagacaatataaaaacaattaaaagacttaaagaatatggtgttaatttc
aattatataaacgaatatgcagattttgttgtttctcctgaaaatgaaaaatataaaaat
aaatcatttgtaattacaggatcatttgaaaaaaacagaaatgaaataaaaaatatttta
gaaagtgtttatcatgcaaaagttacttcttcagtaacaaaaaatacagattatttaatt
attggtaattcgcctacacaaaacaaaattgaaaaggctaagagtttaaatattcctata
attgaaaaaccattctgaaataactaa
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