Mycobacteroides immunogenum: BAB75_17830
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Entry
BAB75_17830 CDS
T04755
Name
(GenBank) DNA ligase (NAD(+)) LigA
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
miz
Mycobacteroides immunogenum
Pathway
miz03030
DNA replication
miz03410
Base excision repair
miz03420
Nucleotide excision repair
miz03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
miz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BAB75_17830
03410 Base excision repair
BAB75_17830
03420 Nucleotide excision repair
BAB75_17830
03430 Mismatch repair
BAB75_17830
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
miz03032
]
BAB75_17830
03400 DNA repair and recombination proteins [BR:
miz03400
]
BAB75_17830
Enzymes [BR:
miz01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
BAB75_17830
DNA replication proteins [BR:
miz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
BAB75_17830
DNA repair and recombination proteins [BR:
miz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
BAB75_17830
NER (nucleotide excision repair)
GGR (global genome repair) factors
BAB75_17830
MMR (mismatch excision repair)
DNA ligase
BAB75_17830
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
BAB75_17830
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
BRCT
DNA_ligase_ZBD
HHH_5
Nlig-Ia
PTCB-BRCT
HHH
BRCT_2
Motif
Other DBs
NCBI-ProteinID:
ANO04957
UniProt:
A0A7V8RW65
LinkDB
All DBs
Position
complement(3617354..3619399)
Genome browser
AA seq
681 aa
AA seq
DB search
MDPDVQRQWRELADEVRGHQFRYYVKDAPVVSDGEFDRLLKELEALEAQYPELQTPDSPT
QLVGGAGFVTEFGSVDHLERMLSLDNAFSSEELTAWDARVRGDIGEEPEYLCELKIDGVA
LSLVYENGVLVRGATRGDGRSGEDVTLNARTIEDVPERLTESTKYPVPALLEVRGEVFFR
LEDFEALNASLVEESKPPFANPRNSAAGSLRQKNPAITARRRLRMICHGLGRTEGFSPES
LHDAYLALGEWGLPVSTHTTKVRGIAKVWERVNYWAEHRHDVEHEIDGLVVKVDTVALQR
RLGTTSRAPRWAIAYKYPPEEATTELLDIRVSVGRTGRVTPFAYMTPVKVAGSTVSLATL
HNASEVKRKGVLIGDTVVIRKAGDVIPEVLGPVADLRNGSEREFVMPTTCPECGTALAHE
KEGDADIRCPNSRSCPAQLRERVFHVAGRGAFDIEALGYEAAIALLSAGVIDDEGDLFSL
TADDLLRTDLFTTKNGSLSANGSRLLDNLDKAKQQPLWRVLVALSIRHVGPTAARALATE
FGDLEAIEGASVEQLAAVEGVGATIAAAVVDWFTVDWHRAIVDKWRAAGVRTADERDDSI
PRNLEGLSIVVTGSLPGFSRDEAKEAIIARGGKSASSVSKKTAFVVVGDSPGSKYDKAVE
LGLTILDEDGFRALLADGPPA
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
gtggatcctgacgtgcagcgccagtggcgcgagcttgccgacgaggtgcgtgggcaccag
ttccgctactacgtcaaggacgccccggtcgtttccgatggcgagttcgatcgcctcttg
aaggagcttgaggcgctggaagcgcagtatcccgagttgcagaccccggactcacccacg
cagctggtgggtggagcggggtttgtcaccgaattcggatcggttgaccacctggagcga
atgctgagtctggacaacgcattcagctccgaggagttgacagcctgggatgcccgggtg
cgtggcgatatcggtgaagagccggagtacttgtgtgagctgaagatcgacggtgtggcg
ctgtcgctggtctacgagaacggtgtgctggtgcggggagccacccgcggagacggtcgc
agcggtgaggacgtcaccctgaatgcccggaccatcgaggatgtgccggaaaggctcacg
gaatcaacaaaataccccgtacccgcgctcttggaggtgcgtggtgaggtgttcttccgg
ctggaggatttcgaggcgctgaacgcgtcgctggttgaggagagcaagccgccgttcgcc
aacccgcgcaacagtgccgcgggcagcctgcggcagaagaacccggcaattacggccagg
cgacggctgcggatgatctgtcatggactgggccgcaccgagggtttttcgccggagagc
cttcatgacgcgtatttggcgttgggggagtgggggttacccgtctcgacgcacaccacc
aaggtgcgcggtatcgcgaaggtgtgggaacgcgtcaactactgggccgagcatcggcac
gacgtggaacacgagatcgacggcctggtggtcaaggtcgatacggtcgcgctgcagcgc
cgtctcggcactacctcgcgtgcgccgcgctgggccatcgcctacaagtatccgcccgag
gaggcgaccaccgagctgctcgatatccgggtgagcgtgggccgcaccggccgggtcacc
ccgttcgcgtacatgaccccggtcaaggtggctgggtccacggtctccttggccaccctg
cacaacgcctccgaggtcaagcgcaaaggcgtactgatcggtgacaccgtggtgatccgc
aaggcgggcgacgtcattcctgaggtgctggggccggtcgccgatctgcgaaacggttcc
gagcgcgaattcgtcatgcccacaacatgtcccgaatgcggtaccgcgctggctcacgag
aaggagggcgacgccgacattcgttgccccaattcgcgtagctgccctgctcagttgcgt
gaacgggtcttccatgtggcggggcgcggcgccttcgatatcgaggccctcggctatgag
gcggcgatcgcgttgctctcggccggcgtcatcgacgacgaaggcgatctgttcagtctc
accgccgatgacctgctacgcaccgatttgttcaccaccaagaacggatcgttgtccgcc
aacggaagtcggctgctggacaacctcgacaaggcgaaacaacagccgctgtggcgagtg
ctggtggcgttgtcgatccggcatgtcgggcccactgcagcccgtgccttggccaccgag
ttcggcgacctggaggccatcgagggcgcgtccgtcgaacagctggccgccgtcgagggc
gtgggagccacgatcgctgccgcggtggtggattggttcaccgtcgattggcaccgcgcc
atcgtcgacaagtggcgcgccgcgggcgtgcgcactgccgacgaacgcgacgactccata
ccgcgcaatctcgaaggcctctccatcgttgtaaccggctcgctccccggcttttcgcgt
gatgaggccaaggaggccatcatcgcccggggcggcaagtccgcgagttcggtgtccaag
aagacggcgttcgtggtcgtcggagattcgccgggatccaagtacgacaaggcggtcgaa
cttgggctgaccatcctcgatgaggacggcttccgggccctgctggccgacgggccgccc
gcgtag
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integrated database retrieval system
