Mycolicibacter sinensis: JDM601_3952
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Entry
JDM601_3952 CDS
T01512
Symbol
nth
Name
(GenBank) endonuclease III Nth
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
mjd
Mycolicibacter sinensis
Pathway
mjd03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mjd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
JDM601_3952 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mjd03400
]
JDM601_3952 (nth)
Enzymes [BR:
mjd01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
JDM601_3952 (nth)
DNA repair and recombination proteins [BR:
mjd03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
JDM601_3952 (nth)
Prokaryotic type
JDM601_3952 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_8
HHH_5
Motif
Other DBs
NCBI-ProteinID:
AEF37952
UniProt:
F5YSW3
LinkDB
All DBs
Position
complement(4200621..4201367)
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AA seq
248 aa
AA seq
DB search
MDKAARAARTETRIGLVRRARRMNRTLAQAFPDAHCELDFTTPLELAVATVLSAQCTDVR
VNLTTPALFARYPAALDYAQADRTELEELIRPTGFYRNKATSLIKLGQALVERYDGELPD
TMDELVRLPGVGRKTANVILGNAFGVPGITVDTHFGRLVRRWDWTAEEDPVKVEHAVGEL
IERKEWTLLSHRVIFHGRRVCHSRKPACGVCVLARDCPSFGLGPTDRLEAAALVRGPETE
HLLALAGL
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
gtggacaaagccgcccgcgcggcgcggacggagacccggatcgggttggtgcggcgtgcc
cgccgaatgaatcggactctggcgcaggcctttccggatgcccactgcgagctggacttc
accacgccgctggagctcgccgtcgcgacggtgctgtcggcccaatgtaccgacgtgcgg
gtgaatctcacgacgccggcgctgttcgcccgctacccggccgcgctggactacgcgcag
gccgaccgcaccgagttggaggagctgatccggcccaccggcttctaccgcaacaaggcc
acctcactgatcaagctggggcaggcgctggtcgaacgctacgacggggaactgcccgac
accatggacgaactggtgcggctgcccggggtgggccgcaagaccgccaacgtcatcctg
ggcaacgcgttcggggtaccgggcatcaccgtcgacacccacttcgggcgcctggtgcga
cggtgggactggaccgccgaggaggacccggtcaaggtcgagcacgcggtcggcgaactg
atcgagcgcaaggaatggacgctgctgtcccaccgggtgatcttccacggccgtcgcgtc
tgccactcccgcaaaccggcttgcggcgtgtgcgtgctggccagggactgcccctcgttc
gggctgggacccaccgatcggctggaggccgccgcgctggtccggggtcccgagaccgag
catctgctggccctggccgggctgtag
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