Mucilaginibacter jinjuensis: PQO05_22615
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Entry
PQO05_22615 CDS
T08815
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
mjj
Mucilaginibacter jinjuensis
Pathway
mjj03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mjj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PQO05_22615 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mjj03400
]
PQO05_22615 (nth)
Enzymes [BR:
mjj01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
PQO05_22615 (nth)
DNA repair and recombination proteins [BR:
mjj03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PQO05_22615 (nth)
Prokaryotic type
PQO05_22615 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
HHH_5
RecR_HhH
HHH_8
HHH_3
DUF1889
IMS_HHH
Motif
Other DBs
NCBI-ProteinID:
WCT11537
LinkDB
All DBs
Position
5245380..5246141
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AA seq
253 aa
AA seq
DB search
MLKQERYRHFVDYFSKNQPNAVTELHYSNPFELLIAVILSAQCTDKRINQITPSLFERYP
TPESLAESTVEEIFSYIRSVSYPNNKAKHLSGMGQMLVEKFNSEVPNNMEDLQKLPGVGR
KTANVIVSVIFDVPAIAVDTHVFRVSNRIGLTTNARTPLAVEKQLIEHLPKSTLSVAHHW
LILHGRYICVARKPKCEICPLTYFCKYYEKNNTESALLKAEAAKQKKLEAAKKKKQNAAT
HKALKKISVDKNV
NT seq
762 nt
NT seq
+upstream
nt +downstream
nt
atgcttaaacaagaacgttaccgccactttgttgattatttttcgaagaaccagcccaat
gcagttacagaactgcactactcgaaccctttcgaactgctgatagcggtaatcctgtcg
gcacaatgcaccgataaacgcattaaccagatcaccccttccctttttgaacgttacccc
acgccagagtcactggccgaatcgaccgttgaagaaattttctcttacatccgcagtgta
agctatcctaataacaaggccaagcacctatcgggtatgggccagatgctggtagagaaa
ttcaacagcgaggtccctaataatatggaagatctgcaaaagcttccgggtgttggccgc
aaaacggctaacgttattgtctctgttatctttgacgttccggcaattgcggtagacact
cacgtttttcgcgtatctaatcgaataggtttaactactaatgcacgcacaccactggcg
gtagaaaagcagctgatagagcatctgccaaaatcaacgctaagcgtagctcaccactgg
ttgatactacatggccgctatatttgtgtagcacgtaaacctaaatgcgaaatatgcccc
ctcacctatttttgcaaatactacgagaaaaataatacagaaagcgccctattaaaagca
gaagctgctaaacaaaagaaactggaagccgccaaaaagaaaaagcaaaatgcagctaca
cataaggcattgaagaagattagtgtggataagaatgtttga
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