Maniola jurtina (meadow brown): 123864924
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Entry
123864924 CDS
T09254
Name
(RefSeq) 116 kDa U5 small nuclear ribonucleoprotein component
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
mju
Maniola jurtina (meadow brown)
Pathway
mju03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mju00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123864924
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mju03041
]
123864924
Spliceosome [BR:
mju03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
123864924
Complex C
U5 SnRNP specific factors
123864924
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
EFG_III
EFL1
MMR_HSR1
Roc
Ras
Motif
Other DBs
NCBI-GeneID:
123864924
NCBI-ProteinID:
XP_045761645
LinkDB
All DBs
Position
4:complement(11310611..11321281)
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AA seq
975 aa
AA seq
DB search
MDGDLYDEFGNYIGPDLESDSDDEQSVYGQDNRDADEDAMEEDEDADAEPEAAPMSVVLH
EDKRYYPQAVEVYGPDVETVVQEEDTQALDKPLVEPVKHKKFQMQEQQLPETTYDMEYMA
DMLDNTNLMRNITLMGHLHNGKTSFVDCLIRQTHPSTINHETTIPMRYTDTLFVEQERGV
SIKSMPVTLMLKDIKGKSHLLNIMDTPGHVNFSDEVTAALRISDGAVLFVDAAEGIMLNT
ERLLRHAVQERVPLTVCINKIDRLILELKLPPADAYYKLRHIIDEINSMVETHQPQDNPE
EPATVFSPLLGNVCFASSLYDVCFTLESFAAMYASAHDCGLRASDMAAWLWGDIYFNAKT
RRFTKKQPHASAQRSFVEFILEPLYKIFAQVVGDVDDTLPAVLSELGIKLTKQEAKLNVR
PLLRLVCSRFFGDFCGFVAMVIHHVPSPLDAAPRKVAHAYRGSAGPLHTDMINCDQSGRL
VAHTTKMYPTDDCTFFLVLARIMSGTLYAGQTVRVLGENYSTQDEEDSRIMNVGRLWIYE
ARYKVELNRVPAGCWALIEGIDQPIVKTCTLVSADEEEELHTFKPLRFNTQAVVKIAVEP
VNPSELPKMLDGLRKVNKSYPVLSTRVEESGEHVVLGTGELYLDCVMHDLRNMYSEIDIK
VADPVVSFCETVVETSSLKCFAETPNKRNKLTMIAEPLERGLAEDIEAGAVCVTWDRRRL
GEFFQTKYDWDLLAARSIWAFGPDATGPNILVDDTLPSEVDKHLLASVKDSIVQGFQWGT
REGPLCEEPIRNVKFKILDAVIAQEPLHRGGGQIIPTARRVAYSAFLMATPRLMEPYLFV
EVQAPADCVSAVYTVLAKRRGHVTQDAPVPGSPLYTIKAFVPAIDSFGFETDLRTHTQGQ
AFCLQVFHHWQIVPGDPLDKSIVIRPLEPQPATHLAREFMIKTRRRKGLSEDVSINKFFD
DPMLLELARQDVQFN
NT seq
2928 nt
NT seq
+upstream
nt +downstream
nt
atggacggggatttatacgatgaatttggcaactatatcggcccggacctagaatcggac
tctgatgatgagcagagtgtttacggacaggataatcgcgatgcggacgaggatgcgatg
gaggaggacgaggacgccgatgccgagcctgaagcggctccaatgtcggttgttctacat
gaagataagagatactatccccaagcagtagaagtctatggcccagatgtagaaactgta
gtacaagaggaggacacacaagcactggacaagcccctcgtggagccggttaaacacaag
aagttccaaatgcaagaacagcagctaccagagacgacatatgatatggagtacatggca
gatatgctggataatactaacttgatgaggaacatcactttgatgggacacttacataat
ggtaaaacctccttcgtggactgtctgatccggcaaacccaccccagcacaataaaccat
gagacaaccataccaatgcgatacacggacacactgtttgtggagcaagaacgtggtgtc
tccatcaagtccatgccggtcacactgatgctcaaggatattaaggggaaatcacattta
ctgaacattatggacacacctggacatgttaacttcagtgatgaggttactgctgcactt
aggatatccgatggcgcagtactattcgtcgacgcagcagaaggcataatgctcaacaca
gagcgcctcttgcgtcacgcagtgcaggagcgcgtaccgctcactgtatgcatcaataag
atcgaccgccttatactggaactgaagctaccacccgcggacgcgtattacaagctgcgg
cacatcatagatgagatcaactccatggtggagacccaccagccacaagacaacccagag
gagcctgccactgtgttctcaccattattaggcaacgtctgcttcgcgtcatcgctctac
gacgtgtgttttacgctggaatcgttcgccgcgatgtacgcgtccgcacatgactgcggc
ctacgcgcgagcgacatggcggcatggctgtggggcgatatatacttcaacgctaagacg
cgccgtttcaccaagaagcaaccacacgcttctgcgcagaggagtttcgtagagtttata
ctcgagccgctctacaagatctttgctcaggtggtaggcgacgtggacgacactctgccc
gcagtgctgtcggagctaggcatcaagttaacaaagcaagaggccaagctgaacgtgcgc
ccgctgctgaggctggtttgcagcagattcttcggtgacttttgtggtttcgtggctatg
gtgatacaccacgtgccgtcgccactagacgcggcgccgcgcaaggtcgcgcacgcgtac
cgcggctccgcggggccgctgcacaccgatatgatcaactgcgatcagtccggtaggctg
gtcgctcataccaccaagatgtatcccactgatgactgcactttcttcttggtgttagca
cgaataatgtcgggtacattgtacgcggggcaaacagttcgagtgttgggagagaactac
agcacgcaagacgaagaggactcacgtattatgaacgttggacgactgtggatatacgaa
gcgcggtataaggtggaactaaatcgcgtaccggccggttgttgggctctcatcgagggt
atcgaccagcccatagtgaaaacctgtactctggtctcggctgatgaagaagaagagctg
cacaccttcaagcccctgcgcttcaacacgcaagccgtggtcaagatagccgtcgagccc
gtcaacccttccgagttgcctaaaatgctggacggccttaggaaggtcaacaaatcatac
ccggttctatcgactcgcgtggaagagagtggggaacacgtagtgctaggcactggagag
ctatatctggactgcgtcatgcacgacctgcgtaatatgtattccgaaatcgatatcaaa
gttgccgacccagtggtatcgttctgcgagacggtcgtggaaacatcgtcgctcaagtgt
ttcgcggagacgccgaacaaacgcaacaaattgacgatgatcgcggaaccattggagcgg
ggtctcgccgaggacatcgaggcgggcgccgtgtgtgtcacgtgggaccggcggcgtctc
ggggagttcttccagaccaagtacgactgggatttgctggcagcgcgttcgatctgggcc
ttcggacccgatgcgacagggccgaatatcttggtagacgacacattgccctccgaagtg
gacaagcatctactggcctccgttaaagacagcattgttcaaggtttccagtggggcacg
agagaagggccattatgcgaggagccgatcaggaatgtcaagttcaagattttggatgct
gtgatagctcaagaacctttgcaccgcggtggtggtcagatcattcctactgcgagaagg
gtggcatactctgcgtttctgatggcaactcctcgcctgatggagccatatttattcgtg
gaagtgcaggcgccagccgactgtgtgtccgctgtgtacactgtactggcgaagagaaga
ggccacgtgacgcaagacgctccagtgcccggctcgccgctatacaccatcaaagcgttc
gtgcccgcgatagactcgttcggcttcgagacggacctgcgcacgcacacacaaggccag
gccttctgtctacaagtgttccaccactggcagatagtgccgggcgatccactcgataag
agcattgtcattagacctttggaaccgcagccagccacgcatctagcacgtgaattcatg
atcaagacacgcagacggaaaggcctgagcgaggacgtgtctatcaacaaattcttcgac
gaccctatgttgctggagctcgcaagacaagatgtacaattcaattaa
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