Manis javanica (Malayan pangolin): 108390300 Help Entry 108390300         CDS       T06054                                  Symbol TRAF6 Name (RefSeq) TNF receptor-associated factor 6   KO K03175   TNF receptor-associated factor 6 [EC:2.3.2.27] Organism mjv  Manis javanica (Malayan pangolin) Pathway mjv04010   MAPK signaling pathway mjv04064   NF-kappa B signaling pathway mjv04120   Ubiquitin mediated proteolysis mjv04140   Autophagy - animal mjv04144   Endocytosis mjv04380   Osteoclast differentiation mjv04620   Toll-like receptor signaling pathway mjv04621   NOD-like receptor signaling pathway mjv04622   RIG-I-like receptor signaling pathway mjv04657   IL-17 signaling pathway mjv04722   Neurotrophin signaling pathway mjv04936   Alcoholic liver disease mjv05132   Salmonella infection mjv05133   Pertussis mjv05135   Yersinia infection mjv05140   Leishmaniasis mjv05142   Chagas disease mjv05145   Toxoplasmosis mjv05152   Tuberculosis mjv05160   Hepatitis C mjv05161   Hepatitis B mjv05162   Measles mjv05168   Herpes simplex virus 1 infection mjv05169   Epstein-Barr virus infection mjv05170   Human immunodeficiency virus 1 infection mjv05171   Coronavirus disease - COVID-19 mjv05200   Pathways in cancer mjv05222   Small cell lung cancer mjv05235   PD-L1 expression and PD-1 checkpoint pathway in cancer mjv05417   Lipid and atherosclerosis Brite KEGG Orthology (KO) [BR:mjv00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    04120 Ubiquitin mediated proteolysis     108390300 (TRAF6)  09130 Environmental Information Processing   09132 Signal transduction    04010 MAPK signaling pathway     108390300 (TRAF6)    04064 NF-kappa B signaling pathway     108390300 (TRAF6)  09140 Cellular Processes   09141 Transport and catabolism    04144 Endocytosis     108390300 (TRAF6)    04140 Autophagy - animal     108390300 (TRAF6)  09150 Organismal Systems   09151 Immune system    04620 Toll-like receptor signaling pathway     108390300 (TRAF6)    04621 NOD-like receptor signaling pathway     108390300 (TRAF6)    04622 RIG-I-like receptor signaling pathway     108390300 (TRAF6)    04657 IL-17 signaling pathway     108390300 (TRAF6)   09156 Nervous system    04722 Neurotrophin signaling pathway     108390300 (TRAF6)   09158 Development and regeneration    04380 Osteoclast differentiation     108390300 (TRAF6)  09160 Human Diseases   09161 Cancer: overview    05200 Pathways in cancer     108390300 (TRAF6)    05235 PD-L1 expression and PD-1 checkpoint pathway in cancer     108390300 (TRAF6)   09162 Cancer: specific types    05222 Small cell lung cancer     108390300 (TRAF6)   09172 Infectious disease: viral    05170 Human immunodeficiency virus 1 infection     108390300 (TRAF6)    05161 Hepatitis B     108390300 (TRAF6)    05160 Hepatitis C     108390300 (TRAF6)    05171 Coronavirus disease - COVID-19     108390300 (TRAF6)    05162 Measles     108390300 (TRAF6)    05168 Herpes simplex virus 1 infection     108390300 (TRAF6)    05169 Epstein-Barr virus infection     108390300 (TRAF6)   09171 Infectious disease: bacterial    05132 Salmonella infection     108390300 (TRAF6)    05135 Yersinia infection     108390300 (TRAF6)    05133 Pertussis     108390300 (TRAF6)    05152 Tuberculosis     108390300 (TRAF6)   09174 Infectious disease: parasitic    05145 Toxoplasmosis     108390300 (TRAF6)    05140 Leishmaniasis     108390300 (TRAF6)    05142 Chagas disease     108390300 (TRAF6)   09166 Cardiovascular disease    05417 Lipid and atherosclerosis     108390300 (TRAF6)   09167 Endocrine and metabolic disease    04936 Alcoholic liver disease     108390300 (TRAF6)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:mjv04131]     108390300 (TRAF6)    04121 Ubiquitin system [BR:mjv04121]     108390300 (TRAF6) Enzymes [BR:mjv01000]  2. Transferases   2.3  Acyltransferases    2.3.2  Aminoacyltransferases     2.3.2.27  RING-type E3 ubiquitin transferase      108390300 (TRAF6) Membrane trafficking [BR:mjv04131]  Endocytosis   Clathrin-mediated endocytosis    Ubiquitin E3 ligases     108390300 (TRAF6) Ubiquitin system [BR:mjv04121]  Ubiquitin ligases (E3)   Single Ring-finger type E3    TRAF proteins     108390300 (TRAF6) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  TRAF-mep_MATH MATH_2 TRAF6_Z2 zf-C3HC4_2 zf-C3HC4 zf-RING_UBOX zf-RING_2 zf-C3HC4_3 zf-C3HC4_4 zf-RING_5 TRAF3_RING zf-TRAF SlyX RING_XB3-XBAT31 U-box zf-RING_11 PUMA_CC DUF16 Spc29 CENP-Q DUF7310 UPF0242 PspA_IM30 Motif Other DBs NCBI-GeneID:  108390300 NCBI-ProteinID:  XP_036876350 LinkDB All DBs Position Unknown AA seq 516 aa AA seqDB search MSLLNCENSCGSSQSEGDCCAAMASSCSTAAKDDSVSGTASTGNLSSSFVEEIQGYDVEF DPPLESKYECPICLMALREAVQTPCGHRFCKACIIKSIRDAGHKCPVDNEILLENQLFPD NFAKREILSLMVKCPNEGCLHKMELRHLEDHQAHCEFALMNCLQCQHLFQKCQLNIHILK ECPRRQVSCINCAALMAFEEKEIHDQTCPLANVICEYCDTMLIREQMQRNHLARHLQENT QSHMRMLAQAVQSLSLALAPMPPIRDMFPYDSAPVSRASSGCHPEVENFHEIIQQLEGRL VRQDHQIRELTAKMETQSMYVNELKRTIRTLEDKVAEIEAQQCNGIYIWKIGNFGMHLKS QEEEKPVVIHSPGFYTGKPGYKLCMRLHLQLPNAQRCANYISLFVHTMQGEYDSHLPWPF QGTIRLTILDQSEAPIRQNHEEIMDAKPELLAFQRPTIPRNPKGFGYVTFMHLEALRQRT FIKDDTLLVRCEVSTRFDMGSLRREGFQPRSTDAGV NT seq 1551 nt NT seq  +upstreamnt  +downstreamnt atgagtctgctaaactgtgaaaacagctgtggatccagccagtctgaaggtgactgctgt gcagccatggccagctcctgtagcactgcagcaaaagacgacagtgtgagtggaactgcc agcacagggaacctctccagctcttttgtagaagagatccaggggtatgatgtggagttt gacccacccctggaaagcaagtatgaatgccccatctgcttgatggcgttacgggaagca gtgcaaacaccctgtggccacaggttctgcaaagcctgtatcatcaaatcaataagggat gcaggtcacaaatgtccagttgacaatgaaatactgctggaaaatcaactatttcctgac aactttgcaaaacgagagattctttctctgatggtgaagtgtccaaatgaaggttgtttg cacaagatggagctgaggcatcttgaggatcaccaagcacattgtgagtttgctctcatg aattgtctccaatgtcagcatctcttccaaaaatgccaacttaatattcacattctcaag gagtgcccaaggagacaggtttcttgtataaactgtgctgcattgatggcatttgaagaa aaagagatccatgatcagacctgtcctttggcaaatgtcatctgtgaatactgtgatacc atgctcatcagagaacagatgcagaggaatcacttggcacgccatctacaagagaatact cagtcacacatgagaatgttggcccaggctgtgcagagcttaagccttgctttagctccc atgcctcccatacgtgatatgtttccatatgattctgcccctgtgtcccgggcttcctct ggatgtcacccagaggtcgagaatttccatgaaatcattcaacagttagagggtcgcctt gtaagacaagaccatcaaatccgagagctgactgctaaaatggaaacacagagcatgtat gtaaatgagctcaaacgaactattcgaacacttgaagacaaagttgccgaaatagaagca cagcagtgcaatgggatttacatctggaagattggtaactttgggatgcacttgaaatct caagaagaggagaaacctgttgtcattcatagccctggattctacacaggcaaacccggg tacaaactgtgcatgcgcctgcaccttcagcttccaaatgcccagcgctgtgcaaactac atatccctttttgtccacacaatgcaaggggagtatgacagccacctcccttggcccttc cagggtacaatacgccttacaattcttgatcagtctgaagcacctataaggcaaaaccat gaagagataatggatgccaaaccagagctgcttgccttccagagacccacaatcccacgg aacccaaaaggttttggctatgtgacttttatgcacctagaagccctaagacaaagaacc ttcattaaggatgatactttgttagtacgctgtgaggtctccacccgcttcgacatgggt agtcttcggagggagggtttccagccacggagtactgatgcaggggtatag

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