Manis javanica (Malayan pangolin): 108401388
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Entry
108401388 CDS
T06054
Symbol
DHX9
Name
(RefSeq) ATP-dependent RNA helicase A isoform X1
KO
K13184
ATP-dependent RNA/DNA helicase DHX9 [EC:
5.6.2.6
5.6.2.4
]
Organism
mjv
Manis javanica (Malayan pangolin)
Brite
KEGG Orthology (KO) [BR:
mjv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mjv03041
]
108401388 (DHX9)
03012 Translation factors [BR:
mjv03012
]
108401388 (DHX9)
Enzymes [BR:
mjv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
108401388 (DHX9)
5.6.2.6 RNA 3'-5' helicase
108401388 (DHX9)
Spliceosome [BR:
mjv03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
108401388 (DHX9)
Translation factors [BR:
mjv03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
108401388 (DHX9)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
dsrm
OB_NTP_bind
Helicase_C
DEAD
WHD_HA2
HA2_C
RNA_hel_CTD
Dicer_dimer
ResIII
nSTAND3
AAA_19
AAA_14
ATPase
AAA_22
PhoH
Motif
Other DBs
NCBI-GeneID:
108401388
NCBI-ProteinID:
XP_073072968
LinkDB
All DBs
Position
11:90605759..90866679
Genome browser
AA seq
1263 aa
AA seq
DB search
MGDVKNFLYAWCGKKKMTPSYEIRAVGNKNRQKFMCEVRVEGYNYTGMGNSTNKKDAQSN
AARDFVNYLVRINEVKSEEVPAVGVAPPPPPLTDTPDTASTGEGLPTTMGGPLPPHLAIK
AENNSGIGASGYGVSGPTWDRGANLKDYYARKEEQEVQATLESEEVDLNAGLHGNWTLEN
AKARLNQYFQKEKIQGEYKYTQVGPDHNRSFIAEMTIYIKQLGRRIFAREHGSNKKLAAQ
SCALSLVRQLYHLGVIEAYSGLTKKKEGETVEPYNVNLSQDLEHQLQNIIQELSLEIVPS
PDDPSVPVTLNLGKLAHFEPSQRQSQMGVVPWSPPQSNWNPWTSSNIDEGPLAYATPEQI
SMDLKNELMYQLEQDHDLQAILQERELLPVKKFESEILEAISQNSVVIIRGATGCGKTTQ
VPQFILDDFIQNDRAAECNIVVTQPRRISAVSVAERVAYERGEEPGKSCGYSVRFESILP
RPHASIMFCTVGVLLRKLEAGIRGISHVIVDEIHERDINTDFLLVVLRDVVQAYPEVRIV
LMSATIDTSMFCEYFFNCPIIEVYGRTYPVQEYFLEDCIQMTHFVPPPKDKKKKDKDEDG
GEDDDANCNLICGDEYGQETKMSMAQLNEKETPFELIEALLKYIETLNVPGAVLVFLPGW
NLIYTMQKHLEMNPHFGSHRYQILPLHSQIPREEQRKVFDPVPGGVTKVILSTNIAETSI
TINDVVYVIDSCKQKVKLFTAHNNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSRA
RFERLETHMTPEMFRTPLHEIALSIKLLRLGGIGQFLAKAIEPPPLDAVIEAEHTLRELD
ALDANDELTPLGRILAKLPIEPRLGKMMIMGCIFYVGDAVCTISAATCFPEPFISEGKRL
GYIHRNFAGNRFSDHVALLSVFQAWDDARMGGEEAEIRFCEHKRLNMATLRMTWEAKVQL
KEILINSGFPEDCLLTQVFTNTGPDNNLDVVISLLAFGVYPNVCYHKEKRKILTTEGRNA
LIHKSSVNCPFSSQDMKYPSPFFVFGEKIRTRAISAKGMTLVTPLQLLLFASKKVQSDGQ
IVLVDDWIRLQISHEAAACITALRAAMEALVVEVTKQPDIISQLDPVNERMLNIIRQISR
PSAAGINLMIGNTRYGDGPRPPKMARYDNGSGYRRGGAGYGGSYGASGGYGGGGYGGSSS
SYRGGYGGGYRGGPRGGYRGGSGGDYRGSSGGGYRRSGGFQRGGGGRGGYGSGYFGQGRG
GGY
NT seq
3792 nt
NT seq
+upstream
nt +downstream
nt
atgggtgatgtcaaaaattttttgtatgcctggtgtggcaaaaagaagatgaccccatcc
tatgaaattagagcagtggggaacaaaaacaggcagaaattcatgtgtgaggttcgagtg
gagggatataattacactggcatgggcaattcaacgaacaaaaaagatgctcagagtaat
gctgccagagactttgttaactatttggttcgaataaatgaagtgaagagtgaagaagtg
ccagctgttggggtagcaccccctccgcccccacttactgatacacctgacacagcaagt
actggtgaaggtttaccaacaaccatgggaggacctcttcctccacatctggctatcaag
gcagaaaataattctggaattggggcttctggctatggcgtttcagggcccacctgggat
cgcggagccaatttgaaggattattacgcgagaaaggaagaacaagaagtacaagcgact
ctagaatcagaagaagtagatttaaatgctgggcttcatgggaactggaccttggaaaat
gctaaggctcgtctgaaccagtatttccaaaaggaaaagatccaaggagaatataagtac
acccaagtgggtcctgatcacaacaggagctttattgcagaaatgaccatttatatcaag
cagctgggcagaaggatttttgcacgtgaacatggatcaaataaaaagctggcagcacag
tcatgtgccctgtcccttgtcagacaactctaccatcttggagtgattgaagcttactct
ggacttacaaagaagaaagaaggagagacagtggagccttacaatgtgaacctctctcaa
gatttagagcatcagctgcaaaacatcattcaagagctaagtcttgagattgtgccctca
cctgatgatccttccgtgcctgttacactcaaccttggcaaattggctcactttgaacca
tctcagcgacaaagccaaatgggtgtggttccttggtcacctccacagtctaactggaat
ccttggactagtagcaacattgatgaggggcccctggcttatgctactccagaacaaata
agcatggatctcaagaatgaactaatgtaccagctggaacaggatcatgatttgcaagca
atcttacaggagagagaattactgcctgtgaagaaatttgaaagtgaaatcctagaagca
attagtcaaaattcagttgtcattatccgaggcgctactggatgtggtaaaaccacacaa
gttccccaatttattctagatgactttatccagaatgaccgagccgcagagtgtaatatt
gtagtaactcagcctagaagaatcagtgcagtttctgtggcagaacgagttgcatatgag
agaggagaagagcctggaaaaagctgtggctatagtgttcgatttgagtctatacttccc
cgtcctcatgccagtataatgttttgtactgtaggtgtgctcctaagaaaattagaagca
ggcattcgaggaatcagtcatgtaattgtagatgaaatacatgaaagagacataaatact
gacttccttttggtagtgttgcgtgatgtagttcaggcttatcctgaagttcgcattgtt
ctcatgtctgctactattgataccagcatgttctgtgaatatttcttcaactgccccatc
attgaagtttatgggaggacatacccagttcaagaatattttttggaagactgtattcag
atgacccactttgttcctccaccaaaggacaagaagaagaaggataaggatgaagatggt
ggcgaggatgatgatgcaaattgcaacctgatttgtggtgacgaatatggtcaagaaaca
aagatgagcatggctcagttgaatgaaaaggaaactcctttcgaactcattgaggctcta
cttaagtacatcgagacccttaatgttcccggagctgtgttggtctttcttcctggctgg
aatttaatttataccatgcagaagcatttggaaatgaatccacattttggaagccacagg
taccagattctgcctctgcattctcagattcctcgagaggagcagcgcaaagtatttgat
ccagtaccaggtggagtaaccaaggttattttgtccacaaatattgcggagaccagcatt
accataaatgatgttgtttatgtcattgactcctgcaagcagaaagtgaagctgttcact
gctcacaacaatatgaccaactatgccacagtgtgggcatctaaaacaaatctcgagcag
cggaaaggacgagctggccgtgtgcggcctggattttgctttcacctctgtagtcgagct
cgatttgagagacttgaaacacacatgacgccagagatgttccgaacaccattgcacgaa
attgctttgagcataaagcttctgcgtctgggagggattggccagttcctggccaaggcg
atcgaacccccgcctttggatgctgtgattgaagcagagcacactcttagagagcttgat
gcattagatgccaacgatgagctgactcctctgggacgaatcctggctaaactccccatt
gaacctcgtctgggcaaaatgatgataatggggtgtattttctatgtgggagatgctgtc
tgtaccatctctgctgccacctgctttccagagcctttcatcagtgaaggaaagcgactg
ggttatatccatagaaattttgctggcaacagattttctgatcatgtggcccttttatca
gtattccaagcctgggatgatgctagaatgggtggagaggaagcagagatacgtttttgt
gagcacaaaagactcaatatggccacactaagaatgacctgggaggccaaagttcagctc
aaagagatcctgattaattctgggtttccagaagattgtttattaacacaagtgtttact
aacaccggaccagataataatttggatgttgttatctctctcctggcctttggtgtatac
cccaatgtgtgctatcataaggagaagagaaagattctcaccactgaagggcgtaatgca
ctgatccacaagtcatctgttaattgtccttttagcagccaagacatgaagtacccatct
cccttctttgtatttggtgaaaagattcgaacccgggccatctctgctaaaggcatgacc
ttagtcaccccactgcagctgctgctctttgcctccaagaaagtccagtctgatgggcag
attgtgcttgtagatgactggatcagactgcaaatatctcatgaagctgctgcctgtatc
actgctctccgggcagccatggaggctctggttgttgaagtaaccaaacagcctgatatc
atcagccagttggaccctgttaatgaacgtatgctgaacataatccgtcagatctctagg
ccttctgctgctggtatcaaccttatgattgggaatacacggtatggagatggcccacgt
cctcccaagatggcccgatatgacaatggaagtggctacagaaggggaggtgctggctat
ggtggaagctatggggccagtggaggctacggaggtggtggttacggtggcagctccagc
tcctatcggggagggtatggtggaggttacagaggcggtccccgaggtggctacagaggt
ggctcagggggagactacagagggtctagtggaggagggtacaggagatctgggggattc
cagcgaggaggaggtggcagggggggctatgggagtggatactttggacaaggaagaggt
ggtggctattaa
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integrated database retrieval system
