Manis javanica (Malayan pangolin): 108403677
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Entry
108403677 CDS
T06054
Symbol
EFTUD2
Name
(RefSeq) 116 kDa U5 small nuclear ribonucleoprotein component
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
mjv
Manis javanica (Malayan pangolin)
Pathway
mjv03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mjv00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108403677 (EFTUD2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mjv03041
]
108403677 (EFTUD2)
Spliceosome [BR:
mjv03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
108403677 (EFTUD2)
Complex C
U5 SnRNP specific factors
108403677 (EFTUD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
EFG_III
EFL1
EF-G_D2
Motif
Other DBs
NCBI-GeneID:
108403677
NCBI-ProteinID:
XP_017526460
LinkDB
All DBs
Position
Unknown
AA seq
972 aa
AA seq
DB search
MDTDLYDEFGNYIGPELDSDEDDDELGRETKDLDEMDDDDDDEDVGDHDEDHPGMEVVLH
EDKKYYPTAEEVYGPEVETIVQEEDTQPLTEPIIKPVKTKKFTLMEQTLPVTVYEMDFLA
DLMDNSELIRNVTLCGHLHHGKTCFVDCLIEQTHPEIRKRYDQDLCYTDILFTEQERGVG
IKSTPVTVVLPDTKGKSYLFNIMDTPGHVNFSDEVTAGLRISDGVVLFIDAAEGVMLNTE
RLIKHAVQERLAVTVCINKIDRLILELKLPPTDAYYKLRHIVDEVNGLISMYSTDENLIL
SPLLGNVCFSSSQYSICFTLGSFAKIYADTFGDINYQEFAKRLWGDIYFNPKTRKFTKKA
PTSSSQRSFVEFILEPLYKILAQVVGDVDTSLPRTLDELGIHLTKEELKLNIRPLLRLVC
KKFFGEFTGFVDMCVQHIPSPKVGAKPKIEHTYTGGVDSDLGEAMSDCDPDGPLMCHTTK
MYSTDDGVQFHAFGRVLSGTIHAGQPVKVLGENYTLEDEEDSQICTVGRLWISVARYHIE
VNRVPAGNWVLIEGVDQPIVKTATITEPRGNEEAQIFRPLKFNTTSVIKIAVEPVNPSEL
PKMLDGLRKVNKSYPSLTTKVEESGEHVILGTGELYLDCVMHDLRKMYSEIDIKVADPVV
TFCETVVETSSLKCFAETPNKKNKITMIAEPLEKGLAEDIENEVVQITWNRKKLGEFFQT
KYDWDLLAARSIWAFGPDATGPNILVDDTLPSEVDKALLGSVKDSIVQGFQWGTREGPLC
DELIRNVKFKILDAVVAQEPLHRGGGQIIPTARRVVYSAFLMATPRLMEPYYFVEVQAPA
DCVSAVYTVLARRRGHVTQDAPIPGSPLYTIKAFIPAIDSFGFETDLRTHTQGQAFSLSV
FHHWQIVPGDPLDKSIVIRPLEPQPAPHLAREFMIKTRRRKGLSEDVSISKFFDDPMLLE
LAKQDVVLNYPM
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
atggatactgacttgtatgatgagtttgggaattatattggaccagaacttgattctgat
gaagatgatgatgaattgggcagagagaccaaagatcttgatgagatggatgacgatgat
gatgacgaagatgtaggagatcatgatgaagatcaccctgggatggaggtggtgctgcat
gaggacaagaagtattaccccacagctgaggaggtgtatggtcctgaggtggagaccata
gttcaggaggaagatacccagcctctcacagaacccattattaagccagtgaaaaccaag
aaattcactttgatggagcagacattacctgtcacggtgtatgaaatggatttcttggca
gatctgatggataactcagagctcatcagaaatgtgaccctttgtggtcatctccaccat
ggcaagacatgttttgtagattgcttaatagagcagactcatccagaaatcagaaagcgc
tatgatcaagatctgtgctatactgacatcctcttcacagagcaggagagaggtgttggc
atcaaaagcactcctgtgacagtggtcttgccagacaccaaaggaaaatcttacctcttc
aatatcatggacactccaggacatgtgaatttttctgatgaagtcacggctggcttgcgc
atctcagatggagtggtccttttcatcgatgctgctgagggcgtgatgctgaacacagag
cgactgatcaagcatgcagtgcaagaaaggctggccgtcaccgtgtgcatcaacaagatt
gaccggctgatcctggagctgaagctgcccccgacagatgcttattacaagctgcgccac
attgtagatgaggtcaatggattgataagcatgtattctactgatgagaacctgatcctt
tccccactcctgggcaacgtctgcttctccagctcccagtacagcatctgcttcacgctg
ggctcctttgccaagatctatgctgacacctttggtgacattaactaccaggaatttgct
aaaagactatggggtgacatctacttcaaccccaagacgcgaaagttcacaaaaaaggcc
cctaccagcagctcccagaggagcttcgtggagttcattttggagcccctttataagatc
ctcgctcaggttgtgggtgacgtggacaccagcctcccaaggaccttggacgagctcggc
atccacctgaccaaggaggagctgaagctcaacatccgccccctgctcaggctggtctgc
aaaaaattctttggcgagtttacaggcttcgtggacatgtgtgtgcagcatatcccctct
ccaaaggtgggcgccaagcccaagatcgagcacacctacactggcggtgtggactctgac
ctcggcgaggctatgagtgactgtgaccctgatggtcccctgatgtgccacactaccaag
atgtacagcacagatgatggagttcagtttcatgcctttggccgggtgctcagcggcacc
atccatgctgggcagcccgtgaaggtgctgggggagaactacaccctggaggatgaggag
gactcccagatctgcactgtgggccgcctgtggatctctgtggccaggtaccacatcgaa
gtgaaccgcgttcctgctggcaattgggttctgattgaaggtgttgatcaaccaattgtg
aagacagcaactataactgaaccccgaggcaatgaggaggctcagattttccggcccttg
aagttcaacaccacatccgtcatcaagattgctgtggaaccggtcaacccctcagagctg
cccaagatgctggatggtctacgcaaggtcaacaagagctatccgtccctcaccaccaag
gtagaagaatctggtgagcatgtgattctgggtactggggagctctacctagactgcgtg
atgcacgatttgcggaagatgtactcggagatagacatcaaggtggcagaccctgttgtc
acattttgtgagacagtggtggaaacatcctccctcaagtgctttgctgaaacacccaat
aagaagaacaagatcaccatgatcgctgagcctcttgagaagggccttgctgaggacata
gagaacgaggtggtccagatcacctggaataggaagaagttgggagagttcttccagacc
aagtatgattgggatctgctggctgcccgctccatctgggcttttggccctgacgccact
ggccccaacatcctggtggatgataccttgccatctgaggtagacaaggctcttcttggc
tcagtgaaggacagcattgttcaaggtttccagtggggaacaagggaggggcccctctgt
gatgaattgattcgaaatgtcaagtttaagatcctggatgcagtggttgctcaggagccc
ctgcaccggggcgggggccaaatcatccccacagccaggagagtcgtctattctgccttc
ctcatggccactcctcgtctgatggagccctactacttcgtggaggtccaggcccctgca
gattgtgtctctgccgtttatactgtcctggccagacgcagggggcatgtgactcaggat
gcacccatcccaggctctcctctctataccatcaaagctttcatcccagccatcgactct
tttggctttgagactgatctgcggactcacacccaagggcaggccttttccttgtctgtc
ttccaccattggcagattgtacccggtgatcctttggacaagagcattgtcatccgcccc
ttggagccacagccagctccccacctggctcgagaattcatgatcaaaacccgccgtagg
aagggcctgagcgaagacgtcagcatcagcaagttcttcgatgaccctatgctgctggag
ctcgccaagcaggatgtcgtgctcaattaccccatgtga
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integrated database retrieval system
