KEGG   Manis javanica (Malayan pangolin): 108404560
Entry
108404560         CDS       T06054                                 
Symbol
CXCL12
Name
(RefSeq) LOW QUALITY PROTEIN: stromal cell-derived factor 1
  KO
K10031  C-X-C motif chemokine 12
Organism
mjv  Manis javanica (Malayan pangolin)
Pathway
mjv04060  Cytokine-cytokine receptor interaction
mjv04061  Viral protein interaction with cytokine and cytokine receptor
mjv04062  Chemokine signaling pathway
mjv04064  NF-kappa B signaling pathway
mjv04360  Axon guidance
mjv04670  Leukocyte transendothelial migration
mjv04672  Intestinal immune network for IgA production
mjv04810  Regulation of actin cytoskeleton
mjv05163  Human cytomegalovirus infection
mjv05200  Pathways in cancer
mjv05323  Rheumatoid arthritis
Brite
KEGG Orthology (KO) [BR:mjv00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04064 NF-kappa B signaling pathway
    108404560 (CXCL12)
  09133 Signaling molecules and interaction
   04060 Cytokine-cytokine receptor interaction
    108404560 (CXCL12)
   04061 Viral protein interaction with cytokine and cytokine receptor
    108404560 (CXCL12)
 09140 Cellular Processes
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    108404560 (CXCL12)
 09150 Organismal Systems
  09151 Immune system
   04670 Leukocyte transendothelial migration
    108404560 (CXCL12)
   04672 Intestinal immune network for IgA production
    108404560 (CXCL12)
   04062 Chemokine signaling pathway
    108404560 (CXCL12)
  09158 Development and regeneration
   04360 Axon guidance
    108404560 (CXCL12)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    108404560 (CXCL12)
  09172 Infectious disease: viral
   05163 Human cytomegalovirus infection
    108404560 (CXCL12)
  09163 Immune disease
   05323 Rheumatoid arthritis
    108404560 (CXCL12)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04052 Cytokines and neuropeptides [BR:mjv04052]
    108404560 (CXCL12)
   00536 Glycosaminoglycan binding proteins [BR:mjv00536]
    108404560 (CXCL12)
Cytokines and neuropeptides [BR:mjv04052]
 Cytokines
  Chemokines
   108404560 (CXCL12)
Glycosaminoglycan binding proteins [BR:mjv00536]
 Heparan sulfate / Heparin
  Chemokines
   108404560 (CXCL12)
SSDB
Motif
Pfam: IL8
Other DBs
NCBI-GeneID: 108404560
NCBI-ProteinID: XP_036850680
LinkDB
Position
Unknown
AA seq 109 aa
MDAKVIAVLAPVLAALCLSDGKPVSLSYRCPCRFFESHIARGKIKHLKXLNTPNCALQIV
ARLKNNNRQVCIDPKLKWIQEYLEKALNNQVPRPQRGGSGVPSARLPDL
NT seq 330 nt   +upstreamnt  +downstreamnt
atggatgccaaggtcatcgccgtgctggcccctgtgctggctgcgctctgtctcagcgac
gggaaaccagtcagcctgagctacagatgtccttgccgattcttcgagagccacattgcc
agaggcaagatcaagcatctcaaantcctcaacaccccaaactgtgcccttcagattgtg
gcaaggctgaagaacaacaatagacaagtgtgcattgacccgaaattgaagtggattcag
gaatacctggagaaagctttaaacaaccaggtgccgagaccccagcgaggaggctcagga
gtgccctctgctcggctgcctgacctctag

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