Manis javanica (Malayan pangolin): 108405341
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Entry
108405341 CDS
T06054
Symbol
TAP1
Name
(RefSeq) antigen peptide transporter 1
KO
K05653
ATP-binding cassette, subfamily B (MDR/TAP), member 2 [EC:
7.4.2.14
]
Organism
mjv
Manis javanica (Malayan pangolin)
Pathway
mjv02010
ABC transporters
mjv04145
Phagosome
mjv04612
Antigen processing and presentation
mjv05163
Human cytomegalovirus infection
mjv05168
Herpes simplex virus 1 infection
mjv05169
Epstein-Barr virus infection
mjv05170
Human immunodeficiency virus 1 infection
mjv05340
Primary immunodeficiency
Brite
KEGG Orthology (KO) [BR:
mjv00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
108405341 (TAP1)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
108405341 (TAP1)
09150 Organismal Systems
09151 Immune system
04612 Antigen processing and presentation
108405341 (TAP1)
09160 Human Diseases
09172 Infectious disease: viral
05170 Human immunodeficiency virus 1 infection
108405341 (TAP1)
05168 Herpes simplex virus 1 infection
108405341 (TAP1)
05163 Human cytomegalovirus infection
108405341 (TAP1)
05169 Epstein-Barr virus infection
108405341 (TAP1)
09163 Immune disease
05340 Primary immunodeficiency
108405341 (TAP1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
mjv02000
]
108405341 (TAP1)
Enzymes [BR:
mjv01000
]
7. Translocases
7.4 Catalysing the translocation of amino acids and peptides
7.4.2 Linked to the hydrolysis of a nucleoside triphosphate
7.4.2.14 ABC-type antigen peptide transporter
108405341 (TAP1)
Transporters [BR:
mjv02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB2, 3, 8, 9, 10 subgroups
108405341 (TAP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
AAA_16
SMC_N
AAA_22
ABC_ATPase
AAA_29
AAA_21
AAA_25
AAA_30
APS_kinase
Zeta_toxin
AAA_18
AAA_33
AAA_5
RsgA_GTPase
YodE
AAA_23
Motif
Other DBs
NCBI-GeneID:
108405341
NCBI-ProteinID:
XP_036861096
LinkDB
All DBs
Position
16:58267604..58274967
Genome browser
AA seq
750 aa
AA seq
DB search
MAGSGSPAPSGCLYLFRASLPWLGTTLLLLADWVLLRPALPRIFSFLVPSTLPLLRVWGV
GLSRWAVLGLGARGVPRATDGSKSGSAGVLGWLAASESLAAALGLALPVLALFRELGSWG
VPRDSHSTRLLHWGCRLDAFALSYAAVLPAAALWRKLGSLWVRGGQGKSADAVRRLLGCL
GSDIRRLPLVLGLLVLSCAGEMAIPFFTGRLTDWILQDKAASAFTRNVTLMSVLTVASAV
LEFMGDGIYNGTMGRAHSHLQGEVFRAVLQQETEFFQENQTGAITSRVTADTSSLSESLS
EKLSLLLWYLVRGLCLLGLMLWGSLSLTMVTLVALPLLFLLPKKLGKWHQVLAAQVQESL
AESSQVATEVLSAMPTVRSFANEEGEAQKFRQKLQEMNTLSQKEALAYAVSLWTTTISGM
LLKVAILYIGGHLVISGAVSSGDLVTFVLYQVQFTTAVEVLLSTYPNIQKAVGSSEKIFE
YLDRIPRCPASGVLTPLNLKGLVQFQDVSFAYPNHPEVLVLQGLTFTLRPGEVTALVGPS
GSGKSTVAALLQNLYQPTGGQLLLDGEPLPQYEHHYLHRQVAAVGQEPQLFGRSFQENIA
YGLIQKPTMEEIIAAAMESGAHSFISELPQGYNTEVGEAGSQLSGGQRQAVALARALIRK
PQVLILDDATSALDANSQLQLEQLLYESPERCSRSVLLITQHLSSVEQADHILFLEGGTI
CEAGTHQQLMENRGHYRNMVQAASGSDAPE
NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
atggccggctcagggtcccccgcgcccagcgggtgcctctacctcttccgagcttcccta
ccgtggctggggacaacgctgctgcttctagccgactgggtgctgctccggccggcgctg
ccaagaatattctcctttttagtgccttccacgctgccgttgcttcgggtctggggggtg
ggcctgagccgctgggctgtgctggggctgggggcccgcggagtccccagggcgacggat
ggctccaagagcggaagcgcaggggtcctgggctggctggctgcttcggagtccctggcg
gcggcgctgggcctggcgctgccggtacttgccttattccgagagctgggctcctgggga
gtccccagggactctcacagcaccaggctgctgcactggggatgtcgcctcgacgccttc
gccctcagctacgctgcagtgctgcccgcagctgctctatggcgcaagctcgggagcctt
tgggtacgcggaggtcaagggaaatctgcagacgcggtgcgccggcttctaggctgcctg
ggctcggacatacggcgcctgccgctcgttctgggcctgctggtcctttcctgtgccggg
gagatggccattcccttcttcactggccgcctcaccgactggattctacaagacaaggca
gcctctgccttcactcgaaatgtaactctcatgtccgttctcactgtagccagtgcagtg
ctggagttcatgggtgatgggatctacaatggcaccatgggccgtgcacatagccacttg
cagggagaggtgtttcgggctgtcctgcagcaggaaacagagtttttccaagagaaccaa
acaggcgccatcacatctcgggttacagcagacacgtcctccctgagtgagtctctaagt
gagaagctgagcctgttgctgtggtacctggtgcgtgggctgtgtctgctggggctcatg
ctctgggggtcgctctccctcaccatggtcaccctggtcgccctgcctctgcttttcctt
ctgcccaagaagcttggaaaatggcaccaggtgctggcagcacaggtgcaggaatctctg
gcagagtccagccaggtggccactgaggttctgtcagcgatgcctacagtccggagcttt
gccaatgaggagggtgaggcccagaagtttaggcagaagctgcaggaaatgaacacactc
agccagaaggaggccctggcctatgccgtcagcctgtggaccactactatctcagggatg
ctgctgaaggtggcgatcctatacatcggtgggcatctggtgataagtggggctgtaagc
agtggggaccttgtcacctttgttctctaccaggtccagttcactacagcagttgaggta
ctgctctccacctatcccaatatacagaaggctgtgggctcctcagagaaaatattcgaa
tacctggaccggatccctcgctgcccagccagtggtgtgttgactcccttaaacttgaaa
ggcctcgtccagttccaagatgtctcctttgcctacccaaaccacccagaggtcctggtg
ttgcaggggctgacgtttaccctccgtcctggggaggtgacagcactggtgggacccagt
gggtctgggaagagcacagtggctgccctgctgcagaatctgtaccagcccaccgggggg
cagctgctcctggatggggagccccttccccagtatgagcaccactacctgcacagacag
gtggctgctgtgggacaagagccacagctatttggaagaagttttcaagaaaatattgcc
tatggcctgatccagaagccaactatggaggaaatcatagctgcagcaatggagtctgga
gcccatagcttcatctctgaactccctcagggctacaacacagaggtgggtgaggctggg
agccagctgtcaggtggtcagcggcaggcagtggccttggctcgagcactgatccggaaa
cctcaggtgcttatcctggatgatgctaccagtgccttggatgcaaacagccagttacag
ttggagcagctcctgtatgaaagccctgagaggtgctctcggtctgtgcttctcatcacc
cagcatctcagctcagtggaacaggctgaccacatcctctttctagaaggaggcaccatc
tgtgaggcgggaacccaccagcagctcatggagaacaggggacactaccggaacatggtg
caggctgctagcgggtcagatgctccggaatga
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