Marinimicrobium sp. C6131: OOT55_05020
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Entry
OOT55_05020 CDS
T08615
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
mke
Marinimicrobium sp. C6131
Pathway
mke01501
beta-Lactam resistance
mke01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
mke00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
OOT55_05020
01503 Cationic antimicrobial peptide (CAMP) resistance
OOT55_05020
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mke03036
]
OOT55_05020
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
mke02000
]
OOT55_05020
01504 Antimicrobial resistance genes [BR:
mke01504
]
OOT55_05020
Chromosome and associated proteins [BR:
mke03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
OOT55_05020
Transporters [BR:
mke02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
OOT55_05020
Antimicrobial resistance genes [BR:
mke01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
OOT55_05020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BSH_RND
BSH_CzcB
Beta-barrel_RND_2
RND-MFP_C
BSH_CusB
YknX_C
Biotin_lipoyl
CzcB_C
BSH_YknX
HH_YBHG
CSD_RNase_II
BAR_2
Motif
Other DBs
NCBI-ProteinID:
UZJ45417
LinkDB
All DBs
Position
complement(1184616..1185728)
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AA seq
370 aa
AA seq
DB search
MKMIAIPRPLYSLLLLLAASWATAQEPPRVEAVRVAERPVIETVPLTGSVTAEQRSLLSP
QVAGLVSRLAVDTGDRVNAGDLLLELDPELVRIDRDQAAADLASAQAQWEDSERQLNEAR
SLRDGAIAASDIRRLEAEERVSRANRDAAQARLRRLEAELERHQVRAPFDGVVSSRQVDL
GEWVSPGNPLMELVASAPLRVHFQVPQRYFPSVSEQSSLALRFDAYPDTEVTGRVHRKVP
LSETGARTFLLRVTPPDDAPPLIPGLSTSGLLELNTERTGLSVPRDALIRYPDGRVSVWV
VTEAEQGQVSSVREQQVTPGISASGRVEIRSGLSSGDVVVTLGNEALQEGQDVLPERIVD
GAETGKGGDR
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgaagatgattgccatccctcgcccactgtacagccttttgctcctgctggccgcctcc
tgggccacggcgcaggagccccccagagtcgaggccgttcgggtggcggagaggccggtc
atcgagacggttccattgaccggctcggtcacggcggagcagcgatcgctgctttcgccc
caggtggccgggctggtgtctcgcctggcggttgataccggggaccgggtcaacgccggc
gacctcctgctggaactggatcccgagctggtccgtatagatcgggaccaggcggcggcg
gacctggccagcgcccaagcacagtgggaggacagtgaacgtcagctcaatgaagcccgg
tcgctgcgcgatggtgccatcgccgccagtgacattcggcgcctggaagccgaagagcgg
gtcagccgggccaaccgggacgccgcccaggcccggttgcgccgactggaggcggagttg
gagcgacaccaggtcagagccccgttcgacggtgtggtcagttcccgtcaggtggatctg
ggcgaatgggtgtccccggggaatccgttgatggagctggtcgccagcgccccactgcgg
gttcacttccaggtgccccagcgttattttccgagcgtcagcgagcagtccagtctggca
ctgcgttttgacgcttaccctgacactgaagtcaccggccgggttcatcgtaaagtcccc
ctcagcgagacgggtgcacggacctttctgttgcgcgtgaccccacccgacgacgccccg
ccactgattcccggtctgtccacctccggacttctggagttgaataccgagcgaaccggt
ctctcggtgccccgtgacgccctgatccgctatccggatggtcgggtcagtgtctgggtc
gtaaccgaggcggaacagggccaggtcagcagcgtccgcgagcagcaggtcacgccgggc
atcagcgcctcgggtcgggtggaaatccgctccggcctgtcgtccggtgatgtggtggtg
acgttgggcaacgaagccctgcaggaggggcaggacgttctgcccgagcgtattgtcgac
ggggcggaaaccggcaagggaggtgaccgctga
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