Mesoplasma lactucae: CP520_02610
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Entry
CP520_02610 CDS
T05127
Symbol
ligA
Name
(GenBank) DNA ligase (NAD(+)) LigA
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
mlac
Mesoplasma lactucae
Pathway
mlac03030
DNA replication
mlac03410
Base excision repair
mlac03420
Nucleotide excision repair
mlac03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mlac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CP520_02610 (ligA)
03410 Base excision repair
CP520_02610 (ligA)
03420 Nucleotide excision repair
CP520_02610 (ligA)
03430 Mismatch repair
CP520_02610 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mlac03032
]
CP520_02610 (ligA)
03400 DNA repair and recombination proteins [BR:
mlac03400
]
CP520_02610 (ligA)
Enzymes [BR:
mlac01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
CP520_02610 (ligA)
DNA replication proteins [BR:
mlac03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
CP520_02610 (ligA)
DNA repair and recombination proteins [BR:
mlac03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
CP520_02610 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CP520_02610 (ligA)
MMR (mismatch excision repair)
DNA ligase
CP520_02610 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
CP520_02610 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
BRCT
DNA_ligase_ZBD
HHH_5
Nlig-Ia
BRCT_2
Relaxase_C
5_3_exonuc
DUF7467
HHH
Motif
Other DBs
NCBI-ProteinID:
ATG97611
UniProt:
A0A291ISD4
LinkDB
All DBs
Position
complement(583302..585290)
Genome browser
AA seq
662 aa
AA seq
DB search
MDKKIVDEYNRLKDDLNRWGREYYVEDQPSVDDSEYDKSMNRLLELEQEYPELISEDSPS
QNVGGRILEGFEKYNHKKPMMSLGDIFSFEEFMKFNSQVEKVTGTFDNEYYAELKIDGLS
IALIYEDGKLVTGATRGDGKVGENVTENVKMIKTVPLTIKEKGHVEVRGEVYMPLEEFKK
INDKRLLNGEEPFANPRNAAAGTLRQLDSKIVAERKLSTFIYYYLGNDKNVDTQAKAIQH
LTDLGFNVNPDGRLCHSIDDIKDYIAEYSEQRSKLGYDIDGIVLKYNDFDMYDKIGHTAK
VPKWAIAYKFPAEVKETELLDIYGSVGRTGKITYNAKLTTVKLAGTNVSAATLNNAEFIK
ALDLRVGAMVKVKKAGDIIPEVISVIKDEKYYTLPKYVPLTNCPVCHSKLERNTGEVDQY
CINIDCPAQIKRSIEHYASRGATNIVGLGEKIVVELYDHKILNDVVGIYDLKNKQEELLQ
LDKFGQKKIDNLLTSIENSKRNSLEKTLFGLGIRHIGSKTALILAKRFKNIDNLMKTSIH
EFNSVDGIGEVLAESLYDWFRVEKNINVIEGLKSHNVNFEYIGETEIQNENFDNKTFVIT
GTLSRPRSYYEEIIEQRNGHVSSSVSKNTDYILAGEKAGSKLEKGQKLGVKILSEQEFDN
LI
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atggataaaaaaattgttgatgaatataatcgtttaaaagatgatttaaaccgttgagga
agagaatattacgtagaagatcaaccaagtgttgatgatagtgaatatgataaatcaatg
aatcgtttattagaattagaacaggaatatcctgaactaatttcagaagattctccttca
caaaatgttgggggaagaattttagaaggttttgaaaaatataatcataaaaaaccaatg
atgtctcttggcgacatcttctcttttgaagaatttatgaaatttaattctcaagttgaa
aaagttacaggaacttttgacaatgaatattatgctgaattaaaaattgatggtttatcg
attgctttaatatatgaagatggaaaacttgtaactggagccaccagaggcgatggtaaa
gttggagaaaatgtaactgaaaacgtcaaaatgattaaaacagttcctttaactattaaa
gaaaaaggtcatgttgaagttcgtggagaagtttacatgcctttagaagaatttaaaaaa
attaatgataaacgtttattaaatggtgaagagccatttgctaacccaagaaacgcagca
gcaggaactctaagacaattagattctaaaattgtggctgaaagaaaactaagtactttt
atttattattatttaggtaatgataaaaacgttgatactcaagcaaaagcaattcaacat
ttaactgatttaggatttaatgttaatcctgatggaagattatgtcactcaattgatgat
attaaagattacattgctgaatatagtgaacaaagaagcaaattgggctatgacattgat
ggaattgtcttaaaatacaatgactttgacatgtatgataagataggtcataccgctaaa
gttcctaaatgagctatagcttataaattcccagcagaagttaaagaaactgaactatta
gatatttatggttctgttggaagaactggaaaaattacttataatgctaaattaacaaca
gttaaattagctggaacaaatgttagtgctgctactttaaataatgctgaatttattaaa
gcattagatttaagagttggagcgatggtgaaagttaaaaaagctggagatattattcca
gaagttatttctgttattaaagatgaaaaatattatactttaccaaaatatgtgccattg
acaaactgtccagtttgtcattctaaactagaaagaaacactggtgaagttgatcaatat
tgtattaatattgattgtcctgctcagattaaaagaagcattgaacattatgcttcacgt
ggtgctactaacattgttggtttaggtgaaaaaatagttgttgaattatatgatcataag
attctaaatgatgttgttggtatttatgatttaaaaaacaaacaagaagaattattacaa
ttagataagtttggccaaaagaaaattgacaatctattaacatcaattgaaaattctaag
agaaactcattagaaaaaactttatttggtttagggattagacatattggttcaaaaact
gccttaatccttgctaaaagattcaaaaacattgataatttaatgaaaacaagtattcat
gaatttaatagtgttgatggaataggtgaagttttagctgaatcattgtacgattgattt
agagttgaaaaaaacattaatgtaattgaagggctaaaaagccataatgtaaacttcgaa
tatattggtgaaactgaaattcaaaacgaaaattttgataacaaaacctttgttatcaca
ggaactctttcaagacctagaagttattatgaagaaatcattgaacaaagaaatggacat
gttagttcaagtgtttctaaaaatacagactatattttagctggggaaaaagctggaagt
aagttagaaaaaggtcaaaaactaggagtaaaaatcctatcagaacaagagtttgataat
ttaatttaa
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