Macrotis lagotis (bilby): 141502040
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Entry
141502040 CDS
T11097
Symbol
C9orf72
Name
(RefSeq) guanine nucleotide exchange factor C9orf72 homolog isoform X1
KO
K23609
guanine nucleotide exchange protein C9orf72
Organism
mlao Macrotis lagotis (bilby)
Pathway
mlao04140
Autophagy - animal
mlao05014
Amyotrophic lateral sclerosis
mlao05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
mlao00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
141502040 (C9orf72)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
141502040 (C9orf72)
05022 Pathways of neurodegeneration - multiple diseases
141502040 (C9orf72)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mlao04131
]
141502040 (C9orf72)
Membrane trafficking [BR:
mlao04131
]
Autophagy
Other autophagy associated proteins
Rab associated proteins
141502040 (C9orf72)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C9orf72-like
PH_PLEKHM2
Motif
Other DBs
NCBI-GeneID:
141502040
NCBI-ProteinID:
XP_074062683
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All DBs
Position
X:104053207..104107028
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AA seq
481 aa
AA seq
DB search
MSALCLPPSPAVAKTEIALSGYSPLLAATFAYWDNILGPRVRHIWAPKTQQLLLSDGEIT
FLANHTLNGEILRNAENGAIDVKFFVLSEKGVIIVSLIFDGNWNGDRSTYGLSIILPQIE
LSFYLPLHRVCVDRLTHIIRKGRIWMHKERQENFQKIVLEGTERMEDQGQSIIPMLTGEV
ILIMELLSSMKSHSVPEEINISDTVLNDDDIGDSCHEGFLLNAISSHLQTCGCSIVVGSS
ADKVNKIVRTLCLFLTPSERKCSRLCRNESSFKYESGLFVQGLLKDSTGSFVLPFRQVMY
APYPTTHIDVDVNTVKQMPPCHEHIYNQRRYMRSELTAFWRATSEEDVAQDTIIYTDETF
TPDLNVFQDVLHRDTLVKAFLDQVFHLKPGLSLRSTFLAQFLLVLHRKALTLIKYIEDDT
QKGKKPFKSLRNLKIDLDLTAEGDLNIIMAIAEKIKPGLHSFIFGRPFYTSVQERDVLMT
F
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgtctgctctctgtctaccaccatctccagccgttgccaagactgagattgctttaagt
ggttattcacccttattagcagctacttttgcatactgggacaacattcttggccctaga
gtaaggcacatttgggctcccaagacacaacaactgcttctcagtgatggagaaataaca
tttcttgctaaccatactctaaatggagaaatccttcggaatgcagagaatggagccata
gatgtgaagttttttgtgttgtctgaaaaaggagtaattattgtttcgttaatctttgat
ggaaactggaatggggatagaagtacatatggactgtcaataatacttccacaaattgaa
ctcagtttctatcttccgcttcatagagtatgtgttgatagattaacccacatcatccgc
aaaggaaggatatggatgcataaggagagacaagagaatttccagaagattgtattagaa
ggaacagaaagaatggaagatcagggtcagagcattattccaatgctcactggagaggtt
attcttataatggaactcctttcatctatgaaatcacacagtgttcctgaggaaataaat
ataagtgatacagtactaaatgatgatgacattggggatagttgccatgaaggtttcctt
ctcaatgccatcagctcccacctacagacctgtggctgttctatagtagtaggtagcagt
gcagataaagtgaataagatagtgaggacattgtgcctttttctgactccttcagaacga
aagtgctcgagactttgtaggaatgagtcttcatttaagtatgaatctgggttatttgtg
caaggtcttctcaaggattcaactggaagttttgtgttgcccttccgacaagtcatgtat
gccccatatcctactacacacatagatgtggatgttaatacggtgaaacagatgccacca
tgtcatgaacatatctataaccagcgtcgttacatgagatcagagctgactgcattttgg
agagctacttcagaagaagatgtagctcaggatacaattatctatacagatgaaaccttc
actcctgatttgaatgtttttcaagatgtcctacacagagacacactagtaaaagccttt
ctggatcaggtctttcatttaaaacctggtttgtctctgagaagtacttttcttgcacag
tttttacttgttcttcatagaaaagccttaacactcatcaaatacatagaggatgatacg
cagaaagggaaaaagccatttaaatctctccgaaacttgaagatagatcttgatttaaca
gcagagggcgatcttaacataataatggctatagctgagaaaatcaaaccaggactacat
tccttcatctttggaagacctttctacactagtgtacaagaacgggatgtgctaatgaca
ttttaa
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