Macrotis lagotis (bilby): 141514033
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Entry
141514033 CDS
T11097
Symbol
SCN4A
Name
(RefSeq) sodium channel protein type 4 subunit alpha
KO
K04837
voltage-gated sodium channel type IV alpha
Organism
mlao Macrotis lagotis (bilby)
Brite
KEGG Orthology (KO) [BR:
mlao00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
mlao04040
]
141514033 (SCN4A)
Ion channels [BR:
mlao04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
141514033 (SCN4A)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
GPHH
IQ
FUT8_N_cat
Motif
Other DBs
NCBI-GeneID:
141514033
NCBI-ProteinID:
XP_074080575
LinkDB
All DBs
Position
2:complement(201968017..202061714)
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AA seq
1811 aa
AA seq
DB search
MANPPAPILVPPGPDCLRPFTPESLQAIEKRAIEEEARLLRNKQLEIEEPERKPRSDLEA
GKNLPFIYGDPPPEIIGIPLEDLDPYYSDKKTFIVLNKGKAIFRFSATPALYMLSPFSVI
RRGAIKVLIHSLFSLFIMITILANCVFMTMSDPPPWSKNVEYTFTGIYTFESLIKMLARG
FCIDDFTFLRDPWNWLDFSVIMMAYLTEFVDMGNISALRTFRVLRALKTITVIPGLKTIV
GALIQSVKKLSDVMILTVFCLSVFALVGLQLFMGNLRQKCVKWPPPISDINETWYDNGTA
LFSNETGFGNDTGYSNFTFDWDAYINDEGNFYFLDGANDALLCGNSSDAGHCPEGYQCMK
AGRNPNYGYTSYDTFSWAFLALFRLMTQDYWENLFQLTLRAAGKTYMVFFVVIIFLGSFY
LINLILAVVAMAYAEQNDATLAEEQEKEEEFQQMLEKLKKHQEEQEKLAQAALESGEGDG
DQIQGKDCNGGLDKEEPRRRPSQNPNRQSCSMESAVSDAMEELEGAHQKCPPWWYKCAHT
LLVWNCCTPWVKLKKIVYLIVMDPFVDLGITICIVLNTLFMAMEHYPMTPEFEHVLSVGN
LVFTGIFTAEMVLKLIAMDPYEYFQQGWNIFDSFIVTLSLVELGLANVQGLSVLRSFRLM
RVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKECVCKID
SNCSLPRWHMHDFFHSFLIVFRILCGEWIETMWDCMEVAGQPMCLTVFLMVMVIGNLVVL
NLFLALLLSSFSADSLAASDDDGEMNNLQIAIGRITWAIDYTKAFILALLHGKILAPGDM
KKEPQNAENGENGEEKKEQQQEDEEDLKKDNHILNHIDVVDCPPTSIELDHMNFINNPYL
TVQVPIASEESDLEMPTEEETDTFSEAEEIKKPLPPKCDGNSSVCSTADYKPPEEEEEPQ
EEENPEGEQPEECFTENCVKRFPFLYVDITSDRGKIWWNLRKACFKMVEHNWFETFIVFM
ILLSSGALAFEDIYIEQRKVIRAILEYADKVFSYVFVLEMLLKWVAYGFKVYFTNAWCWL
DFLIVDVSIISLVANWLGYSELGPIKSLRTLRALRPLRALSRFEGMRVVVNALLGAIPSI
MNVLLVCLIFWLIFSIMGVNLFAGKYYRCINTTTSEIFDISVVNNMSDCFKLMDTGEVRW
VNVKVNFDNVGLGYLSLLQVATFKGWMDIMYAAVDSREVEQQPQYEVNLYMYIYFVLFII
FGAFFTLNLFIGVIIDNFNQQKKKFGGKDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPQN
KIQGMVYDFVTKQMFDIAIMFLICLNMVTMMVETDDQSQLKIDILYYINMVFIIIFTGEC
VLKMLALRQYYFTVGWNIFDFVVVILSIAGLALSDLIQKYFVSPTLFRVIRLARIGRVLR
LIRGAKGIRTLLFALMMSLPALFNIGLLLFLVIFIYSIFGMSNFAYVKKESGIDDIFNFE
TFGNSMICLFQITTSAGWDGLLNPILNSGPPDCDPELENPGSSVKGDCGNPSIGICFFCS
YIIISFLIVVNMYIAIILENFSVATEESSEPLGEDDFEMFYETWEKFDPDATQFIAYSRL
SDFVDTLQEPLKIAKPNKIKLITLDLPMVPGDKIHCLDILFALTKEVLGDSGEMDALKQT
MEEKFMAANPSKVSYEPITTTLKRKHEEVCAVKIQRAYRRHLLKRSVKQASYLYRHSGDS
SGFEAPEKEGLIADAMNKMYGNNSSHKEEEKTTGEAGPALGLTPIDAPDSSQSSPEPQGK
GVRPGVKESLV
NT seq
5436 nt
NT seq
+upstream
nt +downstream
nt
atggcaaacccacctgcgcctatacttgttccccctggacccgactgcctgcgtcccttc
actcctgagtccctacaggccatagagaagcgggcaatagaggaggaggcaagactcctt
cggaacaagcaacttgagattgaagagcctgagagaaagccacgaagtgacctggaagca
gggaagaatctacccttcatttatggagaccccccacctgagatcattggcatccccttg
gaggatctggatccctactacagtgacaagaagaccttcatcgtgttgaacaaggggaag
gccattttccgattctcagccaccccagccctgtatatgctgagtcccttcagtgtgata
aggcgtggggccatcaaagttctcatccactcgttgttcagcttattcatcatgatcacc
atcctggcaaactgtgtgttcatgaccatgagtgacccccctccttggtccaaaaatgtg
gagtatacctttaccggaatctatacctttgagtcgctcatcaagatgctcgcccgaggc
ttctgcattgatgacttcacattcctccgggatccctggaactggctagacttcagtgtc
atcatgatggcgtacctgacagagtttgtggacatgggaaacatttcagccctgagaacc
tttcgtgtgcttcgagccctgaagactataacagttattccaggactgaagacaattgta
ggggcattgatccagtcggtgaagaagctctcagatgtgatgattcttacagtcttttgc
ctgagtgtctttgccttggttgggctacagctcttcatggggaatctgaggcaaaagtgt
gtgaaatggccaccccccatcagtgatatcaatgagacttggtatgacaacggaacggcc
ttattcagcaatgagacaggttttggtaatgatacaggatacagcaacttcacctttgat
tgggatgcctacatcaatgatgaagggaacttttatttcctggatggtgccaatgatgct
ctgctctgtggaaacagcagtgatgcagggcactgtcctgagggctaccagtgcatgaaa
gcaggcaggaatcccaactatggctacaccagttacgacaccttcagttgggccttcctt
gctctcttccgactcatgacgcaagattactgggagaacctcttccagctgacccttcgg
gcagctggcaagacttacatggtcttctttgtagtcatcatctttctgggttccttctat
ctcatcaatctcatcctggcagtagtagcaatggcctatgcagaacagaatgatgccacc
ctggcagaagagcaagagaaggaggaagagttccagcagatgctagagaaactcaagaag
caccaggaggaacaggaaaaattggctcaagcagccctggagagtggtgaaggagatggg
gaccagatccaggggaaggattgcaatggtggactagataaagaagagccccgaaggaga
ccatcccagaaccccaatagacaaagctgcagcatggaaagtgccgtgtctgatgccatg
gaagagttggagggggcccatcagaagtgtccaccatggtggtacaagtgtgcccataca
ttgttggtgtggaattgctgtactccgtgggtgaagctaaagaagattgtatacctgatt
gtcatggacccctttgtggacctgggcatcaccatctgcattgtactcaacacactcttt
atggccatggagcactaccccatgactcctgagtttgaacatgtgctctctgtgggcaac
ctggttttcacaggcatcttcactgcagagatggtgctgaagctgattgcaatggatccc
tacgaatacttccagcagggatggaacatcttcgacagttttattgtcaccctgagcctg
gtggagctgggactggccaatgtgcaagggctatctgtgcttcgatccttccgcttgatg
agagtcttcaaactggccaagtcctggcccacattgaatatgctcatcaagatcattggc
aattctgtgggggccttggggaacctgacactggtgttggccatcatcgtcttcatcttc
gccgtggtgggaatgcaactctttgggaagagctataaggagtgcgtgtgcaagattgat
tctaactgcagtctaccccgctggcacatgcatgacttcttccactccttcctcattgtc
ttccgaatcctatgtggcgagtggatcgagaccatgtgggattgtatggaggtagccggg
cagcccatgtgcctcactgtctttctcatggtcatggtcattgggaatcttgtggtcttg
aatctattccttgccctgctcctgagctccttcagtgctgacagcctggcagcctctgac
gatgatggggagatgaacaaccttcagattgccattggtcgtatcacctgggccattgat
tatacaaaagccttcatcctggccctcttacacggtaagatcctggctcctggggacatg
aagaaggaaccccagaatgctgagaatggggaaaatggagaagaaaagaaggagcagcag
caagaagacgaggaagatttaaagaaagacaaccacatcctaaaccacattgatgtggtg
gattgtccaccaactagtattgaacttgatcatatgaactttatcaacaacccatacttg
acagttcaggtgcccattgcttctgaggagtctgacctagagatgcccacagaagaggaa
acagacacattttctgaggctgaagagatcaagaagccactccccccaaagtgtgatggg
aactcctcagtatgcagcacagctgactacaaaccacctgaagaagaagaagagccccag
gaagaggagaaccctgaaggagagcaacctgaggagtgtttcactgagaactgtgtaaag
agattccctttcctctatgttgacatcacctcggatcgagggaaaatatggtggaacctt
cgaaaggcctgcttcaagatggtggaacacaattggtttgagacatttattgtattcatg
atccttctcagcagtggggccttggcattcgaagacatctacattgagcaaaggaaggtg
atccgggcaatcctggaatatgcggacaaggtcttctcctatgtattcgtcttggagatg
ctgctcaagtgggtggcttatggcttcaaggtgtatttcaccaatgcctggtgctggctt
gacttcctcattgtagatgtctccattatcagtctggtggccaattggttgggttactct
gaacttgggcccatcaagtcactgcggacgcttcgggcactcaggccactccgggccttg
tccagatttgaaggcatgagggtggtggtgaacgccctcctgggcgccatcccctccatc
atgaatgtgttgctcgtctgtcttatcttctggcttatcttcagcatcatgggtgtcaat
ctgtttgcgggaaagtattaccggtgcatcaataccaccacctcagaaatttttgacatc
tctgttgtcaacaacatgtcagactgcttcaaactgatggacactggggaggtccgatgg
gtcaatgtcaaggtcaacttcgacaatgtgggccttggttacctctcactcctgcaggtg
gctactttcaagggctggatggatatcatgtatgcagctgtagattcccgagaggttgaa
caacaaccccagtacgaggtgaatctttatatgtacatctactttgtactcttcatcatc
tttggcgcattcttcaccctcaatctcttcattggagtcatcattgacaacttcaatcag
caaaaaaagaagtttggaggaaaggacatcttcatgacagaggagcagaagaaatactat
aatgccatgaaaaaactgggctccaagaagccacagaaaccaattcctcgacctcagaac
aagattcagggcatggtgtatgacttcgtgaccaagcagatgtttgacatcgcgatcatg
ttcttgatctgcctcaatatggtcaccatgatggtagagacagacgaccagagtcagctc
aagattgacatcctttactatatcaacatggtcttcatcatcatcttcacgggagagtgt
gtgctcaagatgctagcgctgcgtcaatactacttcactgttggctggaacatctttgac
tttgtggtggtgatcctctccattgctggccttgccctttctgacttgatccagaaatac
tttgtttcacccacactattccgagtgattcgtctagctcggatagggcgtgtactgagg
ctgatccggggtgccaagggtatccgaaccttgctctttgccctcatgatgtctctgcct
gccctctttaacattggtctgctcctcttcctcgtcatattcatctattccatctttggc
atgtccaacttcgcttatgtgaagaaagagtctggcattgatgacattttcaactttgag
acctttggcaacagcatgatttgccttttccagatcaccacctcagctggctgggatgga
cttctgaaccccatccttaacagtggaccccctgactgtgatcctgagctggagaaccca
ggcagcagtgtcaagggtgattgtggtaacccttccataggcatttgcttcttctgcagc
tacatcatcatctccttcctcatagttgtcaatatgtacattgccatcattctggagaat
ttcagtgtggccactgaggagagcagtgaaccattgggggaggatgactttgagatgttc
tatgagacttgggagaagtttgacccagatgccacacaattcattgcctacagtcgcctc
tctgactttgtggacaccttacaagagccactgaagattgccaaacccaacaagatcaaa
ctcatcactctggatctgcctatggtccctggagacaagattcactgtctagacatcctc
tttgctctgactaaagaggttctaggagactccggtgagatggatgcccttaagcagacc
atggaggaaaaattcatggcagccaacccatccaaggtctcctatgaacccatcaccact
acactgaagaggaagcatgaggaagtatgtgctgtgaagatccagagagcctaccgccgg
catcttctcaagcgttcagtgaagcaggcctcttatctctaccggcacagtggagacagt
agtgggtttgaggccccagagaaagaaggcctgattgccgatgcaatgaacaagatgtat
gggaataacagctcccataaggaagaggaaaaaacaacaggggaggctggccctgccctg
ggtctcacacccattgatgccccagactcaagccagtcatccccagaaccacaggggaaa
ggagtacgtccaggggtcaaggagtcacttgtctaa
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integrated database retrieval system
