Macrotis lagotis (bilby): 141519072
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Entry
141519072 CDS
T11097
Symbol
TRPC3
Name
(RefSeq) short transient receptor potential channel 3
KO
K04966
transient receptor potential cation channel subfamily C member 3
Organism
mlao Macrotis lagotis (bilby)
Pathway
mlao04360
Axon guidance
mlao05017
Spinocerebellar ataxia
mlao05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
mlao00001
]
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
141519072 (TRPC3)
09160 Human Diseases
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
141519072 (TRPC3)
05022 Pathways of neurodegeneration - multiple diseases
141519072 (TRPC3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
mlao04040
]
141519072 (TRPC3)
Ion channels [BR:
mlao04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
141519072 (TRPC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRP_2
Ion_trans
PKD_channel
Ank_2
Ank
Ank_4
PBC
MFS_4
Motif
Other DBs
NCBI-GeneID:
141519072
NCBI-ProteinID:
XP_074087637
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All DBs
Position
3:complement(25041995..25133885)
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AA seq
930 aa
AA seq
DB search
MSSKGGKWREPPRATVTFPAPEDEQSPRPPPDGRWGWRGVNGGLGPPPPAGSRESLSEPP
LGSSLSAERSPAAAAAGQRAGPREKARRPAVRGPAFMFNARGPSLTAEEERFLAAAEYGN
IPVVRKMLEESATLNVNCVDYMGQNALQLAVGNEHLEVTELLLRKEHLGRIGDALLLAIS
KGYVRIVEALLGHPGFAAGRRLTLGPAPRGRPEDAGGVGSGPDEDDDDFYAYDEDGTRFS
ADITPVILAAHCHKYEVVHMLLSKGARIARPHDYFCKCPDCAERQRRDSFSHSRSRINAY
RGLASPAYLSLASEDPVLTALELSNELAKLANIEKEFKNDYRKLSMQCKDFVVGVLDLCR
DSEEVEAILNGDVDSVEPVAGQRHRASLSRVKLAIKYEVKKFVAHPNCQQQLLTIWYENL
SGLREQAIAIKCLVVLVVALGLPFLAIGYWIAPCSRLGKVLRSPFMKFVAHAASFIIFLC
LLVFNASDRFEGITTLPNITVIDYPKQIFRVKTTQFTWTEMLIMVWVLGMMWSECKELWL
EGPREYILQLWNVLDFGMLSIFIAAFTARFLAFVQATKAQQYVDSYIEGSDLSEVTLPPE
IQYFTYARDKWLPSDPQIISEGLYAIAVVLSFSRIAYILPANESFGPLQISLGRTVKDIF
KFMVLFIMVFLAFMIGMFILYSYYLGAKVNSAFTTVEESFKTLFWSIFGLSEVTSVVLKY
DHKFIENIGYVLYGIYNVTMVVVLLNMLIAMINSSYQEIEDDSDVEWKFARSKLWLSYFD
DGKTLPPPFSLVPSPKSFIYLIMRIVNFSKCRRRRLQKDIEMGMGNSKSRLNLFTQSNSR
VFESHSFNSILNQPTRYQQIMKRLIKRYVLKAQVDKENDEVNEGELKEIKQDISSLRYEL
LEDKSQATEELAVLIHKLTEKLNPSMMRCE
NT seq
2793 nt
NT seq
+upstream
nt +downstream
nt
atgtccagcaagggcgggaagtggagggagccgccgagggccaccgtgaccttcccggct
ccggaggacgagcagtcgccgcggccgccgcctgatggccgctggggctggaggggcgtc
aatggggggctggggccgccgcccccggccggctcccgggagagcctctctgagcccccg
ctgggcagcagcctgtcggcggagcggagccccgcggcggcggcggcgggccagcgcgcg
ggcccccgggagaaggcgcggcggccggcggtgcgcgggccggccttcatgttcaacgcg
cgcgggccgagcctgacggccgaggaggagcgcttcctggcggcggccgagtacggcaac
atcccggtggtgcgcaagatgctggaggagtcggccacgctgaacgtgaactgcgtggac
tacatggggcagaacgcgctgcagctggccgtgggcaacgagcacctggaggtgacggag
ctgctgctgcgcaaggagcacctgggccgcatcggcgacgcgctgctgctggccatcagc
aagggctacgtgcgcatcgtggaggcgctgctgggccacccgggcttcgcggccggccgc
cgcctgacgctgggccccgcgccgcgcggccggcccgaggacgcgggcggcgtcggcagc
gggccggacgaggacgacgacgacttctacgcctacgacgaggacggcacgcgcttctcg
gccgacatcacgcccgtcatcctggcggcgcactgccacaagtacgaggtggtgcacatg
ctgctgagcaagggcgcccgcatcgcgcggccccacgactacttctgcaagtgccccgac
tgcgccgagcgccagcgccgggactccttcagccactcgcgctcgcgcatcaacgcctac
cgcggcctggccagccccgcctacctgtcgctggccagcgaggacccggtgctcacggcg
ctcgagctcagcaacgagctggccaagctggccaacatcgagaaggagttcaagaacgac
taccggaagctttccatgcagtgcaaagactttgtggtgggtgtgctggacctttgccga
gactcggaagaggtggaggccatcctcaatggagatgtggattcggtagagccagttgct
gggcagcgccatagagcgtccctgagtcgtgtaaagctagccatcaagtatgaagtaaaa
aagtttgtggctcatcccaactgtcagcagcagcttttgaccatctggtacgagaacctc
tcaggattacgagaacaggccattgctatcaagtgtttggtggtgttggtggtggccttg
ggcctgcccttcctggccattggctactggatcgccccatgtagcaggcttggaaaagtc
ctccgaagcccattcatgaaatttgtggcccatgctgcgtccttcatcattttcctatgc
ctgctggtatttaacgcctcagacagattcgagggcataacgacactccctaacatcacc
gtcatcgactacccaaagcaaatcttcagagtgaaaacaacccagttcacctggactgag
atgttaatcatggtctgggtcctagggatgatgtggtcagaatgtaaggaactctggctc
gaagggccgagggaatacattttacagctgtggaatgttctggacttcgggatgctttcc
atcttcatcgcagctttcacagcccgattcctagcctttgttcaggccaccaaagcacag
cagtatgtggacagttatattgaagggagtgacctcagtgaagtcactctgcctccagaa
atacagtatttcacttatgctagagataaatggctcccctctgatcctcagatcatatct
gagggcctctacgccatcgccgtcgtgctcagcttctcccgcatagcctacatcctgcca
gctaatgaaagcttcggccccttgcagatttctctgggcaggacggtgaaggacatcttc
aagttcatggtcctattcattatggtgttcctagccttcatgattgggatgttcatcctg
tattcctactacctgggggccaaggtcaactctgctttcaccacagtggaggagagcttc
aagactttgttttggtccatatttggattatcagaagtgacctccgtggtgctcaaatat
gatcataaattcatcgaaaatattggctatgtgctctatggaatatacaatgtcaccatg
gttgtggtccttttgaacatgctgattgcaatgattaatagctcttaccaggaaattgag
gatgacagtgatgttgaatggaagtttgctcgctcaaaactttggttatcttactttgat
gatgggaagacgctacctccaccattcagtctggtgcccagtcccaaatcctttatttat
ctcatcatgcggattgttaatttttccaagtgcaggaggagaagactgcaaaaggatata
gaaatggggatgggtaactccaagtccaggttaaacctcttcactcagtctaactccaga
gtttttgaatcacacagttttaacagcattctcaatcagccaacacgctatcagcaaata
atgaaaaggctcataaagcgttatgttctgaaagcccaggtggacaaggagaatgatgaa
gtcaatgaaggtgagctgaaagaaataaaacaagacatttcaagcctacgctatgaactc
ttggaagacaagtcccaagcaacagaggagttagcagttctgatccataaactcacagag
aagctaaatcccagcatgatgagatgtgaatga
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