Myotis lucifugus (little brown bat): 102439039
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Entry
102439039 CDS
T07795
Symbol
DDX58
Name
(RefSeq) probable ATP-dependent RNA helicase DDX58 isoform X1
KO
K12646
ATP-dependent RNA helicase DDX58 [EC:
5.6.2.6
]
Organism
mlf
Myotis lucifugus (little brown bat)
Pathway
mlf04064
NF-kappa B signaling pathway
mlf04622
RIG-I-like receptor signaling pathway
mlf04623
Cytosolic DNA-sensing pathway
mlf05160
Hepatitis C
mlf05161
Hepatitis B
mlf05162
Measles
mlf05164
Influenza A
mlf05168
Herpes simplex virus 1 infection
mlf05169
Epstein-Barr virus infection
mlf05171
Coronavirus disease - COVID-19
Brite
KEGG Orthology (KO) [BR:
mlf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04064 NF-kappa B signaling pathway
102439039 (DDX58)
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
102439039 (DDX58)
04623 Cytosolic DNA-sensing pathway
102439039 (DDX58)
09160 Human Diseases
09172 Infectious disease: viral
05161 Hepatitis B
102439039 (DDX58)
05160 Hepatitis C
102439039 (DDX58)
05171 Coronavirus disease - COVID-19
102439039 (DDX58)
05164 Influenza A
102439039 (DDX58)
05162 Measles
102439039 (DDX58)
05168 Herpes simplex virus 1 infection
102439039 (DDX58)
05169 Epstein-Barr virus infection
102439039 (DDX58)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
mlf04054
]
102439039 (DDX58)
Enzymes [BR:
mlf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
102439039 (DDX58)
Pattern recognition receptors [BR:
mlf04054
]
Cytoplasmic pattern recognition receptors
RIG-I-like receptors
102439039 (DDX58)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CARD_2
RIG-I_C
RIG-I_C-RD
DEAD
ResIII
Helicase_C
At4g08330
CCDC85
AAA_25
AAA_19
PhoH
DUF2672
Motif
Other DBs
NCBI-GeneID:
102439039
NCBI-ProteinID:
XP_014319864
Ensembl:
ENSMLUG00000003041
LinkDB
All DBs
Position
Unknown
AA seq
928 aa
AA seq
DB search
MTAEERRNLHAFRDYVTKILDPTYILSYMSPWFKEDEVQYIQAEKNNKGVMEAATLFLKF
LLELQEEGWFRGFLDALHHAGYSGLYEAIESWDFHKIEKLEEHRSLLRRLQPEFKTRINP
NDILPEVSECLINQECEEIRQVCSNKGPMAGAEKMVECLLRSDKENWPKYLKLALEKEES
NFSELWIIEKGAKEETKELEDGEIETSDVQIFYKEEPECQNLSQNSCPPSEASCTQSPIK
PRNYQLELARPALEGKNTIICAPTGCGKTFVALLICEHHLQKFPQGQKGKIVFFANQLPV
YEQQKSVFLKYFERHGYKIAGVSGATVENISVDQIVENNDIIILTPQILVNSLKNGTIPS
LSVFTLMIFDECHNTSKLHPYNVIMFHYLDQKLGGSSDPLPQVIGLTASVGVGDAKNTTE
ATEYICKLCASLDTSVVATVKDNLEELEEIVYKPQKFFRKVKSRTTNRFKCIISELMKET
ESLAKSIFGELGTISLENLSQIQNRNYGTQKYEQWIVAVQKKCAVLHLPDKDKESRICTA
LFLYTSHLRKFNDALLINEHARTKDALDYLKDFFSNVRSAGFDEIEQDLTRRFEEKLQEL
ESISMDPSNENPKLKDLCFILQEEYHLNPETRTILFVKTRALVDALKKWIEENSILSFLK
PDILTGRGKTSQNIGMTLPAQKCVLDAFRASGDKKILIATSVADEGIDIAQCNLVILYEY
VGNVIKMIQTRGRGRARGSKCFLLTSNDDVIEKEKINIYKEKMMNDSILSLQAWDETVFK
KKIHQIQIHEKFIRDSQGKAEPALDKKNKKLLCRKCKAFACHTADIRVIEECHYTVVGDA
FKECFVTKAHPRPKSVGIFEKKAKVFCARQNCSHDWGIHVKYKTFEIPIIKIESFVVEDI
ATGEQRLYAKWRDFHFEKLPFDPAEMSK
NT seq
2787 nt
NT seq
+upstream
nt +downstream
nt
atgacggccgaggagcggcggaatctgcacgccttccgggactatgtcaccaagatcctg
gaccctacctacatcctgagctacatgtccccctggtttaaggaggatgaggtgcagtat
attcaagctgagaaaaacaacaagggtgtgatggaggctgctacactttttctcaagttc
ctattggagctccaggaggaaggctggtttcgtggctttttggatgctcttcaccatgca
ggttattctggactttatgaagccattgaaagttgggatttccacaaaatagaaaagttg
gaggaacatagatcgcttttaaggcgtttgcaaccagaatttaaaaccagaattaatcca
aatgatatccttcctgaagtatctgaatgtttaattaatcaggaatgtgaagaaattaga
caggtttgttccaacaaggggccgatggcaggtgcagagaaaatggttgagtgccttctc
agatcagacaaggagaactggcccaaatatttgaaacttgctttggagaaagaagagagc
aatttcagtgaactgtggattatagagaaaggtgcaaaagaggaaacgaaagagcttgag
gatggggaaatagaaacttccgacgtacagattttctacaaggaagaaccagaatgccag
aatcttagtcagaattcatgtccaccttcagaagcatcttgtactcagagcccaattaag
ccaagaaattaccaactagagcttgctcgtcctgctttagaaggaaaaaacacaataata
tgtgctcctactggttgtgggaaaacctttgttgcacttctcatatgtgaacatcatctt
cagaaatttccgcaaggacaaaaggggaagattgtgttttttgctaatcaactcccagtg
tatgaacagcagaaatccgtcttcttaaaatattttgaaagacatgggtacaaaattgca
ggcgtttctggagccacagttgagaatatctcagtggatcagattgttgagaacaatgac
atcatcattttaactccacagattcttgtgaacagccttaaaaatgggactattccatca
ctctctgtctttactttgatgatatttgatgaatgccacaacaccagcaaactccatcct
tacaatgtgatcatgtttcattatctagatcagaaacttggaggatcttcagacccactg
ccccaggtcattgggctgactgcctcagttggcgttggggatgccaaaaacacaacggaa
gccacggagtatatctgcaagctgtgcgcttctcttgacacatcagtggtggcaacagtc
aaagacaacttggaggaactggaggagattgtttataagccccagaagtttttcaggaaa
gtgaaatcacggaccaccaacagatttaaatgcatcatctctgagctgatgaaggagaca
gagagtctggcaaagagcatctttggtgaactcggtaccataagtctcgaaaacttatct
cagattcaaaacaggaattatggaacacagaaatatgaacagtggatcgttgcagttcag
aaaaagtgtgcagtgctgcacctgccagacaaagacaaggagagcaggatttgtacagcg
ctgtttttgtacacttcacatctgcggaaatttaatgatgccctccttatcaatgagcat
gcacggacgaaagatgctctggattacttgaaagacttcttcagcaatgtccgctcagca
ggatttgatgagatagagcaagatctcactcgcagatttgaagaaaagttgcaagaacta
gagagcatttctatggatcccagcaatgagaaccctaaactgaaggacctctgcttcatc
ttgcaagaggagtaccacttaaacccagagaccagaaccattctctttgtgaaaaccaga
gcacttgtggatgctttaaagaaatggattgaggaaaattctatactcagctttctaaaa
cctgacattctgactggacgtggcaaaacaagtcagaacataggaatgaccctcccagca
cagaagtgtgtactggatgcattccgagccagtggcgataagaagattctgatcgccacc
tccgttgctgatgaaggcatcgacattgcacagtgcaatctggtcatcctatacgagtac
gtgggcaatgtcatcaaaatgatccaaaccagaggcagaggaagagcaagaggtagcaaa
tgcttccttctgactagtaatgatgatgtaattgaaaaagaaaaaataaacatatacaaa
gaaaaaatgatgaatgactccattctaagcctccaggcatgggatgaaacagtatttaaa
aaaaagattcaccagatccagattcatgaaaaattcatcagggatagtcaaggaaaagca
gaacctgcacttgataagaaaaataaaaaactgctctgcagaaagtgcaaagcctttgct
tgtcatacagcagatataagagtgatagaggaatgccattacactgtggttggagatgct
ttcaaggagtgcttcgtgactaaggcacaccccagaccaaagagtgtggggatttttgag
aagaaagcaaaggtattctgtgccagacagaactgcagccatgactggggcatccatgtg
aagtataagacatttgagatcccaatcataaaaattgaaagttttgtggtggaggatatt
gcaactggagagcagagactgtatgcaaagtggagggactttcattttgagaagctacca
tttgatcctgcagaaatgtccaaatga
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integrated database retrieval system
