Mariniflexile litorale: QLS71_019160
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Entry
QLS71_019160 CDS
T10312
Symbol
ligA
Name
(GenBank) NAD-dependent DNA ligase LigA
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
mlil Mariniflexile litorale
Pathway
mlil03030
DNA replication
mlil03410
Base excision repair
mlil03420
Nucleotide excision repair
mlil03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mlil00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
QLS71_019160 (ligA)
03410 Base excision repair
QLS71_019160 (ligA)
03420 Nucleotide excision repair
QLS71_019160 (ligA)
03430 Mismatch repair
QLS71_019160 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mlil03032
]
QLS71_019160 (ligA)
03400 DNA repair and recombination proteins [BR:
mlil03400
]
QLS71_019160 (ligA)
Enzymes [BR:
mlil01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
QLS71_019160 (ligA)
DNA replication proteins [BR:
mlil03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
QLS71_019160 (ligA)
DNA repair and recombination proteins [BR:
mlil03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
QLS71_019160 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
QLS71_019160 (ligA)
MMR (mismatch excision repair)
DNA ligase
QLS71_019160 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
QLS71_019160 (ligA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_aden
OB_DNA_ligase
HHH_2
Nlig-Ia
BRCT
HHH_5
DNA_ligase_ZBD
PTCB-BRCT
BRCT_2
HHH
Zn_Ribbon_TF
Motif
Other DBs
NCBI-ProteinID:
XBL14414
UniProt:
A0AAU7EG43
LinkDB
All DBs
Position
complement(4514572..4516566)
Genome browser
AA seq
664 aa
AA seq
DB search
MNIEQQIQSLRDELNQHNYNYYVLDNATISDFDFDIKLKELQELEAKHPEFFDANSPTQR
VGGEVTKNFETIPHEYRMYSLENSYSKEDLLDWETRIKKLIDGDIQYTCELKYDGASISL
TYENGVLVKAVTRGDGFQGDNVTPNIKTIKSVPLKLKGDYPEKFDIRGEIVLPFEGFIKM
NEERIEIGEEPYRNPRNTASGSLKLQDSAEVAKRPLECLLYNLTGSNLGVNSQFDSLEKA
REWGFKVPHAAKLTNSIDEVLEFIDYWNIHRHELPYETDGVVVKVNNLQQQEELGYTAKA
PRWAMAYKFKAERVSTKLNSITYQVGRTGAITPVANLEPVELAGTTVKRASLHNADQIEK
LDIRVNDEVYVEKGGEIIPKILGVDLTKRPLNSKPTEYITQCPECETELVRQEGEAQHYC
PNYNGCNPQIIGRIQHFISRKAMDIEGLGGETVALLVNEGLISNYADLYELTKEQVIPLE
RMAEKSADNLIQGIEQSKSIPFERVLYALGIRYVGETVAKKLAKHYKSIAAIAEASEEAL
VNVDEIGVKIAESVRAFFSSEENILIINRLKAFGVQLEISAEQLIGQTDILKGQSIVISG
VFESVSRDELKKLIEDNGGKVSSSISSKTSYIVAGDNMGPSKRKKAEDLKIVVIDEYEFL
QKIK
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atgaatatagaacagcaaatacaaagcttacgcgacgaattaaatcagcacaactacaac
tattacgtacttgataatgcgacgatttcagattttgattttgacattaaattgaaagaa
cttcaagaattagaagcgaagcatccggaattttttgatgcgaattcgccaacacaacgt
gtaggaggggaggttactaaaaattttgaaaccataccacatgagtatcgtatgtattct
ttggagaattcctattctaaagaagatttgttagattgggaaacacgtataaaaaaactc
attgacggtgatattcaatatacttgtgagctaaaatatgatggtgcatctattagttta
acttatgaaaacggcgttttggttaaggctgttacaagaggtgatggatttcaaggcgat
aatgtaacgcccaatataaaaactattaagtcggtaccattaaaattaaagggcgattac
ccagaaaagtttgatatacgcggtgaaattgttttgccttttgaaggcttcattaaaatg
aatgaagaacgtattgaaattggcgaagagccttaccgaaatccaagaaatacagcgtct
ggaagcttgaagctacaagatagtgcagaggttgcaaaacgaccattagaatgtttgctt
tataatttaacaggttctaacttaggcgttaattcgcagtttgatagtttagaaaaagca
agagaatggggttttaaagtacctcatgcagcaaaactcactaattctattgacgaggtt
ttagagtttattgattattggaatatacaccgccatgaattgccgtatgaaactgatggt
gttgtggtaaaggtaaacaacttacaacagcaagaagagttgggatatacagccaaagca
cctcgttgggctatggcgtataagtttaaggcagaacgggtttcaacaaaactaaatagt
atcacttatcaagtgggacgcacaggtgcaattacaccagttgccaatttagaacctgtt
gaacttgcgggtactaccgtaaaaagagcctcattgcataatgctgaccaaattgaaaaa
ttagatattcgagtaaatgatgaagtgtatgttgaaaaaggcggagaaataattcccaaa
attttgggtgttgatttaaccaagcgtccattaaattctaaaccaactgaatatattaca
cagtgtcccgaatgtgaaacagaattagtaagacaagaaggtgaggcacaacattattgt
cctaattataatggttgtaaccctcaaataattgggcgtattcagcattttatatccaga
aaagcaatggatatagaaggtttgggaggagaaactgtagcgcttttggttaatgaagga
ttgatttctaattatgcagatttgtatgaattaactaaagaacaagtgattccattagag
cgcatggctgaaaaaagtgccgataatttaattcaagggattgaacaatctaaaagtatt
ccttttgaacgcgttttatatgctttaggaattcgttatgttggagaaactgtagctaaa
aaattagccaaacactataaaagtattgcagctattgcagaagcatcagaagaagcatta
gtaaatgtagatgaaattggggttaaaatagctgaaagcgttcgtgctttcttttcttca
gaagaaaatatacttataattaataggttgaaagcatttggtgttcaattggaaatttca
gcagaacaacttataggacaaaccgatatattaaaaggacagagtattgttatttcgggt
gtttttgaatctgtttcgcgcgacgagcttaaaaagcttatagaagataacggtggtaaa
gtaagcagctccatttcgtcaaaaacaagttatattgttgcgggcgataatatgggaccc
agtaaaagaaaaaaagcagaagatttgaagattgttgtaatagacgaatacgaattccta
caaaaaattaaataa
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