Massilia litorea: LPB04_00535
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Entry
LPB04_00535 CDS
T09729
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
mlir
Massilia litorea
Pathway
mlir03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mlir00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LPB04_00535 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mlir03400
]
LPB04_00535 (nth)
Enzymes [BR:
mlir01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
LPB04_00535 (nth)
DNA repair and recombination proteins [BR:
mlir03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
LPB04_00535 (nth)
Prokaryotic type
LPB04_00535 (nth)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
Ogg-HhH
Motif
Other DBs
NCBI-ProteinID:
QOL49858
UniProt:
A0A7L9U4C1
LinkDB
All DBs
Position
135194..135883
Genome browser
AA seq
229 aa
AA seq
DB search
MNPAKRFEIFSRFRAANPHPTTELEYTTPFELLIAVLLSAQSTDVGVNKATRRLWPVANT
PQKILDLGLDELKTYISTIGLYNTKARNVIATCQILVDQYGGEVPRAREALEALPGVGRK
TANVVLNTAFGEPTMAVDTHIFRVSNRTKIAPGKNVDQVEMKLLKFVPKEFLQDAHHWLI
LHGRYTCVARRPKCWNCIINDLCEFRDKTPAPDGLVAPDAVPPVALPAA
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
atgaatccagccaaacgcttcgagattttttcgcgctttcgcgccgccaatccgcatccg
accaccgaactggaatacacgacgccgttcgaactgctgatcgccgtgctgctgtcggcg
cagtcgaccgacgtcggcgtgaacaaggccacgcgccgcctgtggccggtggcgaacaca
ccgcaaaaaatcctcgatctcggtctcgacgagctgaaaacctatatctcgaccatcggc
ctgtacaacaccaaggccaggaacgtgatcgcgacctgccagatcctggtggaccagtac
ggcggcgaagtgccgcgcgcgcgcgaagcgctggaagccctgccgggcgtgggtcgcaag
acggcgaacgtggtcctgaacacggctttcggcgagccgacgatggcggtcgacacccat
atcttccgcgtctcgaaccgcacgaaaatcgcaccgggcaagaacgtcgaccaggtcgag
atgaaactgctgaaattcgtgccgaaggaattcctgcaggacgcgcaccactggctgatc
ctgcacgggcgctatacctgtgtcgcgcgccggccgaagtgctggaactgcatcatcaac
gatctatgcgaattccgcgacaagacgccggcgccggatggcctggttgcgccggatgct
gtgccgccagttgcgctgcccgctgcctga
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