Massilia litorea: LPB04_11355
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Entry
LPB04_11355 CDS
T09729
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
mlir
Massilia litorea
Pathway
mlir01501
beta-Lactam resistance
mlir01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
mlir00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
LPB04_11355
01503 Cationic antimicrobial peptide (CAMP) resistance
LPB04_11355
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
mlir02000
]
LPB04_11355
01504 Antimicrobial resistance genes [BR:
mlir01504
]
LPB04_11355
Transporters [BR:
mlir02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
LPB04_11355
Antimicrobial resistance genes [BR:
mlir01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
LPB04_11355
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
SecD_SecF_C
Pertus-S4-tox
Motif
Other DBs
NCBI-ProteinID:
QOL51788
UniProt:
A0A7L9U9X0
LinkDB
All DBs
Position
complement(2544742..2547900)
Genome browser
AA seq
1052 aa
AA seq
DB search
MARFFIDRPIFAWVIALFIMVVGAVSITQLPIAQYPNVAPPSIVINAAYPGASAQTLEDS
VISVIEREMNGSPGLVYMESSSTANGSGSITLTFETGTNPELAQVDVQNRLSRAAPRLPA
AVNQQGVRVDKVRANFLLFTILSSDDPKWDPVALGDYASRTVLPEIQRIKGVGTAQLFGT
ERAMRIWVDPAKLVGFRLSPADVNNAIRSQNAQVASGTIGDLPLARGQEITATVVVTGQL
STVEQFGNIVLRANPDGSTVRLRDVARIELGAQAYSPSARLNGKPSTGIGVQLAPSGNAL
ETARLVRQRVDELSKFFPKGMKATVPFDSSKFIDISIEQVVHTLVEALVLVFLVMYLFLQ
NFRYTIIPTIVVPVALLGSLGTLLALGYSINVLTMFGMVLVIGIVVDDAIVVVENVERIM
SEEGLPPLQATRKAMGQISGAIIGVTVVLMSVFVPLAFFAGAVGNIYRQFSVVMVSSIAF
SAFLALSLTPALCAHLLKPVEAGHHHEKKGFFGWFNRRFARTAKGYEGWVGKLIRGSGRA
LVAFVLVIGLVTLLFTRLPNSFLPNEDQGYVIANIQLPPGATVERTNEVMRTAEAFIMKQ
PEVANMVSVLGFSFSGSGQNMALAFIPLKDWSERKGEGSSAQAVAGRIIGGLSGVRDAFI
FALSPPPIPELGRGTGFSFRLQDRGGNGHNALLAARNQLLGMASQSKILTGVRPEGLEDA
PQLMLDIDRDKAQALGVTFDAINTAISTSLGSSYVNDFPNAGRLQRVVVQADAKDRMQPD
DLLRLNAMNVQGNPVPLSSFASTKWVTGPMQTLRYNGYPAMSISGDAKPGYSTGDALAEM
EALAAKLPPGFAFEWTGQSREEQLSGGTMGILMAFSLLAIFLALAALYESWSIPVAVLLV
VPFGILGAVLAAMLRSYPNDVYFKIGLVTIIGLAAKNAVLIIEFAKDLQAQGRSPMEAAI
EAAHLRFRPIIMTSLAFILGVLPLVIAGGAGSASQRAIGTGVMGGMMTASTLGVLFVPMF
FVVVRKIFKGSERQRKKYAHEEDTSKVIEEKI
NT seq
3159 nt
NT seq
+upstream
nt +downstream
nt
atggcacgtttctttattgaccgccctattttcgcctgggtgatcgcgctgtttatcatg
gtggtcggcgcggtctcgatcacccagctgccgatcgcccagtatccgaacgtggccccg
ccatcgatcgtgatcaatgccgcctatccgggcgcgtcggcacagaccctggaagactcg
gtcatctccgtcatcgaacgcgagatgaacggctcgcccggcctcgtctacatggagtcg
agcagcaccgccaacggcagcggctcgatcaccctgacttttgaaaccggcaccaatccg
gaactggcccaggtggacgtccagaaccgcctgtcgcgcgcggcgccacgcctgccggcg
gcggtgaaccagcagggcgtgcgcgtcgacaaggtgcgcgcgaacttcctgctgtttacc
atcctctcctcggacgatccgaagtgggacccggtcgcgctgggcgactacgcgtcgcgc
accgtgctgcctgaaatccagcgcatcaagggcgtcggtaccgcgcagctgttcggtacc
gagcgcgccatgcgcatctgggtcgatccggccaagctggtgggcttccgcctgtcgccg
gccgacgtcaacaacgcgatccgcagccagaacgcccaggtggcctccggtaccatcggc
gacctgccgctggcgcgaggccaggaaatcaccgcgaccgtggtcgtgaccggccagctc
tcgaccgtcgaacagttcggcaacatcgtgctgcgcgcgaatccggacggctcgaccgtg
cgcctgcgcgacgtggcccgcatcgagctcggcgcccaggcctacagcccatcggcacgc
ctgaacggcaagccctccaccggcatcggcgtgcagctggcgccgtcgggcaatgcgctg
gaaacggcacgcctggtacgccagcgcgtggacgaactgtcgaaattcttcccgaagggg
atgaaggccaccgtgccgttcgacagctcgaaattcatcgacatctcgatcgagcaggtg
gtgcacaccctggttgaagcgctggtgctggtgttcctggtgatgtatctcttcctgcag
aacttccgctatacgatcatcccgaccatcgtggttccggtggctcttctgggttcgctc
ggcacattattggcgctgggctattcgatcaacgtgctgaccatgttcggcatggtgctc
gtgattggtatcgtcgtcgacgatgcgatcgtggtcgtcgagaacgtcgagcgcatcatg
tccgaagaaggcctgccgccgctgcaggcgacccgcaaggccatgggccagatctcgggc
gccatcatcggcgtgaccgtggtcctgatgtcggtgttcgtgccgctggccttcttcgcc
ggcgcggtcggtaacatctaccgccagttctcggtcgtcatggtgtcctcgatcgccttc
tcggccttcctggcgctgtcgctgacgccggccctgtgcgcgcacctgctcaaacccgtc
gaagccggccaccaccacgagaagaagggtttcttcggctggttcaaccgccgcttcgcg
cgtaccgccaagggctatgagggctgggtcggcaagctgatccgcggctcgggccgcgcg
ctggtcgccttcgtgctggtgatcggcctggtgacgctgctgttcacgcgcctgccgaac
tccttcctgccgaacgaagaccagggctatgtgatcgccaacatccagctgccgccgggt
gcgacggtcgagcgtaccaacgaagtgatgcggaccgccgaagccttcatcatgaagcag
ccggaagtggcgaacatggtcagcgtgctgggcttctcgttctcgggctccggccagaac
atggcgctggccttcattccgctcaaggactggagcgagcgtaaaggcgaaggctcgagc
gcgcaggcagttgccggccgcatcatcggcggcctgtcgggcgttcgcgacgcattcatc
ttcgcattgagcccgccgccgatcccggaactgggccgcggcacgggcttcagcttccgc
ctgcaggaccgcggcggcaacggccacaacgccctgctggcagcccgtaaccagctgctc
ggcatggcatcgcaaagcaagatcctgaccggcgtgcgtccggaaggcctggaagacgcg
ccgcagctgatgctcgacatcgaccgcgacaaggcccaggcgctgggcgtgaccttcgac
gcgatcaacaccgcgatctcgacctcgctcggttcgagctatgtgaacgacttcccgaac
gccggccgcctgcagcgcgtggtggtgcaggccgatgcgaaggaccgcatgcagccggac
gacctgctgcgcctgaacgccatgaacgtgcagggcaacccggtgccgctgtcctcgttc
gcgtcgaccaagtgggtgaccggcccgatgcagaccctgcgctacaacggctatccggcg
atgagcatctcgggcgacgccaagccgggctattcgaccggcgacgcgctggccgagatg
gaagccctggcagccaagctgccgcccggcttcgccttcgagtggaccggccagtcgcgc
gaggaacagctctccggcggcacgatgggcatcctgatggccttctcgctgctggcgatc
ttcctggccctggcggccctgtatgaaagctggtcgatcccggtggcggtactgctggtc
gtcccgtttggtatcctcggcgcggtgctggcggcgatgctgcgcagctatccgaacgac
gtgtacttcaagatcggcctggtgaccatcatcggcctggcggcgaagaacgcggtgctg
atcatcgagttcgcgaaagacctgcaggcgcagggacgctcgccgatggaagcggcgatc
gaggcggcgcacctgcgcttccgtccgatcatcatgacttcgctggccttcatcctcggc
gtgctgccgctggtgatcgcaggcggcgccggttcggcctcgcagcgcgcgatcggtacc
ggcgtgatgggcggcatgatgacggcgtcgacgctgggcgtgctgttcgtccctatgttc
tttgtcgtggtgcgcaagatcttcaagggcagcgaacgccagcgcaagaagtacgcccac
gaagaagacaccagcaaggttatcgaggaaaaaatctaa
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