Microbacterium limosum: RYJ27_08525
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Entry
RYJ27_08525 CDS
T09965
Name
(GenBank) multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit
KO
K01616
multifunctional 2-oxoglutarate metabolism enzyme [EC:
2.2.1.5
4.1.1.71
1.2.4.2
2.3.1.61
]
Organism
mliy
Microbacterium limosum
Pathway
mliy00020
Citrate cycle (TCA cycle)
mliy00630
Glyoxylate and dicarboxylate metabolism
mliy00785
Lipoic acid metabolism
mliy01100
Metabolic pathways
mliy01110
Biosynthesis of secondary metabolites
mliy01120
Microbial metabolism in diverse environments
mliy01200
Carbon metabolism
mliy01210
2-Oxocarboxylic acid metabolism
Module
mliy_M00009
Citrate cycle (TCA cycle, Krebs cycle)
mliy_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
mliy00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
RYJ27_08525
00630 Glyoxylate and dicarboxylate metabolism
RYJ27_08525
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
RYJ27_08525
Enzymes [BR:
mliy01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
RYJ27_08525
2. Transferases
2.2 Transferring aldehyde or ketonic groups
2.2.1 Transketolases and transaldolases
2.2.1.5 2-hydroxy-3-oxoadipate synthase
RYJ27_08525
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.61 dihydrolipoyllysine-residue succinyltransferase
RYJ27_08525
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.71 2-oxoglutarate decarboxylase
RYJ27_08525
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
2-oxoacid_dh
E1_dh
Transket_pyr
OxoGdeHyase_C
2-oxogl_dehyd_N
SHOCT
Motif
Other DBs
NCBI-ProteinID:
WOQ70971
UniProt:
A0AAU0MJZ0
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All DBs
Position
1760245..1764006
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AA seq
1253 aa
AA seq
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MSSQVTGVGTSSEGEFGANEWLVDELYEQFKADKNSVDKAWWPVLEAYHPVDQHADPAPS
TPARSEQVSEAAPPKADAPAAARGEGFGEPRPVTAPVPVIGAQPVARTTARPASPQPIPA
QAPVSTAGGSDEALEDDKVTPLRGMPKTLAANMDESLTVPTATSVRTIPAKLMIDNRIVI
NNHMSRTRGGKISFTHLIGWAIIQTLKAFPSQNVFYAEIDGKPSVVAPAHINLGIAIDLP
KPDGTRALMVPSIKRADTMTFGEYLASYEDLVGRARAGKLSAADFQGTTISLTNPGGIGT
VHSVPRLMKGQGCIVGAGALEYPAEFQGASEKTLSELAIGKTITLTSTYDHRVIQGAGSG
EFLKKIHELLTGHHGFYNDIFAALRIPYAPIHWASDINVDVAERIDKTARVQELINSFRV
RGHLMADIDPLEYVQRTHPDLEIENHGLTFWDLDREFVTGGFGGKRVMKLRDILGVLRDS
YCRTIGLEYMHIQDPGQRRWFQEKVEVKYTKPGHDEQLRILSKLNEAEAFETFLQTKYVG
QKRFSLEGGEALIPLLDEILQGAAEARLDGAAIGMAHRGRLNVLTNIAGKTYGQVFREFE
GSVALGNKRGSGDVKYHLGTEGTFVDDRGTELPVYLAANPSHLETVNGVLEGIVRAKQDR
RPIGSFSWLPILVHGDAAFAGQGVVVETLQMSQLRAYRTGGTIHVVVNNQVGFTTLPQDG
RSSVYATDVAKTIQAPIFHVNGDDPEAVVRVAQLAFAYREEFHRDVVIDVVCYRRRGHNE
GDDPSMTQPLMTNLIEAKRSVRRLYTESLVGRGDITEEEYESAKRDFQDRLEVAFAETHA
AETGSHDIVTDGTVDGAEEELNWGELETTGVSGDVVRLIGDAFVNKPEGFTVHPKIQQLL
DKRLDMSRKGGIDWAFGELLAFGSLLLEGTNVRLAGQDSRRGTFVQRHSVLHDRANGQEW
IPLANLSDRQGRFWVYDSLLSEYAAMAFEYGYSVERPDSLVLWEAQFGDFANGAQSVIDE
FISSADQKWGQQSSVTLLLPHGYEGQGPDHSSARIERYLQMCAQDNMIVARPSTPASYFH
LLRRQAYARPRRPLVVFTPKAMLRLRGATSPVEDFTQGRFEPVLDDNRHPDASTVKKVLL
HAGKIHWDLRGELDKNPDPAIALVRVEQFYPAPIDELKAVIDRYPNAQLCWVQDEPENQG
AWPFIALEIVRHLGGRTIRPITRAAAASPATGSPKVHAQEHAELMKKALAPAE
NT seq
3762 nt
NT seq
+upstream
nt +downstream
nt
gtgtcgagccaggtgacgggcgtcgggacttcgagcgagggtgaattcggggccaacgaa
tggctcgtcgacgaactctacgagcagttcaaagcagacaagaactccgtcgacaaggca
tggtggccggtcctcgaggcctatcaccccgtcgaccagcacgcggacccggcgccttcg
acgcccgcgcgttccgagcaggtctcggaggctgcgccgcccaaggcggatgccccggcc
gccgcacgaggcgaaggcttcggcgagccgcgccccgtcaccgcccccgtgcccgtgatc
ggcgcgcagccggtcgcgcgcacgacggcgcggcccgcgtcgccgcagccgatccccgcg
caggcgcccgtctccacagcgggcggctcggacgaggcgctcgaggacgacaaggtcacg
cccctgcggggaatgccgaagaccctcgccgcgaacatggacgagtcgctgaccgtcccc
accgcgaccagcgtgcgcaccatccccgcgaagctgatgatcgacaaccgcatcgtcatc
aacaaccacatgtcgcgcacgcggggcggcaagatcagcttcacccacctcatcggctgg
gccatcatccagacgctcaaggcgttccccagccagaacgtcttctacgccgagatcgac
ggcaagccctccgtcgtcgctcccgcgcacatcaacctcggcatcgcgatcgacctgccc
aagccggacggcacgcgtgcgctaatggtcccgagcatcaagcgcgccgacacgatgacg
ttcggcgagtacctcgcctcctacgaggacctcgtcggccgcgcccgcgccggcaagctc
tccgcggccgacttccagggcacgaccatctcgctcaccaaccccggcggcatcgggacg
gtgcactccgttccccgcctcatgaagggccagggctgcatcgtcggcgccggtgccctg
gagtaccccgccgagttccagggcgcgagcgagaagacgctcagcgagctcgcgatcggc
aagacgatcacgctcacgagcacctacgaccaccgcgtcatccagggtgccgggtcgggc
gagttcctcaagaagatccacgagctgctcacggggcaccacgggttctacaacgacatc
ttcgcggccctgcgcatcccctacgccccgatccactgggcgagcgacatcaacgtcgac
gtcgccgaacggatcgacaagacggctcgcgtgcaggagctcatcaactcgttccgcgtc
cgcgggcacctcatggccgacatcgacccgctcgagtacgtccagcgcacccaccccgat
ctcgagatcgagaaccacgggctgacgttctgggacctcgaccgcgagttcgtcacgggc
ggcttcggcggcaagcgcgtcatgaagctccgcgacatcctcggcgtcctgcgggactcg
tactgccgcaccatcggcctcgagtacatgcacatccaggacccgggtcagcgccgctgg
ttccaggagaaggtcgaggtgaagtacaccaagcccggccacgacgagcagctgcgcatc
ctgtccaagctcaacgaggccgaggcgttcgagaccttcctgcagacgaagtacgtcggg
cagaagcggttcagcctcgagggcggcgaagcgctcatcccgctgctcgacgagatcctc
cagggcgccgccgaggcccggctcgacggcgcggccatcggcatggcgcaccgcggtcgc
ctcaacgtgctgacgaacatcgccggcaagacgtacggccaggtcttccgcgagttcgag
ggaagcgtcgccctcggcaacaagcgcgggtccggcgacgtgaagtaccacctcggcacc
gaggggacgttcgtcgatgaccgcggcaccgagcttcccgtgtacctcgcagcgaacccc
tcccacctggagaccgtgaacggcgtgctcgagggcatcgtccgcgccaagcaggaccgc
cgcccgatcgggtcgttctcgtggctgccgatcctcgtccacggcgacgcggccttcgcc
ggtcagggcgtcgtcgtcgagacgctgcagatgtcgcagctgcgcgcctaccgcaccggc
ggcaccatccacgtcgtggtgaacaaccaggtgggcttcacgaccctcccgcaggacggc
cgcagttcggtgtacgccacggatgtcgcgaagacgatccaggcgccgatcttccacgtc
aacggcgatgaccccgaggccgtcgtccgggtcgcccagctcgccttcgcctaccgcgag
gagttccaccgcgacgtcgtgatcgacgtggtgtgctaccgccgacgcggacacaacgag
ggcgacgacccctcgatgacgcagccgctgatgacgaatctcatcgaggccaagcgctcg
gtgcggcgcctctacaccgagtcgttggtgggtcgcggcgacatcaccgaggaggagtac
gaaagcgccaagcgcgatttccaggaccgcctcgaggtcgcgttcgccgagacccacgcc
gccgagacgggctcgcacgacatcgtcaccgacggcaccgtggacggcgccgaggaggag
ctgaactggggcgagctcgagacgaccggcgtctccggcgacgtcgtgcgcctgatcggc
gacgcgttcgtcaacaagcccgagggcttcacggtgcacccgaagatccagcagttgctc
gacaagcgcctcgacatgagccgcaagggcggcatcgactgggcgttcggagagctcctg
gcgttcggctccctgctgctggagggcacgaacgtccgcctggcgggacaggactcccgt
cgaggcacgttcgtgcagcgccactcggtgctccacgatcgcgccaacgggcaggagtgg
atccccctcgccaacctcagcgatcgtcagggccgcttctgggtctacgactccctgctg
agcgagtacgccgcgatggcgttcgagtacggctattccgtggagcgtcccgactcgctc
gtgctgtgggaggcgcagttcggcgacttcgccaacggcgcccagtcggtcatcgacgag
ttcatctcctccgccgaccagaaatggggccagcagtcgagcgtcacgctgctgctcccc
cacggctacgagggtcagggccccgaccactcctccgcccgcatcgagcgctacctgcag
atgtgcgcccaggacaacatgatcgtcgcccggccgtccactcccgcgtcgtacttccat
ctgctgcgtcgtcaggcctacgcgcggccccggcgccccctggtggtcttcaccccgaag
gcgatgctgcggctgcgcggcgcgaccagtccggtggaggacttcacgcagggacgcttc
gagcccgtgctggacgacaaccgccatcccgacgcttcgacggtgaagaaggtgctcctg
cacgcggggaagatccattgggatctgcgcggcgagctcgacaagaaccccgaccccgcc
atcgccctggtgcgcgtggagcagttctatccggcaccgatcgacgagctgaaggccgtc
atcgaccgctacccgaacgcacagctctgctgggtgcaggacgagcccgagaatcagggc
gcctggccgttcatcgcgctcgagatcgtccgccatctgggtggccgtacgatccggccc
atcacgcgcgccgcggccgcctcgcccgccaccggctcgccgaaggtgcacgcacaggag
cacgccgagctgatgaagaaggcgctcgctccggccgagtga
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