Mycobacterium lacus: MLAC_29450
Help
Entry
MLAC_29450 CDS
T07377
Symbol
ligA
Name
(GenBank) DNA ligase
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
mlj
Mycobacterium lacus
Pathway
mlj03030
DNA replication
mlj03410
Base excision repair
mlj03420
Nucleotide excision repair
mlj03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mlj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MLAC_29450 (ligA)
03410 Base excision repair
MLAC_29450 (ligA)
03420 Nucleotide excision repair
MLAC_29450 (ligA)
03430 Mismatch repair
MLAC_29450 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mlj03032
]
MLAC_29450 (ligA)
03400 DNA repair and recombination proteins [BR:
mlj03400
]
MLAC_29450 (ligA)
Enzymes [BR:
mlj01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
MLAC_29450 (ligA)
DNA replication proteins [BR:
mlj03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
MLAC_29450 (ligA)
DNA repair and recombination proteins [BR:
mlj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
MLAC_29450 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MLAC_29450 (ligA)
MMR (mismatch excision repair)
DNA ligase
MLAC_29450 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
MLAC_29450 (ligA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_aden
OB_DNA_ligase
Nlig-Ia
HHH_2
BRCT
DNA_ligase_ZBD
HHH_5
PTCB-BRCT
HHH
Auto_anti-p27
BRCT_2
Motif
Other DBs
NCBI-ProteinID:
BBX97651
UniProt:
A0A1X1YQN3
LinkDB
All DBs
Position
complement(3161009..3163102)
Genome browser
AA seq
697 aa
AA seq
DB search
MTSPEVLRPEVLREWQELAEEVREHQFRYYVRDAPIISDAEFDALVRRLEALEEQYPELR
TPDSPTQLVGGAGFATEFEPVDHLDRMLSLDNAFSTEELDAWATRIRAEVGPDIGAAHYL
CELKIDGVALSLVYRGGRLTAAATRGDGRTGEDVTLNARTIDDVPERLSASDDYPVPEVL
EVRGEVFFRLEDFQALNASLVEAGKAPFANPRNSAAGSLRQKDPAVTARRKLRMICHGLG
HTEGFRPATQHEAYLALRAWGLPVSEHTTVVNDIAGVRERIDYWGEHRHEVDHEIDGVVV
KVDEMALQRRLGSTSRAPRWAIAYKYPPEEAQTKLLDIRVNVGRTGRVTPFAFMTPVKVA
GSTVGQATLHNASEVKRKGVLIGDTVVIRKAGDVIPEVLGPVVDLRDGSEREFVMPTTCP
ECGAPLAPEKEGDADIRCPNARGCPAQLRERVFHVASRNALDIEVLGYEAAVELLQTHVI
ADEGDLFALTEDGLLRTELFRTKAGDLSANGKRLLANLDKAKAAPLWRVLVALSIRHVGP
TAARALATEFGSLDAIIAASTDQLAAVEGVGPTIAAAVTEWFTVDWHREIVDKWRAAGVR
LVDERDATVPRTLAGLTIVVTGSLTGFSRDDAKEAIVARGGKAAGSVSKKTSYVVAGDSP
GSKYDKAVQLGVPILDEDGFRRLLAEGPGDTEAAGVP
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
gtgacttcgcctgaggtgttgcgcccagaagtgttgcgcgagtggcaggagctggccgag
gaggtgcgcgaacaccagttccgctactacgtgcgggacgcgccgatcatctccgacgcg
gagttcgacgccctagtgcgccggctggaggccctcgaggagcagtaccccgagctgcgc
acccccgactcacccacccagctggtcggcggcgccggcttcgccaccgagttcgagccg
gttgaccacctggacagaatgctcagcctggacaatgcattcagcacggaggaactcgac
gcctgggccacccgcatccgtgcggaggtcggcccggacatcggggccgcgcactatcta
tgtgagctcaagatcgacggtgtcgcattgtcgctggtctaccggggcggacgcctgacc
gcggcggcgacccggggcgacgggcgcaccggcgaggacgtcacgctgaacgcccgcacc
atcgacgacgtccccgaacggctcagcgccagcgacgattacccggtgcccgaggttctc
gaggtccgcggcgaggtgttcttccggctggaggacttccaggcgctcaacgccagcctc
gtcgaggcgggcaaggcgccgttcgccaaccctcgcaacagcgcggcgggatcgctgcgt
cagaaagaccctgcggttacggcgcgccgtaagctgcggatgatctgccacgggctgggg
cacaccgaaggctttcgcccggccacgcagcacgaagcctatctggcattgcgggcctgg
gggctgccggtttccgagcacaccaccgtcgtgaacgacatcgccggcgtgcgggagcgc
atcgactactggggcgagcatcgccacgaggtggaccacgaaatcgacggtgtggtagtc
aaagtcgacgagatggcgctgcagcgcaggctgggttccacctcgcgggctccgcgctgg
gccatcgcctacaagtacccgcccgaggaagcgcagaccaagctgctcgacatccgggtg
aacgtcggtcgcaccgggcgggtcacgccgttcgcgttcatgacgccggtgaaggtcgcc
gggtcgacggtggggcaggcgacgctgcacaacgcctcggaggtgaagcgcaagggcgtg
ctgatcggcgacaccgtggtgatccgcaaggctggcgacgtgatccccgaggtgctgggt
cccgtggtcgacctgcgcgacgggtccgagcgcgaattcgtcatgcccacaacatgtccc
gagtgcggcgccccgttggcgccggagaaggaaggcgatgccgacattcgctgccccaat
gcccgcggctgcccggcgcaattgcgggagcgggtatttcacgtcgccagccgaaacgcc
ttggacatcgaggtgctgggctatgaggccgcggtcgagctgctgcagacacacgtgatc
gcggacgagggcgacctgtttgccctcaccgaagacggcctgttgcgcaccgaactcttc
cggaccaaggccggcgacttgtcggccaacggcaaacggctactcgccaacctcgacaag
gcaaaggccgcaccgctgtggcgggtgctcgtggcgttgtcgatccgccatgtcggcccg
acggccgcccgcgcactggccaccgagttcggcagtctcgacgcgattatcgccgcatcc
actgaccagctggccgcggtggagggtgtgggacctaccatcgctgccgcggtcaccgag
tggttcaccgtcgactggcaccgcgagatcgtcgacaagtggcgcgcggccggggttcga
ctggtcgacgagcgcgacgccaccgtcccacgcaccctggccgggctgaccatcgtggtc
acgggctcgctgaccggcttttcccgcgacgacgccaaggaggcaatcgtggcgcgcggc
ggcaaggccgccggatcggtgtcaaagaagacctcctacgttgtcgccggcgactccccg
ggatccaaatacgacaaagcggtgcagttgggcgtgcccattctcgatgaggacgggttc
cgaaggctcttggcggaagggcctggtgacaccgaagcagcaggcgtgccatag
DBGET
integrated database retrieval system
