Mustela lutreola (European mink): 131813802
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Entry
131813802 CDS
T09578
Symbol
LIG4
Name
(RefSeq) DNA ligase 4
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
mlk
Mustela lutreola (European mink)
Pathway
mlk03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
mlk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
131813802 (LIG4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mlk03400
]
131813802 (LIG4)
Enzymes [BR:
mlk01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
131813802 (LIG4)
DNA repair and recombination proteins [BR:
mlk03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
131813802 (LIG4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
BRCT
DNA_ligase_IV
DNA_ligase_A_C
BRCT_2
RNA_ligase
mRNA_cap_enzyme
ATG17_like
Motif
Other DBs
NCBI-GeneID:
131813802
NCBI-ProteinID:
XP_059000267
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All DBs
Position
13:4115821..4124314
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AA seq
911 aa
AA seq
DB search
MAASQTSPTVASHVPFADLCSTLERIQRSKGRAEKIRHFREFLDSWRRFHNALHKNQKDV
KDSFYPAMRLILPQLERERMAYGIKETMLAKLYIELLNLPKGGKDALKLLNYRTPTGTRG
DAGDFATIAYFVLKPRCLQKGSLTIQQVNDILDSIASNNSARRKDLIKKSLLQLISQSSA
LEQKWLIRMIVKDLKLGFSEQSVFSVFHNDAAELHNVTTDLEKVCRQLHDPSVGLSDISI
TLFSAFKPMLAAIADIERIEKDMKHQSFYIETKLDGERMQMHKQGGEYQYFSRNGFNYTD
QFGKSPQEGSLTPFIHSAFKTDIQICILDGEMMAFNPNTQTFMQKGTKFDIKRMVEDSDL
QTCYCVFDVLMVNNKKLGRETLKKRYEILTSVFTPIPGRIEIVQKTQAHTQKEVIDALNE
AIDKREEGIMIKHPLSIYKPDKRGEGWLKIKPEYVDGLVDELDILIVGGYWGKGSRGGMM
SHFLCAVAETPPPGEKPSVFHTLCRVGSGYTMKELYDLGLKLAKHWKPFNRKAPPSSILC
GTEKPEVYIEPCHSVIVQVKATEIVPSDMYKTGCTLRFPRIERIREDKEWHECATCDGLE
QLRGKASGKLASKHLYVSDGDEPQEKKRKAAPKMRKVIGIIEHLKAPNLSNVNKVSNIFE
DVEFCVMNGTDGHPKPDLENRIAEFGGYIVQNPGPDTYCVIAGSENIRVKNIISSDKHDV
VKPEWLLECFKTKSCVPWQPRFMIHMCPSTKEHFAREYDCYGDSYFVDTDLNRLKEVFSG
IKNPSAQAPGEMASVIADLEHRYSWDGCPLSMFRHCVIYVDMYAVVNDLSTSIVGTRLAV
TALELRFHGAKVVSHLAQGVSHVIVGEDQSRVADLKAFRRTLKRKFKILQQDWVTDSIDK
CELQEENRYLV
NT seq
2736 nt
NT seq
+upstream
nt +downstream
nt
atggccgcctcgcagacttcaccaactgttgcatctcatgttccttttgcagacttgtgt
tcaacgttagaacgaatacagagaagtaaaggacgagcagaaaaaatcagacacttcagg
gaatttttagattcttggagaagatttcacaacgcccttcataagaaccaaaaagatgtc
aaagactctttttacccagcaatgagacttattcttcctcagctggaaagagagagaatg
gcgtatggaatcaaagaaaccatgcttgctaaactttatatcgaattgcttaatttgcct
aaaggaggaaaagatgcccttaaacttttaaattacagaacgcccaccggaactcgtgga
gatgctggtgactttgcaacaattgcatattttgtgttgaaaccaagatgtttgcagaaa
ggaagtttaaccatacagcaggtaaatgacattttagactcaattgccagcaataattct
gccagaagaaaggacctaattaagaagagtcttcttcagctaataagtcagagttcagca
ctggaacagaagtggcttatacggatgattgtaaaggacttaaaactcggtttcagcgaa
cagtctgtattttctgttttccataatgatgctgccgagttgcataacgtcaccacagat
ctggaaaaggtctgtaggcagctgcatgacccttccgtaggactcagtgacatctccatc
actttattctcagcctttaaaccgatgctggctgctatagcagacattgagcggatcgag
aaggacatgaaacaccagagcttctacattgaaaccaagctcgatggggagcgcatgcag
atgcacaagcagggtggggagtaccagtacttctcccgaaacggattcaactacacggat
cagtttggcaaatctccacaggaaggttctctcacaccgttcattcacagtgctttcaaa
acagacatacagatctgtatcctggatggcgagatgatggccttcaaccccaacacacag
actttcatgcaaaaggggactaagtttgatatcaaaagaatggtggaggattctgatctg
cagacttgttactgtgtgtttgatgtgctgatggttaataataaaaagctgggacgtgag
accctgaagaaaaggtatgagattcttaccagtgtttttacaccaatacccggtaggata
gaaatagtgcagaagacacaagctcatactcagaaagaagtgatcgatgctttgaatgaa
gcaatagataaacgggaagaggggatcatgattaaacaccctctgtcgatttacaagccc
gacaaaagaggtgaaggatggctgaagattaaaccagagtacgtggacgggctggtggat
gagctggacatcctaatcgtcgggggctactgggggaagggttcccgagggggcatgatg
tctcatttcttatgtgccgtagcagagacaccgcctcctggtgaaaaaccatcggtgttt
catactctgtgccgtgttggttcaggttacaccatgaaagaactgtacgatctgggtttg
aagttggccaaacactggaagcctttcaataggaaagctccaccgagcagcattttatgt
ggaacggagaagccagaggtgtacattgagccctgtcattctgtcattgttcaggttaag
gccacagagatcgtccccagcgatatgtataagactggctgcacactccgttttccacga
atcgagaggatcagagaagacaaagagtggcatgagtgcgccacctgcgacgggctggag
cagcttcgcgggaaagcctcgggaaagctggcttccaaacacctgtacgtcagcgacggc
gatgagccacaagaaaagaagcggaaggctgccccgaagatgaggaaagttatcggaatt
attgagcacttaaaagctcccaacctttctaatgtaaacaaagtgtctaatatatttgaa
gatgtggagttctgtgtcatgaacggcacggatggccatccgaagcccgacctggagaac
agaattgccgaatttggtggttacatagtacagaatccaggcccagacacgtactgcgtc
attgccgggtccgagaacatcagagtgaaaaacataatttcttcggacaaacatgatgtc
gtcaagcccgagtggctgttggagtgttttaagaccaaaagctgcgtgccgtggcagcct
cgctttatgattcacatgtgcccgtcgacaaaagagcattttgcccgtgaatacgattgt
tacggtgacagttattttgttgatacggatttgaaccgactgaaggaagtgttctcagga
attaaaaatcccagcgcacaagctcctggagaaatggcttctgtgattgctgatttagag
caccggtattcctgggacggctgccctctcagtatgtttcggcactgcgttatttacgtg
gacatgtatgctgttgttaatgacttgagtaccagcatcgtgggaacaagattagccgtt
acagctttggagcttcggtttcatggagccaaagtggtttctcatttagctcagggagtg
tctcatgtcatcgttggggaggatcagagtcgtgtggcagatttaaaagcttttcgaaga
acccttaagagaaagtttaaaatcctgcaacaagattgggtcactgattcaatagacaag
tgtgaattgcaggaggaaaatcggtacttggtttaa
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