Mustela lutreola (European mink): 131816108
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Entry
131816108 CDS
T09578
Symbol
EFTUD2
Name
(RefSeq) 116 kDa U5 small nuclear ribonucleoprotein component
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
mlk
Mustela lutreola (European mink)
Pathway
mlk03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mlk00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
131816108 (EFTUD2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mlk03041
]
131816108 (EFTUD2)
Spliceosome [BR:
mlk03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
131816108 (EFTUD2)
Complex C
U5 SnRNP specific factors
131816108 (EFTUD2)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
EFG_III
EFL1
EF-G_D2
Motif
Other DBs
NCBI-GeneID:
131816108
NCBI-ProteinID:
XP_059004473
LinkDB
All DBs
Position
15:17946332..17984312
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AA seq
972 aa
AA seq
DB search
MDTDLYDEFGNYIGPELDSDEDDDELGRETKDLDEMDDDDDEDDVGDHDEDHPGMEVVLH
EDKKYYPTAEEVYGPEVETIVQEEDTQPLTEPIIKPVKTKKFTLMEQTLPVTVYEMDFLA
DLMDNSELIRNVTLCGHLHHGKTCFVDCLIEQTHPEIRKRYDQDLCYTDILFTEQERGVG
IKSTPVTVVLPDTKGKSYLFNIMDTPGHVNFSDEVTAGLRISDGVVLFIDAAEGVMLNTE
RLIKHAVQERLAVTVCINKIDRLILELKLPPTDAYYKLRHIVDEVNGLISMYSTDENLIL
SPLLGNVCFSSSQYSICFTLGSFAKIYADTFGDINYQEFAKRLWGDIYFNPKTRKFTKKA
PTSSSQRSFVEFILEPLYKILAQVVGDVDTSLPRTLDELGIHLTKEELKLNIRPLLRLVC
KKFFGEFTGFVDMCVQHIPSPKVGAKPKIEHTYTGGVDSDLGEAMSDCDPDGPLMCHTTK
MYSTDDGVQFHAFGRVLSGTIHAGQPVKVLGENYTLEDEEDSQICTVGRLWISVARYHIE
VNRVPAGNWVLIEGVDQPIVKTATITEPRGNEEAQIFRPLKFNTTSVIKIAVEPVNPSEL
PKMLDGLRKVNKSYPSLTTKVEESGEHVILGTGELYLDCVMHDLRKMYSEIDIKVADPVV
TFCETVVETSSLKCFAETPNKKNKITMIAEPLEKGLAEDIENEVVQITWNRKKLGEFFQT
KYDWDLLAARSIWAFGPDATGPNILVDDTLPSEVDKALLGSVKDSIVQGFQWGTREGPLC
DELIRNVKFKILDAVVAQEPLHRGGGQIIPTARRVVYSAFLMATPRLMEPYYFVEVQAPA
DCVSAVYTVLARRRGHVTQDAPIPGSPLYTIKAFIPAIDSFGFETDLRTHTQGQAFSLSV
FHHWQIVPGDPLDKSIVIRPLEPQPAPHLAREFMIKTRRRKGLSEDVSISKFFDDPMLLE
LAKQDVVLNYPM
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
atggataccgacttgtatgatgagtttgggaattatattgggccagagcttgattctgat
gaagatgatgatgaattgggcagagagaccaaagatcttgatgagatggacgacgatgac
gacgaggatgacgtaggagaccatgacgaggaccacccagggatggaggtggtgctgcac
gaggacaagaagtactaccccacggccgaggaggtgtacggccccgaagtggagaccatc
gttcaggaggaagacacccagcctctcaccgaacctattattaagccggtgaaaaccaag
aagttcactctgatggagcagacattacctgtcacggtgtatgaaatggatttcttggca
gatctgatggataactcggaactcatcagaaatgtgaccctctgtggccatctccaccat
ggcaagacgtgttttgtggattgcttaatagagcagactcacccggaaatcaggaagcgt
tatgaccaagatctgtgctatactgacatcctcttcacagagcaggagagaggtgttggc
atcaaaagcactcccgtgacagtggtcttgccagataccaaaggaaaatcttacctcttc
aatatcatggacactccaggacatgtgaatttttctgatgaggtcacggctggcttgcgc
atctcagatggagttgtcctgttcattgatgccgctgaaggcgtgatgctgaacacagag
cggctgatcaagcacgcggtgcaggagaggctggcggttaccgtgtgcatcaacaagatt
gaccggctgattctggaactgaagctgcctcccaccgatgcttattacaagctgcggcac
atcgtggatgaggtcaatggactcataagcatgtattccaccgatgagaacctgatcctt
tccccactcctgggcaacgtctgcttctccagctcccagtacagcatctgcttcacgctg
ggctcctttgccaagatctatgctgacaccttcggtgacattaactaccaggaatttgct
aaaagactctggggtgacatttatttcaaccccaaaacacgaaagttcaccaaaaaggcc
ccaaccagcagctcccagaggagctttgtggagtttatcttggagcccctttataagatc
ctcgctcaggtggtgggtgacgtggacaccagcctccccaggactctggatgagcttggc
attcacctgaccaaggaggaactgaagctgaacatccgccccctgctcaggctggtctgc
aaaaaattctttggcgagttcacaggctttgtggacatgtgtgtgcagcatatcccctct
ccaaaggtgggcgccaagcccaagattgagcacacctacaccggtggcgtggattctgat
ctcggcgaggccatgagcgactgtgaccccgacggtcccctgatgtgccacactaccaag
atgtacagcacagatgatggagttcaatttcatgcctttggccgggtgctgagcggcacc
atccacgccgggcagcctgtgaaggtgctgggggagaactataccctggaggatgaggag
gactcccagatatgcaccgtgggccgcctctggatctctgtagccaggtaccacattgag
gtgaaccgtgttcctgctggcaactgggttctgatcgaaggtgttgatcaaccaattgtg
aagacagcgaccataactgaacctcgaggcaatgaggaggctcagattttccggcctctg
aagttcaacaccacgtctgttatcaagattgctgtggaaccggtcaacccctcagagctg
cccaagatgctggacggtctgcgcaaggtcaacaagagctatccgtccctcaccaccaag
gtggaagagtccggggagcatgtgattctgggtaccggggagctctacctggactgtgtg
atgcacgacttgcggaagatgtactcagagatcgacatcaaggtggctgaccctgttgtc
acattttgtgagacggtagtggaaacatcttcactcaagtgctttgctgaaacacccaat
aagaagaacaagatcaccatgattgctgagccccttgagaagggccttgccgaggacata
gagaacgaggtggtccagatcacgtggaacaggaagaaactcggagaattcttccagacc
aagtacgattgggatctgctggctgcacgttccatctgggcttttggccctgatgccacc
ggccccaacatcctggtggatgataccctgccctctgaggtggacaaggctcttcttggc
tcagtgaaggacagtatcgttcaaggtttccagtggggaacccgagagggacccctctgt
gatgagctgattcgaaatgtcaagtttaagatcctggatgcagtggttgcccaagagccc
ctgcaccggggcgggggccaaatcatccccacggcaaggagagtcgtctattctgccttc
ctcatggccactcctcgtctgatggagccttactactttgtggaggtccaggcccctgcg
gattgtgtctccgctgtgtacaccgtcctggccaggcgcagggggcatgtgactcaggat
gcacccatcccaggctcccctctctacaccatcaaagctttcatccccgccattgattct
tttggctttgagactgatctgcggactcacacccaagggcaagccttttccttgtctgtc
ttccaccattggcagattgtgcccggtgatcctctggacaagagcattgtcatccgcccg
ctggagccacaacctgctcctcacctggcccgggaattcatgatcaaaacccgtcgcagg
aagggcctgagcgaggacgtaagcatcagcaagttcttcgatgaccccatgttgctggag
ctcgccaagcaggatgttgtgctcaactaccccatgtga
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