Mycobacterium lepromatosis: MLPF_0993
Help
Entry
MLPF_0993 CDS
T08064
Symbol
ligA
Name
(GenBank) DNA ligase (NAD(+)) LigA
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
mlm
Mycobacterium lepromatosis
Pathway
mlm03030
DNA replication
mlm03410
Base excision repair
mlm03420
Nucleotide excision repair
mlm03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mlm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MLPF_0993 (ligA)
03410 Base excision repair
MLPF_0993 (ligA)
03420 Nucleotide excision repair
MLPF_0993 (ligA)
03430 Mismatch repair
MLPF_0993 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mlm03032
]
MLPF_0993 (ligA)
03400 DNA repair and recombination proteins [BR:
mlm03400
]
MLPF_0993 (ligA)
Enzymes [BR:
mlm01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
MLPF_0993 (ligA)
DNA replication proteins [BR:
mlm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
MLPF_0993 (ligA)
DNA repair and recombination proteins [BR:
mlm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
MLPF_0993 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MLPF_0993 (ligA)
MMR (mismatch excision repair)
DNA ligase
MLPF_0993 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
MLPF_0993 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
OB_DNA_ligase
HHH_2
BRCT
HHH_5
DNA_ligase_ZBD
PTCB-BRCT
Nlig-Ia
HHH
DprA_N
Motif
Other DBs
NCBI-ProteinID:
UKN41972
LinkDB
All DBs
Position
complement(974686..976770)
Genome browser
AA seq
694 aa
AA seq
DB search
MSSPEADPIGPELLRQWRKLAEEVREHQFRYYVRDAPIISDAEFDALLGRLTVLEEQHPE
LRTPDSPTQLIGGAGFTTDFVATEHLERMLSLDNASSEDELDAWITRIRREIGNDAHYLC
ELKVDGVALSLVYRNGLLNRATTRGDGHTGEDVTLNARTIEDVPERLTVSDIYPIPEVLE
VRGEVFFRVTDFQALNTSLVEEGKNPFANPRNSAAGSLRQKDPAVTAHRTLRMICHGLGH
IEGFRPATQHQAYLALRAWGLPVSDHTTLVNDIAGVQRRIAYWAEHRHEVDHEIDGIVVK
IDELALQRRLGSTSRAPRWAIAYKYLPEEAQTKLLDIRVNVGRTGRVTPFAFMTPVKVAG
STVGQATLHNASEVKRKGVLIGDTVVIRKAGEVIPEIVGPVVDLRDGSESEFVMPTTCPE
CGTTLAPEKEGDTDIRCPNARSCPGQLRERVFHVASRSVLDIQGLGYEAGVALLAAQVIT
SEGDLFTLTEDDLLRTELFRNKAGKLSANGKRLLVNVDKAKTAPLWRVLVALSIRHVGPT
AARALAAEFGSIDAILAASPEQLAAVEGVGAAIAAAVTEWFAVDWHRAIVDKWRAAGVRM
VDERDTSVPPTCEGLTIVVTGSLAGFSRDDAKEAIVARGGKVAGAVSKKIAYVVVGDLPG
SKYDKAIELGVPILDEDGFRLLLEQGPPVQQVVD
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
gtgagttcgcccgaagctgaccctatcggacccgagctgctgcggcagtggcgaaagctg
gctgaagaggtgcgtgaacaccagttccgttactatgtgcgtgacgcaccgatcatctct
gacgcggagtttgatgctctactaggcaggctcaccgtgctggaggaacagcatcccgag
ctgcgaacacccgattcacctacccagctgataggcggtgccggcttcacgactgatttc
gtggcgaccgaacatctcgaacggatgctcagcctcgacaacgcctccagtgaggatgaa
ctcgacgcctggatcactcgcatccgcagagaaatcggtaatgacgcccattatttgtgt
gagctcaaggtcgacggtgtcgcattgtcgttggtctatcggaatggactcctgaaccgc
gccacgactcggggtgatggtcacaccggcgaagacgtaacgctgaacgcgcggaccatc
gaagatgtaccggaacggctaaccgtcagcgatatttacccgataccagaggttctcgag
gttcgcggcgaggtgttcttccgagtaacggactttcaagcgcttaacacgagcctcgtt
gaagagggcaaaaatccgttcgctaacccacgaaacagcgcggcgggctcgctgcgtcag
aaagatccggcggtcacggctcaccgtacgctgcggatgatttgtcatggactggggcac
atcgaaggctttcgccccgctacccagcaccaggcttacctagcgttacgggcctggggg
ctgccggtgtccgatcatacgacgttggtgaacgacatagctggcgtccagagacgcatc
gcatactgggccgagcatcgtcacgaggtggaccacgaaatcgacgggatagtggtcaaa
atcgacgagttggcattgcagcgcaggctgggttccacctcgcgagctccacgatgggcc
atcgcttacaagtacctacccgaggaggcgcagaccaagctgctcgacatccgggtgaac
gttggccgcaccgggcgggttacgccgtttgcgttcatgacgccggtgaaggttgccggg
tcgacggtcgggcaggcgactctgcacaacgcttctgaggttaaacgcaaaggtgtgctg
attggtgacaccgtggtgatccgcaaggccggcgaggtgattcccgaaattgtgggacct
gtggttgacttgcgtgacgggtccgaaagcgaatttgtcatgcctacaacgtgtcccgag
tgcggtactactttggcgccagaaaaggaaggcgataccgacatccgctgccccaatgcc
aggagctgcccggggcaactgcgagagcgagtgtttcacgtcgctagccgcagcgtgctg
gacatccagggattgggttacgaggccggcgtggcgttgctggctgcgcaagtgatcacc
agtgagggagacctgttcaccctcaccgaggatgatttgttacgcaccgagctcttccgg
aacaaggcagggaagctgtcggcgaatggcaaacggttgttagttaacgtcgacaaagct
aaaaccgcaccgctgtggcgagtgctggtggcgttgtcgatccggcatgtcgggccaaca
gctgcgcgagccctggccgccgagttcggtagtattgacgcaatcttggccgcatccccc
gagcagctggctgccgtcgaaggggtaggggccgccatcgcggccgcggttaccgagtgg
tttgccgttgactggcatcgcgcgattgtcgataagtggcgggctgcaggggtgcggatg
gtcgatgaacgcgacaccagcgtgccgcccacatgcgaggggctgactatcgtggtcact
ggttcgttagcagggttttcccgtgacgacgccaaggaagcgatcgtggcgcgcggaggc
aaggtcgctggtgcggtatctaagaagatcgcctacgtggtcgttggcgatttgccggga
tccaaatatgacaaggcgatcgagctcggggtgccgatcctcgacgaagacgggtttcgc
cttttgcttgagcagggacctccggtgcagcaagtcgtcgactag
DBGET
integrated database retrieval system
