Mycobacterium lepraemurium: MLM_3091
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Entry
MLM_3091 CDS
T05534
Name
(GenBank) DNA ligase
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
mlp
Mycobacterium lepraemurium
Pathway
mlp03030
DNA replication
mlp03410
Base excision repair
mlp03420
Nucleotide excision repair
mlp03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mlp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MLM_3091
03410 Base excision repair
MLM_3091
03420 Nucleotide excision repair
MLM_3091
03430 Mismatch repair
MLM_3091
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mlp03032
]
MLM_3091
03400 DNA repair and recombination proteins [BR:
mlp03400
]
MLM_3091
Enzymes [BR:
mlp01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
MLM_3091
DNA replication proteins [BR:
mlp03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
MLM_3091
DNA repair and recombination proteins [BR:
mlp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
MLM_3091
NER (nucleotide excision repair)
GGR (global genome repair) factors
MLM_3091
MMR (mismatch excision repair)
DNA ligase
MLM_3091
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
MLM_3091
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
OB_DNA_ligase
HHH_2
BRCT
DNA_ligase_ZBD
HHH_5
PTCB-BRCT
Nlig-Ia
HHH
Auto_anti-p27
BRCT_2
Motif
Other DBs
NCBI-ProteinID:
ATA29183
LinkDB
All DBs
Position
complement(3136538..3138583)
Genome browser
AA seq
681 aa
AA seq
DB search
MRRQWQELAETVREHQFRYYIKDAPIISDAEFDALFNELLALEERHPELRVADSPTQLVG
GAGFATDFAEAAHLERMLSLDDVFDTDELVAWSNRVENEIGKDPHYLCELKIDGVALSLV
YRDGLLERAATRGDGRVGEDVTLNARTIDDVPERLSPSDDFPVPALLEVRGEVFFLLADF
EALNASLVEDGKAPFANPRNSAAGSLRQKNPAVTARRKLRMICHGIGRTEGFSPKTQHEA
YTALSVWGLPVAEQTVRVRGLAAVQERIGYWGEHRYDLQHEIDGVVAKVDDVALQRRLGA
TSRAPRWAVAYKYPPQEAQTKLLDIRVNVGRTGRVTPFAFMTPVKVAGSTVGLATLHNAA
EVKRKGVLIGDTVMTRKAGDVIPEVLGPVVDLRDGTEREFVMPTTCPECGTPLAPAKEGD
ADIRCPNARSCPAQLRERVFHVAGRGALDIEGLGYEAATALLKAGVIADEGDLFALTEDD
LLRTELFRTKAGTLSANGTRLLQNLQKAKKAALWRVLVALSIRHVGPTAARALATEFGDL
DSIMSASTERLAAVEGVGPTIAAALTEWFTVDWHRAIVDKWRAAGVRMADERPSSVPRTL
EGLTVVVTGSLAGFSRDDAKEAILARGGRAAGSVSKKTDYVVAGDAPGSKYDKAVEFGVP
ILDEDGFRKLLAEGPPETPAD
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
gtgcggcggcagtggcaggagctggccgaaacggtccgcgaacaccaattccgctactac
atcaaggacgcgccgatcatctcggacgccgagttcgacgcgctgttcaacgagctgctc
gccctggaggagcgtcaccccgagctgcgggtggccgattcgcccacgcagctggtcggc
ggggcgggtttcgccaccgacttcgctgaggcggcgcacctggagcggatgctgagcctc
gacgacgtcttcgacaccgacgagctggtcgcctggagcaatcgcgtcgagaacgagatc
ggcaaggacccgcactacctgtgcgagctcaagatcgacggggtggctctgtcgctggtc
taccgcgacggcctgctggaacgcgccgccacccggggcgacggccgggtcggcgaggac
gtgacgctcaacgcccgcaccatcgacgacgtgcccgaacgcctctcgcccagcgacgac
tttccggtgccggcgctgctcgaggtgcgcggtgaggtgttcttcctgctcgccgacttc
gaggcgctcaacgccagcctggtcgaagacggcaaggcgccgttcgccaatccgcgcaac
agcgcggccgggtcgctgcgccagaagaacccggccgtcaccgcgcggcgcaagctgcgg
atgatctgccacggcatcggccgcaccgaggggttttcgccgaaaacccagcacgaggcc
tacaccgcgctgagcgtgtgggggctgccggtggccgaacagaccgtgcgggtgcgcggg
ctggctgcggtgcaggagcggatcggctattggggcgagcaccgctacgacctgcaacac
gagatcgacggtgtggtcgccaaagtcgacgacgtcgcgttgcagcgccggctcggtgcc
acctcgcgcgcgccgcgctgggcggtcgcctacaagtacccgccccaggaggcgcagacc
aagctcctcgacatccgtgtcaacgtcgggcgcaccgggcgcgtcaccccgtttgcgttc
atgaccccggtcaaggtggccgggtcgacggtggggctggccaccctgcacaacgccgcc
gaggtcaagcgcaagggcgtgctgatcggcgacaccgtgatgacccgcaaggccggcgac
gtgatccccgaggtgctgggcccggtcgtcgacctgcgcgacggcaccgaacgcgaattc
gtcatgcccacaacgtgtcccgagtgcggcaccccgctggcgccggccaaggagggcgac
gccgacatccgctgccccaacgcccggtcctgtccggcgcagctgcgggagcgggtgttt
cacgtcgccggccgcggcgcactcgacatcgaggggctgggctacgaagcggccaccgcg
ctgctcaaggcgggggtgatcgccgacgagggcgacttgttcgcgctcaccgaggacgac
ctgctgcgcaccgagctgttccggaccaaggccggcacgttgtccgccaacggcacacgg
ctactgcagaacctgcagaaggcgaaaaaggctgcgctgtggcgtgttttggtggcgttg
tcgatccggcacgtggggccgacggcggcgcgcgccctggcgaccgagttcggcgatctg
gactcgataatgtcggcgtccaccgagcggctcgccgcggtggagggggtcggcccgacg
atcgcagcggcgctcaccgaatggttcaccgtcgactggcaccgcgcgatcgtggacaag
tggcgggccgccggcgtgcggatggccgacgagcgcccctccagcgtgccgcgcacgctg
gaggggctgacggtggtggtcaccgggtcgctggccggtttctcccgcgacgacgccaag
gaggcgatcctggcgcgcggcggcagggccgccggttcggtgtcgaagaagaccgactac
gtggtggccggcgatgcgcccggctccaagtacgacaaggcggtcgagttcggcgtgccc
atcctggacgaggacggcttccgcaagctgctggccgagggcccgccagaaaccccggcg
gactga
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