Melampsora larici-populina: MELLADRAFT_74057
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Entry
MELLADRAFT_74057 CDS
T03138
Name
(RefSeq) hypothetical protein
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
mlr
Melampsora larici-populina
Pathway
mlr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mlr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
MELLADRAFT_74057
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mlr03041
]
MELLADRAFT_74057
Spliceosome [BR:
mlr03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
MELLADRAFT_74057
Complex C
U5 SnRNP specific factors
MELLADRAFT_74057
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
MMR_HSR1
EFG_III
SRPRB
Dynamin_N
Roc
DUF4747
Septin
Motif
Other DBs
NCBI-GeneID:
18932519
NCBI-ProteinID:
XP_007405064
JGI:
Mellp1_74057
UniProt:
F4R842
LinkDB
All DBs
Position
Unknown
AA seq
995 aa
AA seq
DB search
MDQYDEWGNYIGDLSDDSDSEGLGEKTSHAKLPSPSDFDSNPLGALPEPDDHALMEIDDI
GPSQAVVLHDDKKYYPLASELYGPDVETMVEEEDAQPLSEPIINPIKVRKFTILEKGADV
PETTFPKQFMLDLMSHSESVRNVAVVGHLHHGKTSLIDMLVHETHPFDWDTSKPLRYTDT
HILSQQRGISLKSSSMSFVLPNSKNKSFLVNMIDTPGHVNFLDEVTNSLRLVDGAILVVD
AVEGVLVTSEKIIRHLLQENIPIVLVVNKVDRLILELRLPPADAYYKLKHTIEEVNTIIS
SVNPDPKFRVSPELGNVGFASTEMGWCFNLTSFAKMYRDTYCQDKRDLFDIEEFGKRLWG
NVWYMPEEKKFVKKNKGSSVRSFDHFILEPLYKLYGQVLGSEQTELQETLSTLGIYLKPS
AYKLDVRPLLRIVLSQFFGPSTGLVDMIAAHIPDPRLSADSKLLTNYTGPLDSPIANHIR
ESDPKGPLIIQVTKLYPTHDAGEFRSFGRVLSGVARAGVKVKVLGEGYSVNDEEDMIEAT
IEKVFISESRYSIETSGVPAGNLCLLSGIDNSITKTATVIESSYASSGGAGEGESLYIFK
PIAHLTKSILKIAVEPLNPSELPKLLEGLRKVNKTYPLVEIKVEESGEHVVIGTGEIYLD
CCLFDLREIFSEIEIKVSDPVVKFCETVVDTSVIRCYAETPNKKNKLTMIAEPLERGIAE
DIESGRINIRMPPKTLSQHFMGTYQWDLLSSRSIWAFGPEEEGGGTNILMNDTLPTEVDR
ILLSSVKESVKQGFQWGTREGPICDEPIRNVKFRLLDATLADEPIYRGGGQIIPTARRVC
YSSFMMATPRLMEPVYYIEVQAPADCVPAVYAVLARRRGHVTQDIPKPGSPLYTVKAYIP
VIDANGFETDLRTHTQGQSFCLQTFDHWSIVPGDPTDKSIVLRPLEPASAQALARDMALK
TRRRKGLGDNMSVAKYIEADLVSALIAAGQEDLLG
NT seq
2988 nt
NT seq
+upstream
nt +downstream
nt
atggatcagtacgatgagtggggaaactacattggtgacttgtctgacgactcggattca
gaaggacttggggagaagacctcacacgcgaagctgccttcacccagtgactttgactcg
aatcctctcggcgcgctgcctgaacctgatgaccatgcattgatggagatcgacgatatt
ggaccaagtcaagctgtagtactccatgacgacaaaaaatattaccccttggcttccgag
ctttatggtccagatgttgagactatggttgaagaggaagatgcacaacctttgagcgag
cctatcatcaatccaatcaaagttcgaaaattcacaatattggaaaagggagctgatgtt
cccgagacaacgtttccaaaacaattcatgttggacctgatgagtcattctgaatccgtt
cgaaacgtggccgttgttggtcatttgcatcacggtaagacgtcattgattgacatgttg
gttcatgaaactcatccatttgattgggatacaagcaaacctttacgttacaccgacacc
catatcttgtctcaacaaagaggaatttcattgaagtcttcatccatgtcatttgtgctg
cccaactcgaaaaataaatcattcctagtcaacatgattgatactcccggccacgtcaac
tttctagatgaagtgactaactcattacgactggtagatggtgccatcctggtagtcgat
gctgtagaaggggtgttggtcacatcagaaaagattatcaggcatcttttacaagaaaac
attccgatcgtgttggtagtcaataaagtggatcgactgatattggagctacgtctcccc
ccagctgacgcctattataaattaaagcatactattgaggaagtcaatacaatcatctca
agtgtgaacccagatcctaaattccgtgtatctcccgagttagggaatgtaggttttgcc
tcaacggagatgggatggtgttttaatcttactagctttgctaagatgtaccgagataca
tattgtcaggacaaacgagacctttttgatattgaggaatttggtaaacgtctttgggga
aatgtatggtacatgccagaggagaagaagtttgtcaagaagaacaaaggatcgagtgta
cgatcgtttgatcattttattctagagcctctctacaagctctatggacaggttttaggc
tcggagcagacagagctgcaagaaactctttccactctcggaatctaccttaaaccctct
gcttacaaactcgacgttcggcctttacttcgaattgtcctatcccaattttttggaccc
tcgaccggtttggtggacatgattgctgcacatattccagatcctcgactttctgccgac
agcaaactcttgacgaattatactggtcctttggactcccccattgctaaccacattcga
gagagcgaccctaaaggccctctcatcattcaagtcacaaagctataccccactcatgat
gccggggaattcaggtcgttcggaagggtgctcagtggagtggcacgagctggtgtcaaa
gttaaagttttgggtgagggatactccgtcaatgatgaagaagacatgatagaagctaca
atcgaaaaggttttcatttcggaatctcgttattcgatcgagaccagtggagttcctgcc
ggaaacctctgtttgctatctggaattgataactcgataacaaaaacagctaccgtcatc
gaaagctcctacgcctcctcaggtggtgctggcgaaggggagagcctgtacatctttaag
ccgatcgcccatctcacaaagtctattctgaagattgctgttgaaccgcttaatccctcc
gaattaccgaaattgttggaagggttgagaaaagtcaataagacttatccattggttgag
atcaaagttgaagagtctggtgaacatgtggtgattggaacaggcgagatttatcttgat
tgttgtctgtttgatttacgtgagatcttttcagaaattgagatcaaagtgtcggatccg
gtagtcaaattttgtgagacagtagttgacacctctgtcatcaggtgttacgccgaaact
cctaacaaaaaaaacaaactgacgatgatcgcagagcccttagagcgagggattgcagaa
gatatcgaatctggtcgaatcaatatcaggatgccacctaaaacactgagtcagcatttc
atgggtacttatcaatgggatcttttatcctctcgctcgatttgggcatttggtcctgaa
gaagaaggcggcgggaccaacattttgatgaatgatacgctgcccaccgaggttgatcga
atcttgttgtcaagtgtgaaggagagtgtcaaacaagggtttcagtggggaacaagggag
ggccctatttgtgatgaaccaatccggaatgtcaagtttcgtcttttagacgccacccta
gctgacgagccaatctatcgaggaggtggtcagatcatcccaacagcaagacgtgtctgc
tattcttccttcatgatggcaactcctagactcatggaacctgtatattacatcgaagtg
caagctccagccgactgtgtgcctgctgtttatgcagttttggcgaggcgaagagggcat
gttacacaagatatccctaaacctggatcacctctctacacagtgaaagcgtacatacca
gtgatcgatgccaacggttttgaaaccgacctacgaacccatacccaaggacaaagtttc
tgcttacaaacatttgatcactggtccatagttcctggtgaccctaccgacaagtctatt
gttcttcgtcctttagaacccgcctctgcgcaagcattggcacgagatatggcattgaag
actcgtcggaggaaaggtcttggtgataatatgtcggtggccaagtacatcgaagcagat
ctcgtttcagctttaattgcagctggtcaagaagatctgctaggttga
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integrated database retrieval system
