Melampsora larici-populina: MELLADRAFT_93120
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Entry
MELLADRAFT_93120 CDS
T03138
Name
(RefSeq) hypothetical protein
KO
K12608
CCR4-NOT complex subunit CAF16
Organism
mlr
Melampsora larici-populina
Pathway
mlr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mlr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MELLADRAFT_93120
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mlr03019
]
MELLADRAFT_93120
Messenger RNA biogenesis [BR:
mlr03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
MELLADRAFT_93120
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
AAA_21
AAA_29
AAA_25
NACHT
AAA_28
AAA_15
PduV-EutP
MMR_HSR1
RsgA_GTPase
AAA_23
AAA_33
Arf
AAA_16
Roc
nSTAND3
G-alpha
Motif
Other DBs
NCBI-GeneID:
18936478
NCBI-ProteinID:
XP_007416073
JGI:
Mellp1_93120
UniProt:
F4S401
LinkDB
All DBs
Position
Unknown
AA seq
311 aa
AA seq
DB search
MQPSSSPTTPAIDVTDLHFRFNEGLPEILRGIDLKLTPGSRCLLIGANGAGKSTLLQILA
GKRLTKSKAKVLGQDVFFNTPEIVQLMLPFLQGVTYLGTEWASNPVVRSDLIVSHFLDSV
GGYRHKARRDRLLDILDVDLDWHMHELSDGERRRVQIVQGLMAPWSLLLLDEVTVDLDVM
VRQELLEFLVEDTVKRGCTVLYATHIFDGLDTFPTHVCHLQLGATVAPIAQEWPLDPNNP
KHVVDIPTEIIQKMLDPNRIGSKLLILALHWLTEDRKIRLALEAEGRAGFRKRGAKDGMV
PSDSEAFYRNS
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atgcaaccttcatcatcaccaaccacacctgctatagatgtcactgaccttcatttcaga
ttcaatgaaggattacctgaaatcctacgaggtattgatctcaaattgacacctggatcg
aggtgtctcctgatcggtgcgaatggagctggtaaatccacgttactacagatcttggca
ggtaaacgattgaccaaatcaaaggccaaggtcttgggacaagatgtcttctttaataca
ccagagatcgttcaacttatgctccctttcctacagggcgtgacttatcttgggactgaa
tgggccagcaatccggttgtgagatctgatctcattgtatcacactttctagattcggtt
ggtggctacagacacaaggctcgccgagatcggcttctggacattctcgatgtcgatttg
gattggcatatgcacgagctcagcgatggtgaaaggagacgagttcagattgtacaaggc
ttgatggctccttggtccttactactactagatgaggttacggttgatctagacgtcatg
gtgcgacaggaattgctcgaattccttgtcgaagatactgtcaaaaggggatgcacagta
ctctatgctacccacattttcgatggattagatacgtttcctacgcatgtatgtcacttg
caattaggggccactgtggctcctattgcccaagaatggccccttgatcccaataatccg
aaacacgttgtggatattccaacggagatcattcaaaagatgttggatcccaatcgaata
ggatcaaaattattaatacttgcgttgcattggcttaccgaagatcgtaagattcgactt
gcacttgaagcggaaggtcgggctggtttcagaaagcgaggtgccaaggatggtatggta
ccaagtgactcagaggccttttacagaaacagctag
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