Micrococcus luteus: Mlut_05940
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Entry
Mlut_05940 CDS
T00918
Name
(GenBank) DNA ligase, NAD-dependent
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
mlu
Micrococcus luteus
Pathway
mlu03030
DNA replication
mlu03410
Base excision repair
mlu03420
Nucleotide excision repair
mlu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mlu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Mlut_05940
03410 Base excision repair
Mlut_05940
03420 Nucleotide excision repair
Mlut_05940
03430 Mismatch repair
Mlut_05940
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mlu03032
]
Mlut_05940
03400 DNA repair and recombination proteins [BR:
mlu03400
]
Mlut_05940
Enzymes [BR:
mlu01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
Mlut_05940
DNA replication proteins [BR:
mlu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
Mlut_05940
DNA repair and recombination proteins [BR:
mlu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
Mlut_05940
NER (nucleotide excision repair)
GGR (global genome repair) factors
Mlut_05940
MMR (mismatch excision repair)
DNA ligase
Mlut_05940
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Mlut_05940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
BRCT
DNA_ligase_ZBD
HHH_5
Nlig-Ia
PTCB-BRCT
Auto_anti-p27
RNA_ligase
Motif
Other DBs
NCBI-ProteinID:
ACS30131
UniProt:
C5C9H9
LinkDB
All DBs
Position
651276..653669
Genome browser
AA seq
797 aa
AA seq
DB search
MSTPKESAAQPDPQDIPAADLREEYEDLVERVRAARTAYYQRDAPEISDAEYDALYRRLE
DLEALHPELVSNDSPTQEVGGEVSEAFAPVRHGARMYSLEDVFSVEELEVWFRRAAQALT
QVRPGVAPRWLVEVKIDGLAVALRYRDGRLVQAATRGDGVTGEDVTANVRTIGDIPHELS
GEGWPAEFEVRGEVFMSSAAFAELNARRAEEGQPPFANPRNAAAGALRQKDPAVTAQRPL
AMFVHGIGSVEAFGLESQHEAYDALASWGLPVSPYTRRVEGADEEALAAVVAVIEEYGRR
RHELIHEIDGIVLKADAFADQRYLGHTSRVPRWAAAYKYPPEEVHTLLRDIAVSVGRTGR
VTPFAVLEPVTVAGSTVSLATLHNQDVVKAKGVLIGDTVVVRKAGDVIPEVVGPVLPLRE
KAIEAGRELREFVMPAHCPSCGTPLAPAKEGDVDLRCPNARSCPAQLAGRVEHLASRGAF
DVEALGEEAARWLVQGPGEDPAEHEGHVRPEGPGPITAEAQIFDLASGTPEAITGPRGED
GLTDLQRSLGAVRVWREGRTKVDGRMVPSGVFTLKPYFFTAGTAKRPSAPTANTLRLFDE
LEKAKSQPLWRTLVALSIRHVGPTAARSLATAFGSMTALRAAAEAGDRDRLAEIDGVGPI
IADALIEWFAEDWHREIVDRWTAAGVAMEDEQDESTPRTLEGLTVVVTGSLEGFSRDSAK
EAILVRGGKASGSVSKKTDFLVAGEAAGSKLDKAQSLGVPVLDEAEFTALLAGGPDAVRP
ADTDDATDGAADGEASA
NT seq
2394 nt
NT seq
+upstream
nt +downstream
nt
gtgagcacccccaaggaatccgccgcccagcccgatccgcaggacatccccgccgcggac
ctgcgggaggagtatgaggacctcgtggagcgggtccgcgccgcccggaccgcctactac
cagcgggacgccccggagatctcggacgccgagtacgacgcgctgtaccgccgtctcgag
gacctcgaggccctgcaccccgagctcgtgtccaacgactcgcccacccaggaggtcggg
ggggaggtctcggaggcgttcgccccggtccggcacggggcccgcatgtactcgctcgag
gacgtgttctccgtcgaggagctcgaggtctggttccgccgcgcggcgcaggccctgacg
caggtgcggccgggcgtggcgccccgctggctcgtggaggtgaagatcgacgggctcgcc
gtcgcgctgcgctaccgggacgggcggctcgtgcaggccgccacccgcggcgacggcgtc
acgggcgaggacgtcaccgccaacgtgcgcaccatcggggacatcccgcacgagctctcc
ggcgagggctggcccgccgagttcgaggtgcgcggcgaggtcttcatgtcctccgccgcc
ttcgccgagctcaacgcgcgccgtgccgaggagggtcagccgccgttcgcgaacccgcgc
aacgccgccgctggcgccctgcgtcagaaggacccggccgtcaccgcgcagcgcccgctg
gccatgttcgtgcacggcatcggctctgtcgaggcgttcggactggagtcccagcacgag
gcgtacgacgcgctcgcgagctggggcctgcccgtcagcccctacacccgccgggtggag
ggcgcggacgaggaggcgttggccgccgtcgtcgcggtgatcgaggagtacggccggcgc
cggcacgagctgatccacgagatcgacggcatcgtgctgaaggcggacgcgttcgcggac
cagcgctacctcggccacacctcccgcgtgccccgctgggccgcggcgtacaagtacccg
ccggaggaggtgcacacgctgctgcgggacatcgcggtctcggtgggccgcaccggacgg
gtgaccccgttcgcggtgttggagccggtcaccgtggccgggtccaccgtctccctggcc
accctgcacaaccaggacgtggtcaaggccaagggcgtgttgatcggggacaccgtggtg
gtgcggaaggccggggacgtgatccccgaggtcgtgggccctgtgctgccgctgcgcgag
aaggcgatcgaggcgggccgggagctgcgcgagttcgtcatgcccgcgcactgcccctcg
tgcggcacgccgctggccccggccaaggagggggacgtggacctgcgctgccccaacgcc
cgctcctgcccggcccagctggccggccgcgtcgagcacctggccagccgcggcgcgttc
gacgtggaggcgctcggcgaggaggcggcccgctggctcgtccagggccccggggaggac
ccggccgagcacgagggacacgtgcggcccgagggcccgggccccatcacggcggaggcg
cagatcttcgacctcgcctccggcacaccggaggcgatcacgggcccccgcggcgaggac
gggttgacggacctgcagcgctccctcggcgcggtgcgcgtgtggcgcgagggccgcacg
aaggtggacggccgcatggtgccctcgggcgtgttcacgctcaagccgtacttcttcacc
gccggcaccgcgaagaggccgtccgcgcccacggccaacacgctgcgcctgttcgacgag
ctcgagaaggccaagtcccagccgctctggcgcaccctcgtggcgctgtccatccggcac
gtgggcccgacggcggcccgctcgctggccacggcgttcggctcgatgacggcgctgcgc
gcggcggccgaggccggcgaccgggaccggctggccgagatcgacggcgtcggcccgatc
atcgcggacgcgctcatcgagtggttcgccgaggactggcaccgggagatcgtggaccgc
tggaccgcggcgggtgtggccatggaggacgagcaggacgagtccaccccgcgcacgctc
gagggcctgacggtggtggtcaccggctcgctcgagggcttctcccgtgactccgcgaag
gaggcgatcctcgtgcgcggcggcaaggcctccgggtccgtgtccaagaagaccgacttc
ttggtggccggcgaggccgccggctccaaactggacaaggcgcagtccctcggcgtgccc
gtgctggacgaggccgagttcacggcgctgctggccggcggcccggacgccgtgcgtccg
gcggacacggacgacgccaccgacggcgccgcagacggggaggcctcggcatga
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