Martelella lutilitoris: JET14_07135
Help
Entry
JET14_07135 CDS
T07693
Symbol
ligA
Name
(GenBank) NAD-dependent DNA ligase LigA
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
mlut
Martelella lutilitoris
Pathway
mlut03030
DNA replication
mlut03410
Base excision repair
mlut03420
Nucleotide excision repair
mlut03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mlut00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
JET14_07135 (ligA)
03410 Base excision repair
JET14_07135 (ligA)
03420 Nucleotide excision repair
JET14_07135 (ligA)
03430 Mismatch repair
JET14_07135 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mlut03032
]
JET14_07135 (ligA)
03400 DNA repair and recombination proteins [BR:
mlut03400
]
JET14_07135 (ligA)
Enzymes [BR:
mlut01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
JET14_07135 (ligA)
DNA replication proteins [BR:
mlut03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
JET14_07135 (ligA)
DNA repair and recombination proteins [BR:
mlut03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
JET14_07135 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
JET14_07135 (ligA)
MMR (mismatch excision repair)
DNA ligase
JET14_07135 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
JET14_07135 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
BRCT
DNA_ligase_ZBD
PTCB-BRCT
Nlig-Ia
HHH_5
RUBY_RBDX
Motif
Other DBs
NCBI-ProteinID:
QQM31929
UniProt:
A0A7T7HMF2
LinkDB
All DBs
Position
1518588..1520741
Genome browser
AA seq
717 aa
AA seq
DB search
MAKDKVPTDKMTREEAEAELAFLAEEIARHDAAYHGKDAPEITDAEYDALKHRNDEIEAR
FPDLVREDSPSARVGSAPSEVFAPVTHSVSMLSLGNVFSDEDVQDFIASVYRFLGQLPDG
SIAFTAEPKIDGLSMSLRYENGRLISGATRGDGTTGENVTANVRTISEIPNRLPDGAPEI
VEVRGEIYMAKSDFAALNAALSEAGEKTYVNPRNTASGSLRQLDPKVTEKRKLRFFAYAW
GEMSEMPADTQMGMVGTFEEWGFPVNPLMKRLSSVDDLLAHYHEIGVKRGDLDYDIDGVV
YKVDRLDLQARLGFRSRSPRWATAHKFPAEQAITRLIAIDIQVGRTGALTPVARLEPITV
GGVVVTNATLHNEDYIAGKGSNGEPIREGRDIRVGDYVIVQRAGDVIPQIVDILPEKRPE
DATPYEFPDHCPVCGAHAVRDINEKSGKVDAVRRCTAGFSCRAQAVEHLKHFVSRNAFDI
EGLGSKQVDFFFEHEDPGLAIRTAPDIFTLERRQAEALTKLENFNGWGKTSVANLFQSIN
GRREIALPRFIFALGIRHVGETTAKLLARSYGSYAAFEQAMREAAAGEGDAWDDLNNIDG
IGAVVARALVDFFAEEQNVAVIARLLEDVTPLDDAQKIDTTSPVAGKTVVFTGSLEKMTR
DEAKAKAESLGAKVSGSVSKKTDIVVAGPGAGSKLKKAEELGVQTMDEDEWLALIGG
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaagacaaggtcccgaccgacaagatgacccgggaagaggccgaggcggaactc
gcttttctggcggaggaaattgcccgccatgacgctgcctatcacggcaaggacgcgccc
gagatcacggacgccgaatatgacgcgctgaaacatcgcaatgatgaaatcgaggcgcgc
tttcccgatctcgtgcgtgaagacagcccctcggcccgcgtcggctccgcgccctcggag
gtcttcgcgcctgtcacccattccgtgtcgatgctctcgctcggcaacgtgttttccgac
gaggacgtgcaggacttcatcgcctcggtctatcgctttctcggccagttgccggacggc
tcgatcgcctttaccgccgagcccaagatcgacgggttgtcgatgtcgctgcgctatgaa
aacggtcgcctgatctccggcgcgacgcgcggcgacggcaccacgggcgagaacgtgaca
gccaatgtccgcaccatttccgaaatcccgaaccgcctgccggacggcgcgccggagatc
gtcgaggtgcgcggcgagatctatatggcgaagagcgattttgccgcgctcaacgccgcg
ctctccgaggctggagagaagacctatgtgaacccgcgcaataccgcgtccggttcgctg
cgtcagctcgacccgaaggtgacggaaaagcggaaactcagattcttcgcctatgcctgg
ggcgagatgtcggagatgccggccgatacccagatgggcatggtcgggacgttcgaagaa
tgggggtttccggtcaaccccctgatgaagcggctctcctccgtcgatgacctgctggcg
cactatcacgagatcggcgtcaagcgcggggacctcgattatgatatcgacggcgtggtc
tacaaggtcgaccggctcgaccttcaggcgcggctcggtttccgctcgcgctcgccgcgc
tgggcgacagcgcataaattccccgccgagcaggcgatcacccggctcatcgccatcgac
attcaggtgggccgcacgggcgcgctgacgccggtggccaggcttgagccgatcaccgtc
ggcggtgttgtcgtcaccaatgcgacactgcacaacgaggactatatcgccggcaagggc
tcgaacggcgagccgattcgcgagggccgcgatattcgcgtcggcgattatgtgatcgtc
cagcgggccggcgacgtcatcccgcagatcgtcgatatcctgccggaaaaacggccggag
gatgcgacaccttacgaatttcccgaccactgcccggtatgcggcgcccatgcggtgcgc
gacatcaatgagaagagcggcaaggtggacgccgtgcgccgctgtacggccggtttttcc
tgccgggcgcaggccgtcgagcatctgaagcatttcgtctcgcgcaatgccttcgatatc
gaggggctcggcagcaagcaggtcgatttcttcttcgagcatgaggacccggggcttgcg
atccgcacggcgcccgacatcttcacgctcgaaagacgccaggccgaggcgctgacgaaa
ctcgagaatttcaacggttggggcaaaacctcggtcgccaacctgttccagtcgatcaat
ggacgccgcgagatcgcgctgccgcgcttcatctttgcgctcggcatccgccatgtcggc
gagacgacggcgaagcttctggcccgctcctatggctcctacgccgccttcgaacaggcg
atgcgggaggcggcagcaggcgagggggatgcctgggacgatctcaacaatatcgacggc
atcggagccgtggttgcccgcgcgctggtcgacttctttgccgaagaacagaacgttgcc
gtgatcgcccgtctgctggaagacgtgacgccgcttgacgatgcgcagaagattgacacg
accagtcccgtcgccggcaagacggtggtctttaccggcagcctcgagaagatgacccgc
gacgaggccaaggccaaggcggaaagcctcggggccaaggtttccggctcggtatcgaaa
aagacggatatcgtcgtcgccggccccggcgcgggttccaagctgaagaaggcggaggag
ctcggcgtgcagaccatggacgaggatgaatggctggcgctgatcggcgggtga
DBGET
integrated database retrieval system
