Microbacterium lemovicicum: CVS47_01618
Help
Entry
CVS47_01618 CDS
T06301
Symbol
ligA
Name
(GenBank) DNA ligase A
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
mlv
Microbacterium lemovicicum
Pathway
mlv03030
DNA replication
mlv03410
Base excision repair
mlv03420
Nucleotide excision repair
mlv03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mlv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CVS47_01618 (ligA)
03410 Base excision repair
CVS47_01618 (ligA)
03420 Nucleotide excision repair
CVS47_01618 (ligA)
03430 Mismatch repair
CVS47_01618 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mlv03032
]
CVS47_01618 (ligA)
03400 DNA repair and recombination proteins [BR:
mlv03400
]
CVS47_01618 (ligA)
Enzymes [BR:
mlv01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
CVS47_01618 (ligA)
DNA replication proteins [BR:
mlv03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
CVS47_01618 (ligA)
DNA repair and recombination proteins [BR:
mlv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
CVS47_01618 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CVS47_01618 (ligA)
MMR (mismatch excision repair)
DNA ligase
CVS47_01618 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
CVS47_01618 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
DNA_ligase_ZBD
HHH_5
BRCT
HHH
Nlig-Ia
PTCB-BRCT
Motif
Other DBs
NCBI-ProteinID:
AZS36993
UniProt:
A0A3S9WAV1
LinkDB
All DBs
Position
complement(1724465..1726858)
Genome browser
AA seq
797 aa
AA seq
DB search
MTDAELPTGLSREDARAEVQSLIDQITGARDAYYGRDAELVDDATYDGWMRRLEALERAF
PELQGQDSPTQTVGAAQASMFAPITHAERMLSLDNVFSPDELAEWCAKAQASSGRTVRWL
TELKIDGLALNLRYENGVLTSAATRGDGRVGEDVTANAVRVAGIPERLSGSGHPPLVEVR
GEVFIPVAAFERLNALQAALRDRVVEEARARGRAFDEAKSTLSAERRFPAFANPRNAASG
GLRQQLEKKDGLELEAGQARLDSLRMYVHGVGAWENPPVSSQSEIYALLDGWGLPTSPHF
RTADDIDGVLDFVAHYGEHRHEVEHEIDGVVVKVDELALHDELGSTSRAPRWAIAYKYPP
EQVNTKLLDIVVSVGRTGRATPFAVMAPARVAGSVVRQATLHNQDIVKAKGVLIGDTVVL
RKAGDVIPEVLGPVVELRDGTERAFVMPTHCPECGFELAPAKEGDIDLRCPNTRSCPAQV
RGRVEHIGSRGALDIEALGEVTAAALTQPSVPEEPPLETEAGLFDLTLEQLIPIEVVVRD
AETGEPRVDDATGLPVRRAPFRRNASAAEKKAGVTGAQPSVQAVRLIEELEKAKTKDLWR
YLVAMNVRHVGPVAARALAQWFGSVEAIRAASRDELAAVEGVGGIIADALVDWFEVDWHR
DIIDRWSAAGVRLGTPGHPGPGGAVVQGGVLEGITVVATGSLEGYSREGAQEAILAAGGK
AASSVSKKTDFVAAGPGAGSKLGKAEALGVRIIDAAQFRLLVTEGPGALPDPEETIEEDT
DEPAVSDAVRPGTIEEG
NT seq
2394 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgacgcggagcttcccaccggactgtcgcgcgaggatgcccgcgccgaagtgcag
tcgctcatcgaccagatcacgggtgcgcgcgacgcgtactacggccgtgacgccgagctc
gtcgacgacgcgacctacgacgggtggatgcgacggctcgaggccctcgaacgggcgttc
cccgagctgcagggtcaggactcgccgacccagacggtcggcgccgcccaggcgtcgatg
ttcgcgccgatcacgcacgccgagcggatgctgagcctcgacaacgtcttctcgcccgac
gagctggccgagtggtgcgcgaaggcccaggcgtcgtcgggccggaccgtccgatggctc
accgagctgaagatcgacgggctcgccctcaatctccgctacgagaacggcgtgctcacc
tccgccgcgacgcgcggcgacgggcgggtcggcgaagacgtgaccgccaacgccgtgcgc
gttgcgggcatccccgaacggctgtcgggcagcggccacccgccgctggtcgaggtccgc
ggcgaggtgttcatccccgtggcggcgttcgagcggctcaacgccctccaggcggcgctc
cgcgaccgcgtcgtagaggaggcgcgtgcacgcgggcgcgccttcgacgaggcgaagtcg
acgctcagcgccgagcggcggttcccggcgttcgcgaatccgcggaacgccgccagcggc
ggcctgcgacagcagctggagaagaaggacggactggagctcgaagccggtcaggcacgc
ctcgactcgctgcgcatgtacgtccacggtgtcggcgcgtgggagaacccgcccgtgtcc
tcgcagagcgagatctacgcgctgctggacgggtggggacttccgaccagcccgcacttc
cgcaccgccgacgacatcgacggcgtcctcgacttcgtcgcgcactacggcgagcaccgg
cacgaggtcgagcacgagatcgacggcgtcgtggtcaaggtcgacgagctcgccctgcac
gacgagctcggatccacgagccgcgccccgcggtgggcgatcgcctacaagtacccgccc
gagcaggtcaacacgaagctcctcgacatcgtcgtctcggtcggccgcaccggacgcgcg
acgccgttcgccgtgatggcccccgcccgcgtcgccggctcggtcgtgcgccaggccacc
ctgcacaaccaggacatcgtgaaggccaagggcgtgctgatcggcgacaccgtcgtgctg
cgcaaggccggtgacgtgatcccggaggtgctcggtcccgtggtcgagctgcgcgacggc
accgagcgcgcattcgtgatgccgacgcactgtccagagtgcggcttcgagctcgcgccc
gcgaaggagggcgacatcgacctgcgctgcccgaacacgcggtcctgcccggcgcaggtg
cgcggacgggtcgagcacatcggctcccgcggcgcgctcgacatcgaggcgctcggcgag
gtgaccgcggccgcgctgacgcagccgtccgtgcccgaggagcctcccctcgagaccgag
gcaggtctgttcgacctcaccctggagcagctgatcccgatcgaggtcgtcgtccgcgac
gccgagacgggcgagccgcgggtcgatgacgcgaccggcctgcccgtccgtcgcgccccg
ttccggcgcaacgcgtcggccgcggagaagaaggcgggcgtgacgggcgcgcagccctcg
gtgcaggccgtgcgtctcatcgaggagctcgagaaggccaagacgaaagacctgtggcgc
tacctcgtcgcgatgaacgtccgccacgtcggtccggtcgccgcccgcgcactggcgcag
tggttcggctcggtcgaggcgatccgcgccgcctcccgagacgagctggccgcggtggag
ggtgtgggcggcatcatcgccgacgccctcgtcgactggttcgaggtcgactggcaccgc
gacatcatcgaccgctggagtgccgcgggcgtgcgcctcggcacgccggggcacccgggg
cccggcggcgccgtggttcagggtggggtactggagggcatcacggtcgtcgcgaccgga
tcactggagggctattcccgcgagggagctcaggaggcgatcctggccgccggcgggaag
gcggcttcaagcgtgtcgaagaagacggacttcgtcgccgccgggccgggcgcgggctcc
aagctcggcaaggccgaggcgctcggcgtgcgcatcatcgacgccgcccagttccggctt
ctggtcaccgaaggccccggagcgctgcccgacccggaggaaacgatcgaggaagatacg
gacgaaccggcggtgtccgatgccgtccggcccggcacgatcgaggaagggtga
DBGET
integrated database retrieval system
