Mycobacterium lentiflavum: MJO58_08455
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Entry
MJO58_08455 CDS
T08800
Symbol
ligA
Name
(GenBank) NAD-dependent DNA ligase LigA
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
mlw
Mycobacterium lentiflavum
Pathway
mlw03030
DNA replication
mlw03410
Base excision repair
mlw03420
Nucleotide excision repair
mlw03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mlw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MJO58_08455 (ligA)
03410 Base excision repair
MJO58_08455 (ligA)
03420 Nucleotide excision repair
MJO58_08455 (ligA)
03430 Mismatch repair
MJO58_08455 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mlw03032
]
MJO58_08455 (ligA)
03400 DNA repair and recombination proteins [BR:
mlw03400
]
MJO58_08455 (ligA)
Enzymes [BR:
mlw01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
MJO58_08455 (ligA)
DNA replication proteins [BR:
mlw03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
MJO58_08455 (ligA)
DNA repair and recombination proteins [BR:
mlw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
MJO58_08455 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MJO58_08455 (ligA)
MMR (mismatch excision repair)
DNA ligase
MJO58_08455 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
MJO58_08455 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
BRCT
DNA_ligase_ZBD
HHH_5
PTCB-BRCT
Nlig-Ia
HHH
BRCT_2
UPF0758_N
HHH_8
ChpA-C
Motif
Other DBs
NCBI-ProteinID:
ULP43957
LinkDB
All DBs
Position
1739176..1741272
Genome browser
AA seq
698 aa
AA seq
DB search
MSSPEADPVPPEVRRQWRELADEVREHQFRYYVRDAPVISDADFDDLLKRLGALEEQYPE
LRTPDSPTQLVGGAGFATDFTPAEHLERMLSLDNVFSTEEFDGWAARVHAEVGLPGSQDV
PFLCELKIDGVALALVYRGGRLVRAATRGDGRTGEDVTNNARTIEDVPERLTASGEYPIP
DVLEVRGEVFFRVADFEALNAALVEDGKVPFANPRNSAAGSLRQKDPAVTARRKLRMICH
GVGHAEGFRPASLHDAYLALGAWGLPVSGHTARVPNVDGALERIAYWGEHRHDVDHEIDG
VVVKVDDFALQRRLGSTSRAPRWAIAYKYPPQEVQTKLLDIRVNVGRTGRVTPFAVMVPV
KVAGSTVEMATLHNAAEVKRKGVLIGDTVVIRKAGDVIPEVLGPVADLRDGTEREFVMPT
HCPECGTELAPAKEGDADIRCPNSRSCPAQLRERVFHVAGRGAFDIEGLGYEAAIALLAA
EVITDEGDLFTLTEDDLLRTELFTTKAGTLSANGKRLLANLDKAKAQPLWRVLVALSIRH
VGPTAARALATEFGSLDAITSASTEELAAVEGVGPTIAAAVTEWFTVDWHRAIVDKWRAA
GVRMADERDASTPRTLAGLSIVVTGSLNGFSRDEAKEAIVARGGKAAGSVSKNTAYVVAG
DSPGSKYDKAVELGVPILDEDGFRRLLADGPTADSTPD
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
gtgagttcgccagaagctgacccggtgccgcccgaggttcggcgtcaatggcgtgagctg
gccgacgaggtgcgtgagcaccagttccgctactacgtgcgcgatgcgccggtcatctcc
gacgccgatttcgacgacctcctcaagcggctgggcgctctcgaggagcagtatcccgag
ctgcgcacgcccgattcgccgacgcagctggtcggcggcgcgggatttgccaccgacttc
accccggccgagcacctggaacggatgctgtcgctggacaacgtgttcagcaccgaggag
ttcgacgggtgggccgcccgcgtccacgccgaggtgggcctccccggttcgcaagacgtg
cccttcctgtgcgagctcaagatcgacggcgtcgcgctggctctggtgtaccgcggtggc
cggctggtccgcgctgccacccgcggtgacggccgcaccggcgaggacgtcacgaacaac
gcgcgcaccatcgaggatgtcccggaacggctgacggccagcggcgagtatccgatcccc
gacgtcctcgaggtccgcggcgaggtgttcttccgggtcgccgacttcgaggcgctcaac
gccgcgctggtcgaggacggcaaggtcccgttcgccaacccgcgcaacagcgccgcggga
tcgctgcgccagaaggatcccgcggtcaccgctcgccgcaagctgcggatgatctgccac
ggcgtcgggcacgccgaggggtttcggccggccagcctgcacgacgcctacctggcactc
ggcgcctggggactgcccgtctccggccacaccgcccgggtccccaacgtcgacggtgcg
ctggagcggatcgcctattggggcgagcaccgccacgacgtcgatcacgaaatcgacggt
gtcgtggtcaaagtcgacgacttcgcactgcagcgcaggctggggtcgacctcgcgagcg
ccgcgttgggcgatcgcgtacaagtacccgccgcaagaggtgcaaaccaagctactcgat
atccgggtgaacgtcgggcggaccggacgcgtcacaccgttcgcggtcatggtgccggtc
aaggtcgcgggttcgacggtcgaaatggccaccctgcacaacgccgccgaggtcaagcgc
aagggcgtgctgatcggcgacaccgtggtgatccgcaaggccggcgacgtgattcccgaa
gtgctcggcccggtcgccgatctgcgcgacggcaccgaacgcgaattcgtgatgcccacg
cactgtcccgaatgcggcaccgagctggccccggccaaggagggcgacgccgacatccgc
tgccccaactcccgatcctgcccagcgcagttgcgggagagagtatttcacgtcgccggc
cgcggcgccttcgacatcgaagggcttggctacgaggccgctatcgcgttgctggccgcc
gaggtgatcaccgacgagggagacctgttcaccctcaccgaagacgaccttttgcgcacc
gaactgttcaccaccaaggccggcacactgtcggctaacggtaagcggctgctggccaac
ctcgacaaggccaaggcgcaaccgctgtggcgagtgctggtggcgctgtcgatccggcac
gtcggcccgaccgccgcgcgtgccctggcaaccgaattcggcagcctcgacgcgatcacg
tcggcgtcgaccgaggagctggccgcggtcgagggcgtcgggccgaccatcgccgccgcg
gtcaccgaatggttcaccgtcgactggcaccgcgcgatcgtcgacaagtggcgggcggcc
ggcgtgcggatggccgacgagcgcgacgcgagcacgccgcgcacgctggccgggctgagc
atcgtggtcaccgggtcgctgaacgggttctcgcgcgacgaggccaaggaggcgatcgtg
gcccgtggcggcaaggccgcgggttcggtgtcgaagaacaccgcctacgtcgtggcgggt
gattcgccggggtcgaagtacgacaaggcggtcgagctgggcgtgccgatcctcgacgag
gacggctttcgccgcctgctggccgacgggccgacggccgacagcacacccgattaa
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