KEGG   PATHWAY: mlx03060
Entry
mlx03060                    Pathway                                
Name
Protein export - Mirounga leonina (Southern elephant seal)
Description
The protein export is the active transport of proteins from the cytoplasm to the exterior of the cell, or to the periplasmic compartment in Gram-negative bacteria. The sec dependent pathway is the general protein export system that transports newly synthesized proteins into or across the cell membrane. The translocation channel is formed from a conserved trimeric membrane protein complex, called the Sec61/SecY complex. The twin-arginine translocation (Tat) pathway is another protein transport system that transports folded proteins in bacteria, archaea, and chloroplasts. Many Tat systems comprise three functionally different membrane proteins, TatA, TatB, and TatC, but TatA and TatE seem to have overlapping functions, with TatA having by far the more important role.
Class
Genetic Information Processing; Folding, sorting and degradation
Pathway map
mlx03060  Protein export
mlx03060

Other DBs
GO: 0043952 0043953
Organism
Mirounga leonina (Southern elephant seal) [GN:mlx]
Gene
117999268  GET4; Golgi to ER traffic protein 4 homolog isoform X1 [KO:K23387]
118001568  SEC63; translocation protein SEC63 homolog isoform X1 [KO:K09540]
118001593  [KO:K03104]
118002827  [KO:K03106] [EC:3.6.5.4]
118002869  [KO:K03106] [EC:3.6.5.4]
118003360  SRP14; signal recognition particle 14 kDa protein isoform X1 [KO:K03104]
118003675  OXA1L; mitochondrial inner membrane protein OXA1L [KO:K03217]
118003911  SPCS2; signal peptidase complex subunit 2 [KO:K12947] [EC:3.4.-.-]
118004437  SEC11C; signal peptidase complex catalytic subunit SEC11C [KO:K13280] [EC:3.4.21.89]
118004893  SEC61A1; protein transport protein Sec61 subunit alpha [KO:K10956]
118005084  SPCS1; signal peptidase complex subunit 1 [KO:K12946] [EC:3.4.-.-]
118005195  GET3; ATPase GET3 [KO:K01551] [EC:7.3.2.7 7.3.-.-]
118005537  SGTA; small glutamine-rich tetratricopeptide repeat-containing protein alpha [KO:K16365]
118006105  SEC62; translocation protein SEC62 [KO:K12275]
118010095  SPCS3; signal peptidase complex subunit 3 [KO:K12948] [EC:3.4.-.-]
118010504  SRP72; signal recognition particle subunit SRP72 [KO:K03108]
118013011  SRP9; signal recognition particle 9 kDa protein [KO:K03109]
118013117  [KO:K03109]
118013381  SRPRA; signal recognition particle receptor subunit alpha [KO:K13431]
118014506  UBL4A; ubiquitin-like protein 4A [KO:K23388]
118015725  IMMP1L; mitochondrial inner membrane protease subunit 1 isoform X1 [KO:K09647] [EC:3.4.21.-]
118015899  [KO:K07342]
118017520  SRP19; signal recognition particle 19 kDa protein [KO:K03105]
118017681  HSPA5; endoplasmic reticulum chaperone BiP [KO:K09490] [EC:3.6.4.10]
118017898  SEC61B; protein transport protein Sec61 subunit beta [KO:K09481]
118020382  UBL4B; ubiquitin-like protein 4B [KO:K23388]
118020983  IMMP2L; mitochondrial inner membrane protease subunit 2 isoform X1 [KO:K09648] [EC:3.4.21.-]
118021582  SEC61A2; protein transport protein Sec61 subunit alpha isoform X1 [KO:K10956]
118023088  SEC11A; signal peptidase complex catalytic subunit SEC11A isoform X1 [KO:K13280] [EC:3.4.21.89]
118023680  TMEM208; transmembrane protein 208 isoform X1 [KO:K27164]
118024246  SRP68; signal recognition particle subunit SRP68 [KO:K03107]
118024534  SEC61G; protein transport protein Sec61 subunit gamma [KO:K07342]
118026141  GET1; guided entry of tail-anchored proteins factor 1 isoform X1 [KO:K22384]
118027338  BAG6; large proline-rich protein BAG6 isoform X1 [KO:K23390]
Reference
  Authors
Dalbey RE, Robinson C.
  Title
Protein translocation into and across the bacterial plasma membrane and the plant thylakoid membrane.
  Journal
Trends Biochem Sci 24:17-22 (1999)
DOI:10.1016/S0968-0004(98)01333-4
Reference
  Authors
Berks BC, Sargent F, Palmer T.
  Title
The Tat protein export pathway.
  Journal
Mol Microbiol 35:260-74 (2000)
DOI:10.1046/j.1365-2958.2000.01719.x
Reference
  Authors
Wexler M, Sargent F, Jack RL, Stanley NR, Bogsch EG, Robinson C, Berks BC, Palmer T.
  Title
TatD is a cytoplasmic protein with DNase activity. No requirement for TatD family proteins in sec-independent protein export.
  Journal
J Biol Chem 275:16717-22 (2000)
DOI:10.1074/jbc.M000800200
Reference
  Authors
Jongbloed JD, Martin U, Antelmann H, Hecker M, Tjalsma H, Venema G, Bron S, van Dijl JM, Muller J.
  Title
TatC is a specificity determinant for protein secretion via the twin-arginine translocation pathway.
  Journal
J Biol Chem 275:41350-7 (2000)
DOI:10.1074/jbc.M004887200
Reference
  Authors
Rapoport TA
  Title
Protein translocation across the eukaryotic endoplasmic reticulum and bacterial plasma membranes.
  Journal
Nature 450:663-9 (2007)
DOI:10.1038/nature06384
Reference
  Authors
Flower AM
  Title
The SecY translocation complex: convergence of genetics and structure.
  Journal
Trends Microbiol 15:203-10 (2007)
DOI:10.1016/j.tim.2007.03.001
Reference
  Authors
Osborne AR, Rapoport TA, van den Berg B
  Title
Protein translocation by the Sec61/SecY channel.
  Journal
Annu Rev Cell Dev Biol 21:529-50 (2005)
DOI:10.1146/annurev.cellbio.21.012704.133214
Reference
  Authors
Paetzel M, Karla A, Strynadka NC, Dalbey RE
  Title
Signal peptidases.
  Journal
Chem Rev 102:4549-80 (2002)
DOI:10.1021/cr010166y
Reference
  Authors
Paetzel M, Dalbey RE, Strynadka NC
  Title
The structure and mechanism of bacterial type I signal peptidases. A novel antibiotic target.
  Journal
Pharmacol Ther 87:27-49 (2000)
DOI:10.1016/S0163-7258(00)00064-4
Reference
  Authors
Ng SY, Chaban B, VanDyke DJ, Jarrell KF
  Title
Archaeal signal peptidases.
  Journal
Microbiology 153:305-14 (2007)
DOI:10.1099/mic.0.2006/003087-0
Reference
  Authors
Desvaux M, Hebraud M, Talon R, Henderson IR
  Title
Secretion and subcellular localizations of bacterial proteins: a semantic awareness issue.
  Journal
Trends Microbiol 17:139-45 (2009)
DOI:10.1016/j.tim.2009.01.004
Reference
  Authors
Nakatogawa H, Murakami A, Ito K
  Title
Control of SecA and SecM translation by protein secretion.
  Journal
Curr Opin Microbiol 7:145-50 (2004)
DOI:10.1016/j.mib.2004.01.001
KO pathway
ko03060   

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