Mirounga leonina (Southern elephant seal): 118000316
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Entry
118000316 CDS
T07472
Symbol
SETDB1
Name
(RefSeq) histone-lysine N-methyltransferase SETDB1 isoform X1
KO
K11421
[histone H3]-N6,N6-dimethyl-lysine9 N-methyltransferase [EC:
2.1.1.366
]
Organism
mlx
Mirounga leonina (Southern elephant seal)
Pathway
mlx00310
Lysine degradation
mlx01100
Metabolic pathways
mlx04550
Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:
mlx00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
118000316 (SETDB1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04550 Signaling pathways regulating pluripotency of stem cells
118000316 (SETDB1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mlx03036
]
118000316 (SETDB1)
Enzymes [BR:
mlx01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.366 [histone H3]-N6,N6-dimethyl-lysine9 N-methyltransferase
118000316 (SETDB1)
Chromosome and associated proteins [BR:
mlx03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
118000316 (SETDB1)
Heterochromatin formation proteins
Other heterochromatin formation proteins
118000316 (SETDB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF5604
Tudor_4
MBD
Tudor_5
SET
Pre-SET
Chromo_MORC2_6th
DUF4537
53-BP1_Tudor
Chromo
Motif
Other DBs
NCBI-GeneID:
118000316
NCBI-ProteinID:
XP_034845852
LinkDB
All DBs
Position
Unknown
AA seq
1297 aa
AA seq
DB search
MSSLPGCIGLDAATAAVESEEIAELQQAVVEELGISMEELRQFIDEELEKMDCVQQRKKQ
LAELETWVIQKESEVAHVDQLFDDASRAVTNCESLVKDFYSKLGLQYRDSSSEDEASRPT
EIIEIPDEDDDVLSIDSGDAGSRTPKDQKLREAMAALRKSAQDVQKFMDAVNKKSSSQDL
HKGTLSQMSGELSKDGDLIVSMRILGKKRTKTWHKGTLIAIQTVGPGKKYKVKFDNKGKS
LLSGNHIAYDYHPPADKLFVGSRVVAKYKDGNQVWLYAGIVAETPNVKNKLRFLIFFDDG
YASYVTQSELYPICRPLKKTWEDIEDISCRDFIEEYITAYPNRPMVLLKSGQLIKTEWEG
TWWKSRVEEVDGSLVRILFLDDKRCEWIYRGSTRLEPMFSMKTSSASALEKKQGGQLRTR
PNMGAVRSKGPVVQYTQDLTSTGTQFKPMEPPQPTAPPAPPAPPAPPAPPAPPQSPQAGD
NDSLESQLAQSRKQVAKKSTSFRPGSVGSGHSSPTSPALSENVPAGKPGSNQTYRSPLGS
TASAPAAPSAPPAPPAFHGMLERAPAEPSYRAPMEKLFYLPHVCSYTCLSRVRPMRSAQY
RGKNPLLVPLLYDFRRMTARRRVNRKMGFHVIYKTPCGLCLRTMQEIERYLFETGCDFLF
LEMFCLDPYVLVDRKFQPYKPFYYILDITYGKEDVPLSCVNEIDTTPPPQVAYSKERIPG
KGVFINTGPEFLVGCDCKDGCRDKSKCACHQLTIQATACTPGGQINPNSGYQYKRLEECL
PTGVYECNKRCKCDPNMCTNRLVQHGLQVRLQLFKTQNKGWGIRCLDDIAKGSFVCIYAG
KILTDDFADKEGLEMGDEYFANLDHIESVENFKEGYESDAPCSSDSSGVDLKDQEDGNSG
TEDPEESNDDSSDDNFCKDEDFSTSSVWRSYATRRQTRGQKENGLSETASKDSRPPDLGP
PHIPIPPAIPVGGCNPPSSEETPKNKVASWLSCNSVSEGGFADSDSRSSFKTSEGGEGRA
GGGRGEAEKASTSGLGFKDEGDIKQAKKEDPDDRNKTSIVTESARNYGYNPSPMKLEGLR
RPPSKTSMHQSRRLMASAQSNADDVLTLSSSTESEGESGTSRKPTTGQTSATAVDSDDIQ
TISSGSEADDFEDKKNMSGPTKRQVAVKSTRGFALKSTHGIAIKSTNMASVEKGESAPVR
KNTRQFYDGEESCYIIDAKLEGNLGRYLNHSCSPNLFVQNVFVDTHDLRFPWVAFFASKR
IRAGTELTWDYNYEVGSVEGKELLCCCGAIECRGRLL
NT seq
3894 nt
NT seq
+upstream
nt +downstream
nt
atgtcctccctccctgggtgcattggtttggatgcagcaacagctgcagtggagtctgaa
gagattgcagagctgcaacaagcagtggttgaggagctggggatctcaatggaggaactt
cggcagttcatcgacgaagaactagaaaagatggactgtgtacagcagcgtaagaagcaa
ctagcagagttggaaacgtgggtaatacagaaggaatctgaggtggcccatgttgaccag
ctctttgatgatgcatccagggcagtgactaactgtgagtctttggtgaaggacttttat
tccaaactgggtctacaataccgggacagtagctctgaggatgaagcttcccggcctaca
gaaataatcgagattcctgatgaagatgatgatgtcctcagtattgattcaggtgatgct
gggagcagaactcccaaagaccagaagctccgtgaagctatggctgccttaagaaagtca
gctcaggatgtccagaagttcatggatgctgtcaacaagaagagcagttcccaggattta
cataaaggaaccttgagtcagatgtctggagaactgagcaaagatggtgacctgatagtc
agcatgcgcatcctgggcaagaagagaactaagacatggcacaaaggcacccttattgcc
atccagacggttggaccaggaaagaagtacaaggtgaaattcgacaacaaaggaaagagt
ctactgtcggggaaccatattgcctatgattaccaccctcctgctgacaagctgtttgtg
ggcagtcgggtggtggccaagtacaaggatgggaatcaggtctggctctatgctggcatt
gtagctgagacaccgaacgtcaaaaacaagctcaggtttctcattttctttgatgatggc
tatgcttcctatgtcacacagtctgaactatatcccatttgccggccactgaaaaagact
tgggaggacatagaagacatctcctgccgggacttcatagaagagtatatcacggcttac
cccaaccgccccatggtgctgctcaagagtggccagcttatcaagactgagtgggaaggc
acatggtggaagtcccgggtcgaggaggtggatggcagcctagtcaggatcctcttcctg
gatgacaaaagatgtgaatggatctatcgaggctctacacggctagagcccatgttcagc
atgaagacatcctcagcctctgcattggagaagaagcaagggggacagctgaggacacgt
ccaaatatgggtgctgtaaggagcaaaggccctgtggtccaatacacccaggatctgacc
agtactgggacccagttcaagccaatggagcccccgcagcctacagcccctcctgccccc
ccggctccccctgccccacctgccccacctgctccccctcagtccccacaggcaggtgac
aatgacagcttggaaagtcagcttgcccaatctcggaagcaggtagccaaaaagagcaca
tccttccggccaggttctgtgggctctggtcattcctcccctacatctcctgcactcagt
gaaaatgtccctgctgggaaacctggaagcaaccagacatacagatcacctttaggctcc
acagcctctgccccagcagcaccctcagcacctccagcgccccccgccttccacggcatg
ctggagagggccccagcagagccctcctaccgcgcccccatggagaagctcttctactta
cctcatgtgtgcagctatacctgtctgtcccgagtcagacctatgagaagtgctcagtac
cggggcaagaatcctctgctggtcccactactctatgacttccggcggatgacggcccgc
cgccgcgttaaccgcaagatgggctttcatgttatctataagacaccctgtggcctctgc
cttcggacaatgcaggagattgaacgctatctttttgagactggttgtgacttcctcttc
ctggagatgttctgtttggatccatatgttcttgtggaccgaaagtttcagccctataaa
cctttttactatattttggacatcacttatgggaaggaagatgttcccttatcctgtgtc
aatgagattgacacaacccctccaccccaggtggcctacagtaaggaacgaatcccgggc
aagggtgttttcattaacacaggcccagaatttctggtcggttgtgactgcaaggatggg
tgccgtgacaagtccaaatgtgcctgtcatcagctaactatccaggccacagcctgcacc
cctggcggccagatcaatcctaactctggctaccagtacaagagactagaagagtgtctg
cccacaggagtttacgagtgtaacaagcgctgcaaatgtgacccaaacatgtgcacaaac
cggttggtgcagcatggactccaggttcggctacagctattcaagacgcagaacaagggc
tggggtatccgctgcttggatgacattgccaaaggctcctttgtctgtatttatgcaggc
aagatcctgacagatgactttgcggacaaggagggcctggagatgggtgatgagtacttt
gccaatctggaccatatcgagagcgtggagaacttcaaggaaggctatgagagtgatgcc
ccctgttcctcggacagcagcggggtagacttgaaagaccaggaggatggcaacagcggt
acagaggatcccgaagagtccaatgatgacagctccgatgacaacttctgcaaggatgag
gacttcagcaccagctccgtgtggcgcagctatgccacccggcggcagacccggggccaa
aaggagaacggcctgtcggagacagcttccaaggactcccgccccccagacctcggcccc
ccgcatattcctatccctccagcgatccctgtcggtggctgcaatccgccttcctctgaa
gagacacccaagaacaaggtggcctcgtggttgagctgcaatagtgtcagcgagggtggc
tttgctgactctgacagccggtcctccttcaagactagcgaaggtggggaaggccgggct
gggggaggcagaggggaggctgagaaggcctccacctcagggctgggcttcaaggatgag
ggagacatcaagcaggccaagaaagaggaccctgatgaccgaaacaagacgtcaatagtt
actgaaagcgctcgaaattatggttacaatccttctcccatgaagcttgaaggacttcgc
cgcccacctagtaagactagtatgcatcagagccgacgactcatggcctctgctcagtct
aatgctgatgatgtcctaacattgtccagcagcacagaaagcgagggggaaagtgggacc
agccggaagcccaccactggtcagacttcagccacagcagtggatagcgatgatatccag
accatctcctctggctctgaggcagatgactttgaggacaagaagaacatgtctggtcca
acaaaacgccaggtggcagtaaaatcaacccgaggctttgctcttaaatcaacccatggg
attgccattaaatcaaccaacatggcatccgtggaaaagggggagagtgcacctgttcgc
aagaacacacggcagttctatgatggggaagagtcttgctatatcattgatgccaagctc
gaaggcaacctgggccgctacctcaatcatagctgcagccccaacttgtttgtccagaat
gtcttcgtggacactcacgatcttcgcttcccctgggtggccttctttgccagcaagagg
atccgggctggcacagagctcacgtgggactacaactacgaggtgggcagtgtggaaggc
aaggaactgctctgctgctgcggggccatcgagtgcagagggcgtcttctttag
DBGET
integrated database retrieval system
