Mirounga leonina (Southern elephant seal): 118009245
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Entry
118009245 CDS
T07472
Symbol
LIG4
Name
(RefSeq) DNA ligase 4
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
mlx
Mirounga leonina (Southern elephant seal)
Pathway
mlx03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
mlx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
118009245 (LIG4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mlx03400
]
118009245 (LIG4)
Enzymes [BR:
mlx01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
118009245 (LIG4)
DNA repair and recombination proteins [BR:
mlx03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
118009245 (LIG4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
BRCT
DNA_ligase_IV
DNA_ligase_A_C
BRCT_2
RNA_ligase
mRNA_cap_enzyme
ATG17_like
Motif
Other DBs
NCBI-GeneID:
118009245
NCBI-ProteinID:
XP_034858952
LinkDB
All DBs
Position
Unknown
AA seq
911 aa
AA seq
DB search
MAASQTSQTVASHVPFADLCSTLERIQRSKGRAEKIRHFREFLDSWRRFHDALHKNQKDV
RDSFYPAMRLILPQLERERMAYGIKETMLAKLYIELLNLPKEGKDALKLLNYRTPTRPHG
DAGDFATIAYFVLKPRCLQKGSLTVQQVNDILDSIASNNSARRKDLIKKSVLQLISQSSA
LEQKWLIRMIVKDLKLGFSEQSVFSVFHNDAAELHNVTTDLEKVCRQLHDPSIGLSDISI
TLFSAFKPMLAAIADIERIEKDMKHQSFYIETKLDGERMQMHKQGDAYQYFSRNGFNYTD
QFGDSPREGSLTPFIHSAFKTDIQICILDGEMMAFNPNTQTFMQKGNKFDIKRMVEDSDL
QTCYCVFDVLMVNNKKLGHETLKKRYEILTSVFTPVPGRIEIVQKTQAHTQKEVIDALNE
AIDKREEGIMIKQPLSIYKPDKRGEGWLKIKPEYVDGLMDELDILIVGGYWGKGSRGGMM
SHFLCAIAEKPPPGEKPSVFHTLCRVGSGYTMKELYDLGLKLAQHWKPFHKKAPPSSILC
GTEKPEVYIEPCHSVIVQVKATEIVSSDMYKAGCTLRFPRIEKIREDKEWHECTTLDDLE
QLRGKASGKLASKHLYIGGDDEPQEKKRKAAPKVKKVIGIIEHLKAPNLSNVNKVSNVFE
DVEFCVMSGTDSHPKPDLENRIAEFGGYIVQNPGPDTYCVIAGSENIRVKNIISSNKHDV
VKPEWLLECFKTKSCVPWQPHFMIHMCPSTKEHFAREYDCYGDSYFVDTDLNQLKEVFSG
IKNSSAQTPGEMASVIANLEYRYSWDRSPLSMFRHHIIYLDLYAVINDLSTKIEGTRLAV
TALELRFHGAKVVSRLAQGVSHVIIGEDQSRVADLKAFRRTLKRKFKILQQDWVTDSIDK
CELQEENLYLV
NT seq
2736 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgtcacagacttcacaaactgttgcatctcacgttccttttgcagacttgtgt
tcaactttagaacgaatacagagaagtaaaggacgtgctgaaaaaatcagacacttcagg
gaatttttagattcttggagaagatttcacgatgctcttcataagaaccaaaaagatgtc
agggactccttttatccagcaatgagacttattcttcctcagctagaaagagagagaatg
gcctatggaatcaaagaaactatgcttgctaaactttatatcgaattacttaatttacct
aaagaaggaaaagacgcccttaaacttttaaattatagaacgcccacccggcctcatgga
gatgctggagactttgcaacaattgcatattttgtgttgaaaccaagatgcttgcagaaa
ggaagtttaaccgtacagcaggtaaatgacattttagactcaattgccagcaataattct
gccagaagaaaggacctaataaagaagagtgttcttcagctaataagtcagagttcagcg
ctggaacaaaagtggcttatacggatgattgtaaaggacttaaaacttggtttcagtgag
cagtctgtattttctgttttccataatgatgctgccgaattgcataatgtcaccacagat
ctggaaaaagtctgtaggcaactgcatgatccttccataggactcagtgatatttccatc
actttattctctgcctttaaaccaatgctggctgctatagcagatattgagcgcatcgag
aaggacatgaaacaccagagtttctacattgaaaccaagctagacggtgagcgtatgcag
atgcacaaacagggggatgcgtatcagtacttctcccgaaatggttttaactatacagat
cagttcggcgattctccccgggaaggttctctcacaccgttcattcacagtgcattcaaa
acagacatacaaatctgtatcctggatggagagatgatggccttcaaccctaacacacag
acttttatgcaaaaggggaataagtttgatatcaaaagaatggtggaggattctgatctg
cagacttgttattgtgtgtttgatgtactgatggttaataataaaaagctagggcatgaa
accctgaaaaagaggtatgaaattctcactagtgtttttacaccagtaccaggtagaata
gaaatagtgcaaaaaacacaagctcatactcagaaagaagtgatcgatgctttgaatgaa
gccatagataaaagggaagagggaatcatgataaaacagcctctgtctatttacaagcca
gacaaaagaggcgaaggatggttgaaaattaaaccagagtatgtggacgggctgatggat
gagctggacatcttaattgtcgggggctactggggtaaaggttcccgaggtgggatgatg
tctcattttttgtgtgctatagcagagaaacctcctcctggtgaaaaaccgtcagtgttt
catactctgtgtcgtgttggttcaggttataccatgaaagagctgtacgatctgggtttg
aaattggcccaacattggaagccttttcataaaaaagctccaccaagcagcattttgtgt
ggaacagagaagcctgaggtgtacatcgagccttgtcattctgtcattgttcaagttaag
gccacagagatcgtctccagcgatatgtacaaagctggctgcacattgcgttttccacga
atcgagaagataagagaagacaaagagtggcacgaatgcaccaccctggatgacttagaa
cagcttcgtgggaaagcatcgggaaagcttgcgtccaaacacctttacataggtggcgat
gatgaaccacaggaaaagaagaggaaagctgccccgaaggtgaagaaagttattggaatt
atcgagcacttaaaagcacccaacctttctaatgtaaacaaagtttctaatgtatttgaa
gatgtggagttttgtgtcatgagtggaacggacagccatccgaagcctgatctggagaac
agaattgcagaatttggtggttatatagtacaaaatccaggcccagacacatactgcgtg
attgcagggtccgagaacatcagagtgaaaaacataatttcttcgaataaacatgatgtt
gtcaagcccgagtggctgttggagtgttttaagaccaaaagctgcgtgccatggcagcct
cactttatgattcatatgtgcccatcgacaaaggaacattttgcccgtgaatatgactgt
tatggtgacagttattttgttgatacagatttgaaccaactgaaggaagtgttctcagga
attaaaaattccagcgcacaaactcccggagaaatggcttctgtgattgctaatttagag
tatcggtattcctgggaccgttcccctctcagtatgtttcgacaccacattatttatttg
gacttgtatgctgttattaatgacttgagtaccaaaatcgagggaacgagattagctgtt
acagctctggagcttcgatttcatggagccaaagtagtttctcgtttagctcagggagtg
tctcatgtaatcattggggaggatcagagtcgtgttgcagatttaaaagcttttcgaaga
actcttaagagaaagtttaaaatcctgcaacaagattgggtaactgattcaatagacaag
tgtgagttgcaggaggaaaatctatatttggtttaa
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