Mirounga leonina (Southern elephant seal): 118018496
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Entry
118018496 CDS
T07472
Symbol
TPCN1
Name
(RefSeq) two pore calcium channel protein 1 isoform X1
KO
K16896
two pore calcium channel protein 1
Organism
mlx
Mirounga leonina (Southern elephant seal)
Pathway
mlx04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
mlx00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
118018496 (TPCN1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
mlx04040
]
118018496 (TPCN1)
Ion channels [BR:
mlx04040
]
Voltage-gated cation channels
Calcium channel, two-pore (TPC)
118018496 (TPCN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Pilin_N
YMF19
TMF_TATA_bd
Motif
Other DBs
NCBI-GeneID:
118018496
NCBI-ProteinID:
XP_034872941
LinkDB
All DBs
Position
Unknown
AA seq
815 aa
AA seq
DB search
MAVSLDDDVPLILTLDEGGSAPLAPSNGLGQEELPSRNGGSYAIHDSRTASLGSGGESPT
GHNWEINYQEAAIYLQEGENNDKFFTHPKNAKALAAYLFAHNHLFYLMELSTALLLLLLS
LCEAPAVPALRLGIYVHATLELFALMVVVFELCMKLRWLGLHTFIRHKRTMVKTSVLVVQ
FIEAIVVLVRQTSHVRVTRALRCIFLVDCRYCGGVRRNLRQIFQSLPPFMDILLLLLFFM
VIFAILGFYLFSPDPSDPYFSTLENSIVSLFVLLTTANFPDVMMPSYSRNPWSCVFFIVY
LSIELYFIMNLLLAVVFDTFNDIEKRKFKSLLLHKRTAIQHAYRLLISQRRPSGISYRQF
EGLMRFYRPRMSAMERYLTFKALNQSNTPLLSLKDFYDIYEVAALKWKAKRNREHWFDEL
PRTAFLIFKGINILVKSKAFQYFMYLVVAVNGIWILVETFMLKGGNFFSKHVPWSYVVFL
TIYGVELFLKVAGLGPVEYLSSGWNLFDFSVTVFAFLGLLALAFDMEPFYFIVVLRPLQL
LRLFKLKKRYRNVLDTMFELLPRMASLGLTLLIFYYSFAIVGMEFFCGILYPNCCNTSTV
ADAYRWLNHTVGNKTVVDEGYYYLNNFDNILNSFVTLFELTVVNNWYIIMEGVTSQTSHW
SRLYFMTFYIVTMVVMTIIVAFILEAFVFRMNYSRKNQDSEVDGGITLEKEISKDELVAV
LELYREVRGATSDVARLLKVLSQMERHEQNTVVFLGRRSRTKSDLSLKMYQEEIQEWYEE
HAREQEERQGQLIGSGQVPTTQQLPGGRQRSQTVT
NT seq
2448 nt
NT seq
+upstream
nt +downstream
nt
atggccgtgagtttagatgacgacgttcccctcatcctgaccttggacgagggtggcagc
gccccactagctccctccaacggcctgggccaagaggagctgcctagcagaaatggaggc
agctatgccatccacgactcccggaccgccagtctaggctcagggggtgagagtcccacc
ggtcacaactgggagatcaattatcaagaggcagcaatctacctccaggaaggcgagaat
aatgacaagttcttcacccaccccaagaacgccaaagcgctggcggcctacctctttgca
cacaaccacctcttctacctgatggagctgtccacagccctgctcttgctgctactctcc
ctgtgtgaggcccccgccgtccccgcgctccggctcggcatttacgtccacgcgaccctg
gagctgttcgccctgatggtggttgtgtttgaactctgcatgaagttgcggtggctgggc
ctccataccttcatccggcacaaacggaccatggtcaagacctccgtgctggtggtgcag
ttcatcgaggccattgtggtgttggtacggcagacgtcccacgtgcgtgtgacccgggcg
ctgcgctgcattttcctggtggactgtcggtactgcgggggcgtccggcgcaacctgcgg
cagatcttccagtctctgccgcccttcatggacatcctcctgctgctgctgttcttcatg
gtcattttcgccatcctcggtttctacttgttctcccctgatccttcagacccctacttc
agcacgctggagaacagcatcgtcagtctgtttgtccttctgaccacagccaatttccca
gatgtgatgatgccctcctactcccggaacccctggtcctgtgtcttcttcatcgtctac
ctctccatcgagctgtacttcatcatgaacctgcttctggccgtggtgttcgacaccttc
aatgacattgagaaacgcaagttcaagtctctgctgctgcataagcgaactgccatccag
catgcctaccgcctactcatcagccaacggagaccctccggcatctcctacaggcagttt
gaaggcctgatgcgcttctacaggccccggatgagtgccatggagcgttatctgactttt
aaggccctgaatcagagcaacacacctctgctcagcctgaaagacttttatgatatctac
gaagttgctgccttgaagtggaaggccaagagaaatagagaacactggtttgatgagctt
cccagaacagcattcctcatcttcaaaggaattaatatccttgtgaagtccaaggccttc
cagtatttcatgtacttggtggtggcagtcaatgggatctggatccttgtggagaccttc
atgctgaaaggtgggaacttcttctccaagcatgtgccctggagttacgtcgtctttctg
actatatacggggtggagctgttcctgaaggttgctggccttggccccgtggaatacctg
tcctccgggtggaatctgttcgacttctcggtcacggtgttcgccttcctgggactgctg
gctctggccttcgacatggagcccttttatttcatagtcgtcctgcgtcccctccagctg
ctgaggttgtttaagttgaaaaagcgctaccgcaatgtgctggacaccatgtttgagctg
ctgccccggatggccagcctcggcctcaccctgctcatcttttactactccttcgccatc
gtgggcatggaattcttctgtgggatcctctaccccaactgctgcaataccagcaccgtg
gctgacgcctaccgctggctcaatcacaccgtgggcaataagaccgttgtggatgaaggc
tattattatctcaataactttgacaacatcctgaacagcttcgtgaccttgttcgagctc
acagttgtcaacaactggtacatcattatggaaggtgtcacctctcagacctcacactgg
agccgcctctacttcatgactttttacatcgtgaccatggtggtgatgaccatcattgtc
gccttcatcctcgaggccttcgtcttccgaatgaactacagccgcaagaaccaggactcg
gaagttgatggtggcatcaccctcgagaaggaaatctccaaagatgagctggttgctgtc
ctggagctctaccgagaggtgcgaggagccacctcggacgtcgcccggctgctcaaggtc
ctctcccagatggagagacatgagcaaaacaccgtggtgtttctgggacggagatcaagg
accaaaagtgacctgagcctaaagatgtaccaagaagagattcaggagtggtacgaggag
cacgcccgcgagcaagaggagcggcagggacagctcatcggcagcggccaggtccccacc
acccagcagctcccaggcggccgccagcgctcccagaccgtcacctag
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