Mirounga leonina (Southern elephant seal): 118020137
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Entry
118020137 CDS
T07472
Symbol
AGRN
Name
(RefSeq) agrin isoform X1
KO
K06254
agrin
Organism
mlx
Mirounga leonina (Southern elephant seal)
Pathway
mlx04512
ECM-receptor interaction
mlx04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
mlx00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
118020137 (AGRN)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
118020137 (AGRN)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
mlx00535
]
118020137 (AGRN)
Proteoglycans [BR:
mlx00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
118020137 (AGRN)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Laminin_G_1
Kazal_2
Laminin_G_2
Kazal_1
NtA
EGF_laminin
Kazal_CFAI
SEA
EGF
Motif
Other DBs
NCBI-GeneID:
118020137
NCBI-ProteinID:
XP_034875984
LinkDB
All DBs
Position
Unknown
AA seq
2070 aa
AA seq
DB search
MASLRPSGSAPLQPLLLLLVVAARALPRADGTCPERALERREEEANVVLTGTVEEILNVD
PVQHTYSCKVRVWRYLKGKDMVTQESLLDGGNKVVIGGFGDPLICDNQVSTGDTRIFFVN
PAPPYLWPAHKNELMLNSSLMRITLRNLEEVEHCVEDKPGTHFTPAPPTPPDACRGMLCG
FGAVCQPSAEGSGRASCVCRKSACPALVAPVCGSDASTYSSECELRRAQCSRQRRIRLLS
RGPCGSRDPCSNVTCSFGSTCVRSADGHTATCLCPATCQGPPDGPVCGSDGADYPSECQL
LRHACARQENVFKKFDGPCDPCQGARGDLSRVCRVNPRTRRPEMLLRPESCPPRHAPVCG
DDGVTYDNDCIMGRTGAARGLLLQKVRSGRCQPQDQCADVCRFGAVCLSRRGRARCSCDR
VVCDGAYRPVCALDGHTYDSDCWRQRAECQQQRAVPAKHQGLCDQPLSPCLGVQCPFGAS
CAVKNGEAECVCLQACSGVYDPVCGSDGVTYGSPCELEATACALGREIRVARRGPCDRCG
QCRFGALCEAESGRCVCPSECVASAQPVCGSDGHTYASECELHVHACTRQISLHVVSAGH
CQACGDTVCAFGAVCSAGRCVCPRCERPPPGPVCGSDGVTYDSACQLREAACRQQTHIQE
ARAGPCEQAECGSGGSGSGEDGECEQELCRQRGGVWDEDSEDGPCVCDFSCHGAPRSPVC
GSDGVTYGTECELKKARCESQRELYVTAQGACRGPTLAPLPPAAPPHCTQTPYGCCQDNI
TAARGVGLAGCPSSCHCNPHGSYSGTCDPATGQCSCRPGVGGLKCDRCEPGFWNFRGIVT
DGRSGCTPCSCDPRGAVRDDCEQMTGLCSCKPGVAGPKCGQCPEGHALGPGGCETDSLAP
ETCAEMRCEFGASCVEEAGSAHCVCPTSTCPEANATKVCGSDGVTYGNECQLRTIACRQG
LDISIQSLGPCRDSVPPAEAAGPGAPPTPGPVATSGLNVSKALPSPPGALPRAPSSTPPS
QPTPRPSPGPWTPAGIPRTTPRPVLTMPPTAAATASLTTSAFGESGSADGSGDEGLSGDL
EASGTGSGGLEPPDGGSAATPGPPVERASCYNAPLGCCSDGKTPSLDTEGSNCPATKAFQ
GVLELEGVEGQELFYTPEMADPKSELFGETARSIESTLDDLFRNSDVKKDFRSVRLRDLG
PGSSVRAIVDVHFDPATTFRASDVGQALLRQIQASRRRSLGVRRPLQEHVRFMDFDWFPA
FFLGATTGAAAAAATARATTMAHVPSAVTQRALHPSHTSRPVGRTTALPTTRQPPTTAPR
RVPGRRPLPSGPQQPPKPCDSQPCLHGGTCQDQDSAGGFTCSCPVGRRGAVCEKALHPSV
PAFGGHSFLAFPTLRAYHTLRLALEFRALEPQGLLLYNGNARGKDFLALTLLGGRVQLWF
DTGSGPAVLTSLVPIEPGRWYRLELSRHWRRGSLSVDGETPVLGHSPSGTDGLNLDTDLF
VGGVPADQAAVVLERTSIRVGLRGCIRLLDVNNQRLELSSWQGAVTRSSGVGECGDHPCL
PNPCLGGAPCQALEAGMFHCQCPPGRFGPTCSVDKNPCEPNPCHGAAPCRVLPEGEAKCE
CPQGRGGTICQTVSERDHSQPFLADFSGFSYLELKGLHTFDRDLGEKMVLEVVFLARGPN
GLLLFNGQKTDGKGDFVSLALRDRFLEFRYDLGKGAAVIRSKEPVALDTWTRVLLERNGR
KGAMRVSDGPRVLGESPVPHTVLNLKEPLYVGGAPDFSKLARAAAVSSGFDGVIQRVSLK
GQELLTQEHVVRSVDVSSFAHHPCTQASGHPCLNGASCLPREASYECLCPGGFSGLHCEK
GLIEKSAGDVDALAFDGQTYIEYLNAVTESELTNEIPAPDAPDSGALPSEKALQGNHFEL
SLRTEATQGLVLWSGKATERADYLALAIVDGRLQLTYDLGSQPVVLHSTVPVNTNRWLRV
RAHREQREGSLQVGNEAPVTGSSPLGATQLDTDGALWLGGLEKLPTGQALPKAYSTGFVG
CLRDVVVGQRPLHLLEDAVTKPELQPCATP
NT seq
6213 nt
NT seq
+upstream
nt +downstream
nt
atggccagcctgcggccgtccggctcggccccgctgcagccgctactgctgctcctggtg
gtggccgcgcgcgccctgccccgcgccgacgggacgtgcccggaacgcgcgctggagcgg
cgggaggaggaggcgaatgtggtgctcaccggcaccgtggaggagattctcaacgtggac
ccggtgcagcacacgtactcgtgcaaggttcgagtctggcggtacttgaagggcaaagac
atggtgacccaagagagcctgcttgacggtggcaacaaggtggtgattggcggctttgga
gaccccctcatctgtgacaaccaggtgtccactggggacaccaggatcttctttgtgaac
cctgcacccccatacctgtggccagcccataaaaatgagctgatgctcaattccagcctc
atgcgcatcaccctgcggaatctggaggaagtggagcactgtgtagaagacaaacctggg
acccacttcacaccagcgccccccacgcctccagatgcatgccgaggaatgctgtgtggc
ttcggcgccgtgtgccagcccagcgcagagggctccggccgagcctcctgcgtgtgcagg
aagagcgcctgccccgccctggtggcccccgtgtgcggttccgacgcctccacctacagc
agcgagtgcgagctgcggcgggcacagtgtagccggcagcgccgcatccgcctactcagc
cgagggccctgcgggtcccgggacccctgctccaacgtgacgtgcagctttggcagcacc
tgtgtgcgctcagcagatgggcacacggccacgtgcctgtgcccagccacctgccagggg
ccccccgacggccccgtgtgcggcagcgacggggcggactaccccagcgagtgccagctc
ctacgccacgcgtgcgcccgccaggagaacgtcttcaagaagttcgacggcccctgtgac
ccctgccagggtgcccgcggtgacctgagccgtgtctgccgcgtgaacccacgcacgcgg
cgccccgagatgctcctgcggccggagagctgtcctcctcggcacgcacccgtgtgcggg
gatgacggggtcacctacgacaatgactgcataatgggccgcacgggcgctgcccgcggc
cttctcctccagaaagtgcgctctggccggtgccagcctcaagaccagtgcgcagacgtg
tgcaggttcggtgccgtgtgcctgtcccgccgaggccgtgcccgctgctcctgcgaccgc
gtcgtctgtgacggggcttaccggcccgtgtgcgcgctcgacgggcacacgtatgacagc
gactgctggcgccagcgggctgagtgtcagcagcagcgtgccgtccccgccaagcaccag
ggcctgtgtgaccagcccctgtccccgtgccttggggtgcagtgcccgtttggggcgtcg
tgtgctgtgaagaacggcgaagcggagtgcgtgtgcctgcaggcgtgttcgggcgtctac
gaccctgtatgtggcagcgacggcgtcacgtacggcagcccgtgcgagctggaggccacg
gcctgcgccctgggacgggagatccgggtggcccgcagaggaccctgtgaccgctgcggg
cagtgccgctttggagctctgtgtgaggccgagagcgggcgctgcgtgtgcccctccgag
tgcgtggcctcggctcagcccgtgtgcggttccgacgggcacacgtacgccagcgagtgt
gagctgcacgtccacgcctgcacgcggcagatcagcctgcatgtggtctcagccgggcac
tgccaggcctgcggggacacggtgtgcgccttcggggccgtgtgctcggccgggcggtgc
gtgtgtccccggtgcgagcggcccccacctggccccgtgtgcggcagcgacggcgtcacc
tacgacagcgcctgtcagctccgggaggcagcctgccggcagcagacacacatccaggag
gcccgggcggggccctgtgagcaggctgagtgcggctcggggggctccggctccggagag
gacggagagtgtgagcaggagctgtgccggcagcgaggcggcgtctgggacgaggactcg
gaggatgggccgtgcgtctgtgacttcagctgccacggcgccccgcggagcccggtgtgt
ggctcggatggggtcacctatggcaccgagtgtgagctgaagaaggcccggtgtgagtcg
cagcgagaactgtacgtcacggcccagggcgcctgccgcggccccaccttggccccactg
ccacccgcagcacccccgcactgcacccagaccccctacggctgctgccaggacaacatc
actgcggcccgcggtgtgggcctggccggctgccccagctcctgccattgcaacccgcat
gggtcctacagtggtacctgtgacccagccacgggtcagtgctcctgccgcccgggcgtc
gggggcctcaagtgtgaccgctgtgagcctggcttctggaacttccgtggcattgtcact
gatggccggagcggctgcaccccctgcagctgtgacccccggggcgcggtgcgggacgac
tgtgagcagatgaccgggctgtgctcatgtaagcccggggtggccgggcccaagtgcggg
cagtgtccagaaggccacgccctgggccccggaggctgtgaaacagattccttggcgcct
gagacgtgtgctgagatgcgctgtgagtttggggcgtcctgtgtggaggaggctggctcc
gcacattgtgtgtgcccaacatccacctgtccggaggccaatgctaccaaggtctgtggg
tcggacggagtgacctacggcaacgagtgccagctgaggaccatcgcctgccgccagggc
ttggacatctccatccagagccttggcccgtgccgggactctgttcctcctgcagaggct
gctggtcctggtgcacccccaacacctggacccgtggccacgtcagggctcaacgtgagc
aaggcgctgccatccccccccggcgccctgccccgggctcccagcagtacccctcccagc
cagcccacacctcgaccctcaccggggccgtggacccctgccggcatccccaggacgacc
ccgaggcccgtgctgaccatgccccccacggccgctgccacggccagcctcaccacgtcg
gcctttggcgaatctggcagtgctgacgggagcggtgatgagggactgagcggtgacctg
gaggccagtgggactggctcagggggactcgagccccctgacggtggcagtgctgcgacc
cctgggccacccgtggagagggcttcttgctacaacgcacctttgggctgctgctcagac
ggcaagacgccctcgctggacacagagggttccaactgtcctgccaccaaggcgttccag
ggtgtgctggagcttgagggggtcgaggggcaagagctgttctacacaccggagatggcc
gaccccaagtcagagctttttggggagaccgctaggagcatcgagagcacactggatgac
ctcttccggaactcagatgttaagaaggacttccgaagtgtccgcctgcgggacttgggg
cctggcagctcagtccgagccattgtggacgtgcacttcgaccctgccacaacctttagg
gcgtctgatgtgggccaggccctgctccggcagatacaggcgtcccggcgccggtccctg
ggggtgcggcggcccctgcaggagcacgtacgctttatggactttgactggtttcccgcg
ttcttcctgggagccaccacaggagctgcggctgctgcagccacggccagagcgaccact
atggcccacgtgccttctgctgtgacccagcgggccctccaccccagccacacaagccgg
cctgttggcaggaccacggccctgcccaccacacgccagccccccaccactgccccccgt
cgcgtgcctggacgccggcccttgccctcaggcccccagcagccgccgaagccctgtgac
tcccagccctgcctccacgggggaacctgccaggaccaggactcggctggaggcttcacc
tgcagctgcccagtgggcaggaggggtgccgtctgcgagaaggcactgcacccctctgtg
ccagccttcgggggccactccttcctggccttccccaccctccgtgcctaccacacactg
cgcctggcactggagttccgggcactagagccccagggactcctactctataacggcaat
gcccggggcaaggacttcctggcactgactctgctggggggccgtgtgcagctctggttt
gacaccggctcagggcccgcagtgctgaccagcttggtgcccatagagcccggccgctgg
taccgcttggagctgtctcggcattggcgccggggctcgctctcagtggatggggagacc
cctgttctgggccatagccccagcgggactgatggtctcaacctggacacagacctcttt
gtgggcggcgtcccggcggaccaggctgccgtggtgctcgaaaggacctccattcgtgtt
ggcctcaggggctgcatccgcctgctggacgtcaataatcagcggttggagctcagcagc
tggcagggggctgtaacccgaagctccggtgtgggcgagtgcggggaccacccctgcctg
cccaacccctgcctcggcggggccccgtgccaggccctggaggctggcatgttccactgt
cagtgcccacctggccgctttggtccaacctgtagcgttgacaagaacccctgtgagccc
aacccctgccatggggcagccccctgccgcgtgttgcctgagggggaggccaagtgcgaa
tgcccccagggacgggggggcaccatctgccagacagtctctgagcgggatcattcccag
cccttcctggctgacttcagcggcttctcctacctggagctgaaaggcttgcacaccttt
gaccgggacctaggggagaaaatggtactggaggtggtgttcttggcacgtggccccaac
ggcctgctcctcttcaacgggcagaagacagacggcaagggggacttcgtgtccttggcc
ttgcgtgaccgcttcctggagttccgctacgacctgggcaagggggcggcggtcatcagg
agcaaggagccagtggccctggacacctggaccagggtcttactggagcgcaacggccgc
aagggcgccatgcgggtcagtgacgggccgcgcgtgctgggggagtccccggtgccacac
actgtcctcaatctgaaggagccgctctatgtgggaggggcccctgacttcagcaagctg
gcccgggcagccgcagtgtcctccggcttcgacggcgtcatccagcgggtctccttgaaa
ggccaggagctgctgacccaggagcacgtggttcggtccgtggatgtctcgtcttttgcc
caccacccttgtacccaggcctcaggccacccgtgcctcaatggggcctcctgcctccct
cgggaggcctcctacgagtgcctgtgtcccgggggcttctccgggcttcactgcgagaag
gggctgattgagaagtcagcaggggatgtggacgccctggcctttgacggacaaacctac
atcgaatacctcaatgctgtgactgagagcgaactgaccaatgagatcccagctcctgat
gctccggattccggggcccttcccagtgagaaggccctgcagggcaaccactttgagctg
agtctgcgcacggaggccacccaggggctggtgctgtggagtggcaaggccacggagcgg
gcggactacctcgcgctggccatcgtggatgggcgcctgcagctgacctacgacttgggc
tcccagcccgtggtgctacactccaccgtgccggtcaacaccaaccgctggttgcgggtc
agggcacatagggaacagagggaaggttcccttcaggtgggcaacgaggcccctgtgact
ggctcttccccactgggtgccacacagctagacacagacggagccctatggctgggtggc
ctggagaagctgcccacgggccaggccctgcccaaggcctacagcacaggctttgtgggc
tgtctgcgggacgtggtggtgggtcagcgcccgctgcacctgctggaggatgctgtcacc
aagccggagcttcagccctgcgccaccccatga
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