Mirounga leonina (Southern elephant seal): 118024355
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Entry
118024355 CDS
T07472
Symbol
SLIT1
Name
(RefSeq) slit homolog 1 protein
KO
K06838
slit 1
Organism
mlx
Mirounga leonina (Southern elephant seal)
Pathway
mlx04360
Axon guidance
mlx04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
mlx00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
118024355 (SLIT1)
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
118024355 (SLIT1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
mlx00536
]
118024355 (SLIT1)
Glycosaminoglycan binding proteins [BR:
mlx00536
]
Heparan sulfate / Heparin
Axon guidance molecules
118024355 (SLIT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
EGF
Laminin_G_2
Laminin_G_1
LRRNT
hEGF
LRRCT
LRR_1
LRR_9
LRR_14
EGF_TEN
EGF_DL_JAG
EGF_3
EGF_2
Laminin_G_3
Motif
Other DBs
NCBI-GeneID:
118024355
NCBI-ProteinID:
XP_034882123
LinkDB
All DBs
Position
Unknown
AA seq
1531 aa
AA seq
DB search
MALTPRRGPSAGLVRPELWLLLWTAAWRLGATACPALCTCTGTTVDCHGTGLQAIPKNIP
RNTERLELNGNNITRIHKNDFAGLKQLRVLQLMENQIGVVERGAFDDMKELERLRLNRNQ
LHMLPELLFQNNQALSRLDLSENTIQAIPRKAFRGATDLKNLQLDKNQISCIEEGAFRAL
RGLEVLTLNNNNITTIPVSSFNHMPKLRTFRLHSNHLFCDCHLAWLSQWLRQRPTIGLFT
QCSGPASLRGLNVAEVQKSEFSCSGQGEAGRVPSCTLSSGSCPAICTCSNGIVDCRGKGL
TAIPANLPDTMTEIRLELNGIKSIPPGAFSPYRKLRRIDLSNNQIAEMAPDAFQGLRSLN
SLVLYGNKITDLPRGVFGGLYTLQLLLLNANKINCVRPDAFQDLQNLSLLSLYDNKIQSL
AKGTFTSLRAIQTLHLAQNPFICDCNLKWLADFLRTNPIETSGARCASPRRLANKRIGQI
KSKKFRCSAKEQYFIPGTENYQLNSECNSDAICPPKCRCEASLAECSSLKLTKIPERIPQ
STAELRLNNNEISILEATGIFKKLTHLKKINLSNNKVSEIEDGAFEGAASVSELHLTANQ
LESIRSGMFRGLDSLRTLMLRNNRIGCIHNDSFTGLRNVRLLSLYDNQIATISPGAFDTL
QALSTLNLLANPFNCNCQLAWLGDWLRRRKIVTGNPRCQNPDFLRQIPLQDVAFPDFRCE
EGQEEGGCLPRPQCPQECACLDTVVRCSNKHLQVLPKGIPKNVTELYLDGNQFTLVPGQL
STFKYLQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNALQCIPPLAFQGLHSLRLLSLH
GNDISTLPEGIFTDVTSLSHLAIGANPLYCDCRLRWLSGWVKTGYKEPGIARCAGPPDME
GKLLLTTPAKKFECQGPPALAVQAKCDPCLSSPCQNQGTCHNDPLEVYRCACSSSYKGRN
CEVSLDSCSSGPCGHGGTCRSQEGENAGFMCSCPTGYEGPTCEVNTDDCVEHPCANGGVC
VDGVGNYSCRCPLQYTGKACEQLVDFCSPDLNPCQHEAQCVGTPDGPRCECAPGYAGDNC
SENQDDCRDHRCRHGAQCVDEVNSYSCLCAEGYSGQFCESPPAPRSPCEGTECQNGANCV
DQGSGPVCQCLPGFGGPECEKLLSVNFVDRDTYLQFTDLQNWPRANITLQVSTAEDNGIL
LYNGDNDHIAVELYQGHVRVSYDPGSYPSSAIYSAETINDGQFHTVELVTFDQMVNLSID
GGSPMTMDNFGKHYTLNSEAPLYVGGMPVDVNSAAFRLWQILNGTSFHGCIRNLYINNEL
QDFTKTRMKPGVVPGCEPCRKLYCLHGICQPRAAPGPVCHCEAGWGGLHCDQPADGPCHG
HKCVHGKCVPLDALSYSCQCQDGYSGALCNQAGAPADPCGGLQCLHGHCQALATKGAHCV
CDPGFSGELCEQESECRGSPVRDFHQVQRGYAICQTTRPLSWVECRGSCPGQGCCQGLRL
KRRKFTFECSDGTSFAEEVEKPTKCGCGVCA
NT seq
4596 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgacgccccggagggggccctcggcggggcttgtccggcccgagctctggctg
ctgctgtggacggccgcctggcgcctgggtgccaccgcgtgccccgccctctgcacctgc
accggcaccacggtggactgccacggcacggggctgcaggccatcccgaagaacatccca
cggaacacggagcgcctggaactcaacgggaacaatatcactcggatccacaaaaacgac
ttcgcggggctcaagcagcttcgggtgctgcagctgatggagaaccagattggagtggtg
gagcggggggcttttgacgacatgaaggagctggagcggttacgactgaaccggaaccag
ctgcacatgttaccagaactgctgttccagaataaccaggctctgtcgaggctggacctg
agtgagaacacaatccaggccatccccagaaaagcttttcgtggagctacagacctcaaa
aatttacagctggacaagaaccagatcagctgcatcgaggaaggggccttccgggctctg
cgggggctggaggtgctgaccctgaacaacaacaacatcaccaccatccccgtgtccagc
ttcaaccacatgcccaagctgcggaccttccgcctgcactccaatcacctgttctgcgac
tgtcacctggcctggctctcacagtggctcaggcagaggccaaccatcgggctcttcacc
cagtgctcgggccccgccagcctgcgtggcctcaatgtggccgaggtccagaagagtgag
ttcagctgctcaggccaaggggaggcgggccgcgtgccttcctgcaccctctcctccggc
tcctgccccgccatctgcacctgcagcaatggcattgtggactgtcgtggcaaaggcctc
acggccatccctgccaacctgcctgacaccatgacggagatccgcctggagctcaatggg
atcaagtccatccccccaggagccttctctccctacagaaagctgcggaggatagacctg
agcaacaaccagatcgcagagatggcgcccgacgccttccagggcctccgctccctgaac
tcgctggtcctgtatgggaacaagatcacagacctcccccggggtgtgtttggaggcctg
tacaccctacagctcctgctcttgaacgccaacaagatcaactgtgtccggcccgatgcc
ttccaggatctgcagaacctctcacttctctccctgtatgacaacaagatccagagcctc
gccaagggcaccttcacctccctgcgggccatccagaccctgcatctggcacagaaccct
ttcatctgtgactgtaacctcaagtggctggcggacttcctgcgcaccaaccccatcgag
acgagcggggcccgctgcgccagcccccggcgcctcgccaacaagcgcatcgggcagatc
aagagcaagaagttccgctgctcagccaaagagcagtacttcattccaggcacggagaac
taccagctgaacagcgagtgcaacagcgacgccatctgtccgcccaagtgccgctgtgag
gccagcctggcggagtgctccagcctgaagctcaccaagatccccgagcgcatcccccag
tccacggccgagctacgattaaacaacaatgagatttccatcctggaggccactgggata
tttaaaaaactcactcatctgaagaagatcaatctgagcaacaacaaggtgtcagaaatc
gaagatggggccttcgagggcgcagcctctgtgagcgagctgcacctgactgccaaccag
ttggagtccatccggagtggcatgttccgaggcctggacagcttgaggaccctgatgctg
aggaacaaccgcatcggctgcatccacaatgacagcttcacgggcctgcgcaatgtccgc
ctcctctcactctacgacaaccagatcgccaccatctccccgggggccttcgacaccctc
caggccctctccacgctaaaccttctggccaaccctttcaactgcaactgccagctggcc
tggctgggcgactggctgcggaggaggaagatcgtgaccgggaacccgcggtgccagaac
ccggacttcttgcggcagatcccccttcaggacgtggcctttcccgacttcaggtgtgag
gaaggccaggaggaggggggctgcctgccccgcccacagtgcccccaggaatgtgcctgt
ctggataccgtagtccgatgcagcaacaagcacctccaggtcctgcccaagggcatcccc
aagaacgtcacggaactctacttggacgggaaccagttcacactggttccaggacagctg
tccaccttcaagtacctgcagcttgtggacttgagtaacaacaagatcagttccttaagc
aattcctccttcaccaacatgagccagctgaccactctgatcctcagctacaatgccctc
cagtgcatccctcctctcgccttccagggcctgcactccctgcgcctgctgtccctgcat
ggcaatgacatctccaccctcccagagggcatcttcacagacgtgacctccctgtctcac
ctggccatcggggccaaccctctgtactgcgactgccgcctccgctggctgtctggctgg
gtgaagaccggctataaggaaccgggcattgcccgctgtgcggggcccccggacatggag
ggcaagctgctcctcaccacgcctgccaagaagtttgaatgccaaggtccccccgccctg
gctgtccaggccaagtgtgatccctgcttgtccagcccgtgccagaaccagggcacctgc
cataatgacccccttgaggtgtacaggtgtgcctgctccagcagctacaagggccgaaac
tgcgaggtgtccctggacagctgttccagcggcccctgtggccacggcgggacctgccgc
tcgcaggagggcgagaatgccgggttcatgtgctcctgtcccaccggctatgaaggacca
acctgtgaggtgaatacggacgactgcgtggagcacccctgtgccaacgggggtgtctgt
gtggacggcgtgggcaactatagctgccggtgtcccctgcagtacacgggtaaggcctgt
gagcagctggtggacttctgctccccggatttgaacccatgtcagcacgaggcccagtgt
gtggggactccagacgggcccaggtgtgagtgtgcaccaggttacgcaggtgacaactgc
agtgagaaccaggatgactgcagggaccaccgctgccggcacggggcccagtgtgtggac
gaagtcaacagctactcttgcctctgtgcggagggctacagcgggcagttctgtgagtct
cctcccgcccccagaagcccctgcgaggggactgagtgccagaacggggccaactgcgtg
gaccagggcagtgggcctgtgtgccagtgcctcccaggcttcggcggccccgagtgcgag
aagctgctcagtgtcaactttgtggatcgggacacctacctgcagttcaccgacctgcag
aactggccccgggccaacatcacgctgcaggtctccacggcagaggacaacgggatcttg
ctgtacaatggggacaatgaccacatcgcagtggagctgtaccagggtcatgtgcgtgtc
agctacgatccaggcagctaccccagctctgccatctacagtgctgagacgatcaacgat
gggcagttccatactgttgagctggtcacctttgaccagatggtgaatctctccatcgat
ggaggcagtcccatgaccatggacaattttggcaaacactacacgctaaacagcgaggcc
cccctctacgtgggagggatgccagtggatgtgaactcagccgccttccgcctgtggcag
atcctcaacggcaccagcttccatggttgcatccgaaacctatacatcaacaacgagctg
caggacttcaccaagactcggatgaagccgggcgtggtgccaggctgtgagccctgccga
aagctctactgcctccacggcatctgccagcccagggccgctccggggcccgtgtgccat
tgtgaggccggctgggggggcctgcactgcgaccagccagcagacggcccctgccatggc
cacaagtgtgtccatggaaaatgtgtgcccctcgacgctctttcctacagctgccagtgc
caggatgggtactcaggggctctgtgcaaccaggctggggcacctgcagacccctgtggg
ggcctgcagtgcctgcatggccactgccaggccttggccaccaagggggcacactgtgtg
tgtgaccctggcttttcgggcgagctgtgtgagcaagagtccgagtgccggggctcccct
gtccgggactttcaccaggtccagaggggctatgccatctgccagaccacgcgcccgctg
tcgtgggtggagtgccggggctcatgtccagggcagggctgctgccagggcctgcggctg
aagcggaggaagttcacctttgagtgcagcgacgggacctcttttgcggaggaggtggag
aagcccaccaagtgtggctgcggcgtctgcgcctag
DBGET
integrated database retrieval system
